Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 3.1e-149 531.9 305 100.0
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 2.9e-70 269.6 333 61.3
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 3.0e-67 259.6 334 60.8
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 6.0e-60 235.3 256 69.5
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 5.1e-43 179.1 354 46.6
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 6.7e-43 178.7 299 49.8
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 1.1e-42 177.9 301 48.2
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.1e-42 177.9 329 48.6
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 3.3e-42 176.4 331 47.7
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 3.3e-42 176.4 310 43.5
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 7.4e-42 175.3 298 49.3
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 9.7e-42 174.9 298 49.7
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 9.7e-42 174.9 323 47.4
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 9.7e-42 174.9 298 49.7
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 6.3e-41 172.2 156 78.8
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 8.2e-41 171.8 316 49.1
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 6.9e-40 168.7 301 41.9
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 6.9e-40 168.7 302 41.7
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 9.1e-40 168.3 301 42.2
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 9.1e-40 168.3 351 44.2
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.2e-39 167.9 323 45.8
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 1.5e-39 167.5 321 45.5
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 2.0e-39 167.2 331 47.7
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 3.4e-39 166.4 348 44.3
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 2.9e-38 163.3 319 48.6
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 5.0e-38 162.5 331 46.2
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 6.5e-38 162.2 330 43.6
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 8.5e-38 161.8 313 47.0
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 1.4e-37 161.0 319 47.0
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 3.2e-37 159.8 354 44.1
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 4.2e-37 159.5 301 46.8
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.2e-36 157.9 300 40.7
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 1.6e-36 157.5 293 46.4
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 6.1e-36 155.6 310 45.2
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 7.9e-36 155.2 307 46.3
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 7.9e-36 155.2 234 44.9
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 7.9e-36 155.2 302 47.7
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 8.8e-35 151.8 312 37.2
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 3.3e-34 149.8 330 37.0
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 5.7e-34 149.1 295 47.8
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 7.4e-34 148.7 294 48.0
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 9.7e-34 148.3 296 39.2
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 1.7e-33 147.5 299 45.8
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 2.2e-33 147.1 266 48.9
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.7e-33 146.4 278 48.6
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 3.7e-33 146.4 354 37.6
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 6.3e-33 145.6 280 47.5
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 8.2e-33 145.2 290 38.6
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.1e-32 144.8 294 46.9
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 2.4e-32 143.7 234 53.8
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 6.9e-32 142.1 319 42.0
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 6.9e-32 142.1 351 42.2
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 2.6e-31 140.2 305 43.0
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 3.4e-31 139.8 287 44.3
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 3.4e-31 139.8 320 35.0
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 4.5e-31 139.4 255 50.6
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 5.9e-31 139.0 265 49.1
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 5.0e-30 136.0 237 51.5
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 7.2e-29 132.1 247 49.0
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 2.1e-28 130.6 297 44.1
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 2.1e-28 130.6 289 45.0
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 3.6e-28 129.8 320 45.0
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 4.7e-28 129.4 240 49.6
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 6.1e-28 129.0 249 49.0
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 1.4e-27 127.9 284 39.8
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 2.0e-26 124.0 236 36.9
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 5.7e-26 122.5 239 37.2
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 4.1e-24 116.3 280 39.3
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 1.2e-23 114.8 294 40.8
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 2.0e-23 114.0 276 39.5
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 2.0e-23 114.0 309 34.0
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 5.9e-23 112.5 300 40.0
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 7.7e-23 112.1 289 38.4
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.1e-21 108.2 297 40.1
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 1.5e-21 107.8 286 31.5
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 1.2e-20 104.8 321 37.4
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.0e-19 101.7 290 31.0
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 3.0e-19 100.1 317 32.8
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 1.2e-18 98.2 284 37.7
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 3.3e-18 96.7 283 38.5
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 5.7e-18 95.9 299 35.1
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 1.7e-17 94.4 288 35.8
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 1.1e-16 91.7 276 36.2
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 1.1e-16 91.7 276 36.2
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 2.4e-16 90.5 276 35.5
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 2.4e-16 90.5 276 35.5
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 2.4e-16 90.5 245 31.0
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 7.0e-16 89.0 305 30.5
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.6e-15 87.8 239 32.2
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 5.5e-13 79.3 159 34.6
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 1.6e-12 77.8 231 32.0
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 3.0e-11 73.6 276 34.4
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 1.5e-10 71.2 279 25.4
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 1.5e-10 71.2 283 35.0
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 2.0e-10 70.9 283 35.0
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 4.8e-09 66.2 134 38.8
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 3.1e-08 63.5 205 34.6
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 2.7e-07 60.5 248 27.0
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 4.5e-07 59.7 285 25.6
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 1.7e-06 57.8 52 65.4


User provided reference genes

Program Settings