Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.6e-100 369.4 177 100.0
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 7.5e-79 297.4 166 84.3
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 4.3e-74 281.6 162 79.0
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 8.0e-73 277.3 165 78.8
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 8.3e-54 214.2 153 64.7
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.4e-53 213.4 163 62.0
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.9e-53 213.0 154 62.3
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 4.1e-53 211.8 155 63.2
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 5.4e-53 211.5 142 65.5
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 5.4e-53 211.5 152 62.5
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 9.2e-53 210.7 155 62.6
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 9.2e-53 210.7 156 64.1
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 9.2e-53 210.7 154 61.7
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.6e-52 209.9 154 61.7
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 3.5e-52 208.8 153 62.1
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.0e-52 208.0 157 62.4
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.3e-51 206.8 159 59.7
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.7e-51 206.5 167 59.3
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.3e-51 206.1 165 58.8
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.3e-51 206.1 154 60.4
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.3e-51 206.1 126 70.6
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.0e-51 205.7 151 62.9
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 3.0e-51 205.7 142 64.8
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 3.9e-51 205.3 154 63.0
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.9e-51 205.3 154 63.0
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 5.1e-51 204.9 158 60.1
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 5.1e-51 204.9 160 60.6
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 6.6e-51 204.5 126 69.8
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 8.6e-51 204.1 162 57.4
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 8.6e-51 204.1 159 58.5
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.1e-50 203.8 152 61.2
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.5e-50 203.4 138 62.3
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.9e-50 203.0 126 69.8
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.9e-50 203.0 148 61.5
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 1.9e-50 203.0 157 59.9
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.5e-50 202.6 163 58.3
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 2.5e-50 202.6 162 60.5
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 3.3e-50 202.2 163 58.3
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.3e-50 202.2 154 62.3
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 4.3e-50 201.8 126 69.8
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 5.6e-50 201.4 157 60.5
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 5.6e-50 201.4 150 61.3
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 5.6e-50 201.4 146 59.6
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 9.6e-50 200.7 150 59.3
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 9.6e-50 200.7 129 66.7
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.6e-49 199.9 145 60.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.6e-49 199.9 127 68.5
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 6.2e-49 198.0 126 67.5
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 6.2e-49 198.0 133 65.4
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 6.2e-49 198.0 142 59.9
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 6.2e-49 198.0 126 69.0
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 6.2e-49 198.0 170 56.5
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 8.1e-49 197.6 119 72.3
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.1e-48 197.2 150 59.3
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.4e-48 196.8 128 66.4
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.8e-48 196.4 166 56.6
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.4e-48 196.1 166 56.6
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 6.8e-48 194.5 143 60.1
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 6.8e-48 194.5 126 65.9
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.2e-47 193.7 118 70.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.0e-47 193.0 164 56.1
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 3.4e-47 192.2 167 56.3
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 4.4e-47 191.8 166 55.4
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 5.8e-47 191.4 170 55.9
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 7.6e-47 191.0 166 57.2
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 7.6e-47 191.0 165 55.2
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.3e-46 190.3 163 55.8
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.2e-46 189.5 168 56.0
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 2.2e-46 189.5 169 56.2
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 8.4e-46 187.6 166 54.8
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 2.4e-45 186.0 126 65.1
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 7.1e-45 184.5 139 57.6
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 5.1e-43 178.3 165 54.5
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 5.1e-43 178.3 147 54.4
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 2.5e-42 176.0 164 54.3
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 3.3e-42 175.6 142 58.5
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 7.3e-42 174.5 140 55.7
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 8.1e-41 171.0 108 67.6
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 9.0e-40 167.5 124 61.3
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 2.0e-39 166.4 153 50.3
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.4e-37 159.5 109 60.6
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 7.1e-37 157.9 115 57.4
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.7e-35 153.3 136 53.7
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.9e-35 152.1 156 44.2
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 8.7e-35 151.0 117 55.6
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 5.6e-34 148.3 136 55.1
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 9.6e-34 147.5 147 48.3
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 5.3e-32 141.7 147 46.9
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 5.3e-32 141.7 163 47.2
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 5.3e-32 141.7 159 42.1
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 3.4e-31 139.0 87 69.0
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 4.5e-31 138.7 158 45.6
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 5.8e-31 138.3 123 53.7
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 3.8e-30 135.6 158 44.9
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.3e-27 126.3 87 62.1
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 2.1e-25 119.8 87 59.8
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.1e-16 90.9 75 54.7
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.2e-15 87.4 61 62.3
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 4.5e-15 85.5 78 56.4
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.1e-12 76.6 165 31.5
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.8e-11 73.6 52 65.4


User provided reference genes

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