Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 4.7e-245 850.9 475 100.0
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 4.8e-205 718.0 477 84.7
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 4.5e-203 711.4 477 84.3
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 7.4e-190 667.5 496 77.4
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 3.8e-178 628.6 477 68.3
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 4.2e-177 625.2 478 67.2
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 4.7e-176 621.7 478 68.4
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 6.1e-176 621.3 478 67.8
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 7.9e-176 620.9 474 67.9
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 2.3e-175 619.4 478 67.8
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.9e-175 618.6 479 67.2
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.9e-175 618.6 474 67.9
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 1.6e-171 606.7 478 66.5
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 2.0e-171 606.3 478 66.1
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 5.9e-171 604.7 478 66.1
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 5.0e-170 601.7 478 65.9
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 6.5e-170 601.3 477 65.8
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 6.5e-170 601.3 478 65.9
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 8.5e-170 600.9 471 66.9
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 8.5e-170 600.9 478 65.9
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.1e-169 600.5 472 66.9
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 1.1e-169 600.5 478 65.7
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.5e-169 600.1 478 65.7
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 1.5e-169 600.1 514 62.6
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.9e-169 599.7 478 66.1
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 3.2e-169 599.0 476 65.8
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 3.2e-169 599.0 479 68.9
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 7.2e-169 597.8 470 66.2
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 1.6e-168 596.7 478 65.1
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 1.6e-168 596.7 477 65.6
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 2.1e-168 596.3 478 66.1
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 8.0e-168 594.3 477 69.6
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.4e-167 593.6 478 64.2
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.8e-167 593.2 478 65.3
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 5.2e-167 591.7 472 66.3
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 5.2e-167 591.7 471 66.5
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 6.7e-167 591.3 479 66.0
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 1.2e-166 590.5 475 65.3
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 5.7e-166 588.2 478 65.3
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 1.7e-165 586.6 477 64.4
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 1.8e-164 583.2 476 65.5
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.4e-164 582.8 478 63.8
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.4e-164 582.8 478 63.8
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 2.4e-164 582.8 496 63.5
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 9.1e-164 580.9 478 63.4
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 2.7e-163 579.3 478 64.0
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 4.5e-163 578.6 482 64.3
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 7.7e-163 577.8 479 66.6
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 1.0e-162 577.4 478 64.0
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 5.0e-162 575.1 477 65.8
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 1.1e-161 573.9 474 63.7
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 1.9e-161 573.2 477 63.3
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 2.5e-161 572.8 477 63.3
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 4.2e-161 572.0 473 64.1
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 9.4e-161 570.9 484 62.8
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.2e-160 570.5 472 62.9
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 2.1e-160 569.7 484 62.6
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 2.7e-160 569.3 477 62.7
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 3.6e-160 568.9 477 63.5
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 4.7e-160 568.5 477 63.3
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 4.7e-160 568.5 477 63.1
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 6.1e-160 568.2 473 63.4
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 6.1e-160 568.2 483 62.5
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 1.8e-159 566.6 477 62.9
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 3.0e-159 565.8 478 62.8
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 4.0e-159 565.5 510 59.0
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 1.5e-158 563.5 476 62.8
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 4.4e-158 562.0 475 62.7
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 1.3e-157 560.5 478 63.2
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 1.7e-157 560.1 472 61.4
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 8.3e-157 557.8 474 61.4
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 8.3e-157 557.8 474 61.4
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 8.3e-157 557.8 474 61.4
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 1.1e-156 557.4 475 63.4
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.4e-156 557.0 474 61.6
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 9.1e-156 554.3 474 61.8
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 1.6e-155 553.5 474 61.0
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 2.0e-155 553.1 476 62.0
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 1.3e-154 550.4 474 61.0
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 5.0e-154 548.5 474 61.0
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 8.0e-152 541.2 422 67.1
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 6.8e-151 538.1 474 61.0
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 3.4e-150 535.8 474 60.1
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 1.3e-149 533.9 478 61.1
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 8.6e-146 521.2 527 56.5
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 8.0e-144 514.6 422 64.0
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 4.0e-143 512.3 470 59.8
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 4.4e-142 508.8 473 58.8
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.4e-140 503.8 421 62.7
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 1.4e-140 503.8 486 57.8
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 4.6e-139 498.8 487 58.9
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 1.3e-138 497.3 441 62.1
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 3.9e-138 495.7 476 57.4
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 1.4e-135 487.3 363 70.0
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.8e-135 486.9 484 55.8
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 5.2e-135 485.3 475 56.4
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 2.0e-134 483.4 381 68.0
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.0e-134 483.4 376 66.8
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 8.3e-133 478.0 483 54.0
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.1e-132 477.6 574 48.8
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 5.6e-129 465.3 443 58.5
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 2.0e-126 456.8 378 63.2
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.9e-117 425.6 310 71.6
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.2e-115 421.0 476 50.8
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.0e-114 417.9 344 63.1
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 8.6e-114 414.8 339 63.4
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.1e-113 414.5 308 70.1
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 8.1e-104 381.7 447 49.9
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 5.3e-103 379.0 447 49.4
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.1e-100 371.3 447 48.5
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 4.2e-100 369.4 443 52.1
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.2e-99 367.9 443 47.4
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 3.5e-99 366.3 448 47.8
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 3.9e-98 362.8 448 46.9
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 3.3e-97 359.8 376 50.3
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 9.0e-95 351.7 465 45.2
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 2.9e-93 346.7 468 44.2
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 1.2e-91 341.3 808 32.7
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 4.6e-91 339.3 449 46.1
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 3.3e-89 333.2 370 50.5
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 9.6e-89 331.6 369 49.9
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 6.9e-87 325.5 246 69.5
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 1.5e-81 307.8 442 41.4
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 2.4e-79 300.4 407 43.0
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 5.0e-77 292.7 448 42.9
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.4e-76 291.2 406 42.6
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 2.3e-74 283.9 492 37.8
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 2.1e-67 260.8 228 58.8
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 8.8e-66 255.4 489 36.8
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 1.8e-63 247.7 240 54.6
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 3.9e-58 229.9 307 44.3
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 2.7e-51 207.2 250 46.0
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 3.3e-49 200.3 199 55.8
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 3.8e-37 160.2 429 28.4
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 4.7e-35 153.3 511 27.8
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.5e-33 148.3 176 48.3
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 5.7e-33 146.4 203 41.4
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 2.0e-30 137.9 100 69.0
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.3e-28 130.6 104 67.3
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 8.6e-13 79.3 76 47.4
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 7.1e-07 59.7 62 59.7
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 7.8e-06 56.2 142 25.4


User provided reference genes

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