Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003502 Sechium edule HOM05D010872 ORTHO05D013672 4.3e-74 281.2 136 100.0
ClCG11G014290 Citrullus lanatus HOM05D026294 ORTHO05D004477 5.7e-18 94.7 155 39.4
Sed0027320 Sechium edule HOM05D026294 ORTHO05D004477 2.8e-17 92.4 155 43.2
Aa31LG6G8650 Aethionema arabicum HOM05D010872 ORTHO05D013672 4.4e-10 68.6 128 33.6
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 2.2e-09 66.2 133 36.8
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 2.8e-09 65.9 100 43.0
BcaC05g27742 Brassica carinata HOM05D010872 ORTHO05D013672 8.2e-09 64.3 136 33.1
C05p37280 Brassica napus HOM05D010872 ORTHO05D013672 8.2e-09 64.3 136 33.1
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.1e-08 63.9 153 34.0
CsaV3_3G047680 Cucumis sativus L. HOM05D026294 ORTHO05D004477 1.4e-08 63.5 64 54.7
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 1.8e-08 63.2 114 39.5
BolC5t32474H Brassica oleracea HOM05D010872 ORTHO05D013672 2.4e-08 62.8 136 35.3
BcaB03g13666 Brassica carinata HOM05D010872 ORTHO05D013672 3.1e-08 62.4 137 34.3
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 5.3e-08 61.6 145 31.0
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.5e-07 60.1 134 34.3
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.5e-07 60.1 125 38.4
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.0e-07 59.7 137 35.8
Carub.0001s3286 Capsella rubella HOM05D010872 ORTHO05D013672 2.0e-07 59.7 108 38.0
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 2.0e-07 59.7 161 32.3
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 2.0e-07 59.7 91 41.8
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 2.0e-07 59.7 45 64.4
AL1G49920 Arabidopsis lyrata HOM05D010872 ORTHO05D013672 3.4e-07 58.9 52 50.0
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 4.5e-07 58.5 46 65.2
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 4.5e-07 58.5 120 33.3
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 5.9e-07 58.2 68 52.9
THA.LOC104816630 Tarenaya hassleriana HOM05D010872 ORTHO05D013672 5.9e-07 58.2 122 32.0
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 7.7e-07 57.8 153 32.7
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 7.7e-07 57.8 106 34.9
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.0e-06 57.4 129 36.4
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.0e-06 57.4 149 32.2
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.0e-06 57.4 124 39.5
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 1.3e-06 57.0 46 63.0
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 1.3e-06 57.0 158 33.5
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.7e-06 56.6 129 36.4
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 2.2e-06 56.2 53 52.8
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 2.2e-06 56.2 134 35.8
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 2.2e-06 56.2 63 47.6
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.2e-06 56.2 126 35.7
CARHR287280 Cardamine hirsuta HOM05D010872 ORTHO05D013672 3.8e-06 55.5 36 63.9
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 3.8e-06 55.5 63 50.8
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 3.8e-06 55.5 71 45.1
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 5.0e-06 55.1 117 34.2
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 5.0e-06 55.1 76 46.1
AT1G35210 Arabidopsis thaliana HOM05D010872 ORTHO05D013672 6.5e-06 54.7 73 41.1
A05p23830 Brassica napus HOM05D010872 ORTHO05D013672 6.5e-06 54.7 105 33.3
BraA05t21254Z Brassica rapa HOM05D010872 ORTHO05D013672 6.5e-06 54.7 105 33.3
EL10Ac1g01145 Beta vulgaris HOM05D008046 ORTHO05D004477 8.5e-06 54.3 123 32.5
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 8.5e-06 54.3 27 81.5
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 8.5e-06 54.3 25 88.0
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 8.5e-06 54.3 25 88.0
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 8.5e-06 54.3 43 58.1
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 8.5e-06 54.3 58 51.7
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 8.5e-06 54.3 62 48.4
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 8.5e-06 54.3 134 31.3


User provided reference genes

Program Settings