Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 3.9e-84 314.7 154 100.0
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 3.0e-47 192.2 156 67.3
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 1.2e-37 160.2 147 59.9
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 2.2e-34 149.4 114 68.4
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 6.4e-26 121.3 135 51.1
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 8.1e-21 104.4 162 37.0
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 9.0e-20 100.9 154 38.3
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 2.2e-18 96.3 162 36.4
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.9e-18 95.1 159 39.6
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 8.4e-18 94.4 164 36.6
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 8.4e-18 94.4 156 35.9
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.4e-17 93.6 161 36.0
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.4e-17 93.6 159 37.7
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.9e-17 93.2 163 38.7
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.9e-17 93.2 165 37.0
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.9e-17 93.2 154 37.7
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 4.2e-17 92.0 164 37.2
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 5.4e-17 91.7 170 38.2
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 5.4e-17 91.7 157 40.1
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 7.1e-17 91.3 154 40.3
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 7.1e-17 91.3 159 39.6
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 7.1e-17 91.3 156 36.5
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 9.3e-17 90.9 163 36.8
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 9.3e-17 90.9 159 37.7
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 9.3e-17 90.9 160 40.6
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 9.3e-17 90.9 160 38.1
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.2e-16 90.5 155 38.1
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.2e-16 90.5 160 38.8
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.2e-16 90.5 165 37.6
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 1.6e-16 90.1 155 38.1
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.6e-16 90.1 163 40.5
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 1.6e-16 90.1 170 34.7
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 2.1e-16 89.7 163 36.8
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 3.5e-16 89.0 159 34.0
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 3.5e-16 89.0 170 37.1
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 6.0e-16 88.2 160 38.1
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 6.0e-16 88.2 160 37.5
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 6.0e-16 88.2 152 43.4
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 7.9e-16 87.8 105 41.9
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 7.9e-16 87.8 156 36.5
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 7.9e-16 87.8 162 36.4
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 1.3e-15 87.0 113 39.8
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 3.0e-15 85.9 163 36.2
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 3.9e-15 85.5 158 36.7
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 5.1e-15 85.1 169 33.1
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 5.1e-15 85.1 172 33.1
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 1.1e-14 84.0 159 35.8
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 1.9e-14 83.2 154 38.3
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 3.3e-14 82.4 162 34.0
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 4.3e-14 82.0 157 36.3
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 5.6e-14 81.6 155 35.5
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 7.3e-14 81.3 160 35.0
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 7.3e-14 81.3 160 34.4
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 2.1e-13 79.7 166 32.5
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 2.1e-13 79.7 123 39.8
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 3.6e-13 79.0 180 36.1
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 6.2e-13 78.2 148 33.8
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 6.2e-13 78.2 145 35.9
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 8.1e-13 77.8 165 35.8
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 8.1e-13 77.8 61 57.4
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 1.1e-12 77.4 119 38.7
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.8e-12 76.6 63 57.1
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 6.9e-12 74.7 160 33.1
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 1.2e-11 73.9 162 32.7
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 1.2e-11 73.9 162 32.7
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 1.2e-11 73.9 153 32.7
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 2.0e-11 73.2 168 32.7
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 2.0e-11 73.2 168 32.7
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 2.0e-11 73.2 168 32.7
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.0e-11 73.2 167 32.3
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 2.6e-11 72.8 180 33.9
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 3.4e-11 72.4 179 36.3
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 4.5e-11 72.0 162 32.1
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 4.5e-11 72.0 65 53.8
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 1.3e-10 70.5 161 34.2
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 2.2e-10 69.7 160 35.6
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 2.9e-10 69.3 174 34.5
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 2.9e-10 69.3 119 39.5
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 3.8e-10 68.9 160 34.4
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 4.9e-10 68.6 167 34.1
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 6.4e-10 68.2 120 38.3
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 1.1e-09 67.4 67 49.3
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 1.1e-09 67.4 66 50.0
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 2.4e-09 66.2 122 36.9
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 3.2e-09 65.9 171 33.3
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 3.2e-09 65.9 161 31.7
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 3.2e-09 65.9 79 51.9
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 4.2e-09 65.5 97 42.3
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 4.2e-09 65.5 62 48.4
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 5.5e-09 65.1 65 53.8
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 9.3e-09 64.3 164 35.4
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 2.7e-08 62.8 173 30.1
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 7.9e-08 61.2 129 34.9
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 7.9e-08 61.2 37 73.0
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 1.8e-07 60.1 122 32.0
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 3.0e-07 59.3 63 49.2
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 3.0e-07 59.3 172 29.7
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 3.0e-07 59.3 33 69.7
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 3.9e-07 58.9 169 30.2
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.1e-06 57.4 32 68.8
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 1.5e-06 57.0 122 31.1


User provided reference genes

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