Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003235 Sechium edule HOM05D007156 ORTHO05D003871 4.5e-53 211.1 112 100.0
ClCG02G011170 Citrullus lanatus HOM05D007156 ORTHO05D003871 1.3e-28 129.8 104 70.2
CsaV3_6G012600 Cucumis sativus L. HOM05D007156 ORTHO05D003871 1.1e-22 110.2 104 63.5
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 3.1e-14 82.0 94 51.1
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.9e-12 75.5 114 48.2
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 6.5e-12 74.3 55 70.9
CsaV3_7G003930 Cucumis sativus L. HOM05D007156 ORTHO05D003871 1.1e-11 73.6 85 48.2
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.5e-11 73.2 75 57.3
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 2.5e-11 72.4 116 44.0
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 5.5e-11 71.2 71 57.7
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 7.2e-11 70.9 52 69.2
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 7.2e-11 70.9 118 40.7
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 7.2e-11 70.9 114 46.5
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 7.2e-11 70.9 114 46.5
Psat5g266920 Pisum sativum HOM05D007156 ORTHO05D003871 7.2e-11 70.9 97 45.4
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 1.2e-10 70.1 49 67.3
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 1.2e-10 70.1 94 47.9
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.2e-10 70.1 51 68.6
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.2e-10 70.1 51 68.6
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 2.1e-10 69.3 104 47.1
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 2.1e-10 69.3 67 53.7
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 2.7e-10 68.9 66 56.1
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 3.6e-10 68.6 112 41.1
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 3.6e-10 68.6 58 60.3
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 4.7e-10 68.2 53 64.2
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 6.1e-10 67.8 66 57.6
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 8.0e-10 67.4 121 40.5
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 1.0e-09 67.0 101 47.5
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 1.0e-09 67.0 112 40.2
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 1.0e-09 67.0 47 70.2
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 1.0e-09 67.0 50 68.0
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 1.0e-09 67.0 101 46.5
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 1.4e-09 66.6 48 64.6
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 1.4e-09 66.6 50 68.0
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 1.8e-09 66.2 115 41.7
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 1.8e-09 66.2 108 43.5
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 2.3e-09 65.9 106 41.5
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 4.0e-09 65.1 118 41.5
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 4.0e-09 65.1 118 41.5
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 5.2e-09 64.7 118 41.5
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 5.2e-09 64.7 125 37.6
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 5.2e-09 64.7 73 52.1
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 6.8e-09 64.3 107 42.1
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 6.8e-09 64.3 48 62.5
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 6.8e-09 64.3 52 63.5
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 6.8e-09 64.3 103 43.7
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 8.8e-09 63.9 62 51.6
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.2e-08 63.5 101 42.6
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 1.5e-08 63.2 52 59.6
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 2.0e-08 62.8 57 56.1
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 2.0e-08 62.8 61 55.7
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 2.0e-08 62.8 111 43.2
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 2.0e-08 62.8 55 60.0
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 2.6e-08 62.4 57 52.6
Sed0001937 Sechium edule HOM05D007156 ORTHO05D003871 2.6e-08 62.4 86 45.3
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 3.4e-08 62.0 113 40.7
MD09G1127500 Malus domestica HOM05D007156 ORTHO05D003871 3.4e-08 62.0 107 41.1
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 9.8e-08 60.5 42 71.4
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 1.7e-07 59.7 107 41.1
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.2e-07 59.3 60 53.3
Gohir.A04G106700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 3.7e-07 58.5 46 67.4
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 3.7e-07 58.5 53 54.7
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 3.7e-07 58.5 57 52.6
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 6.3e-07 57.8 125 37.6
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 6.3e-07 57.8 57 56.1
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 8.3e-07 57.4 51 52.9
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 1.1e-06 57.0 106 37.7
Sabra04G0016700 Salix brachista HOM05D007156 ORTHO05D003871 1.1e-06 57.0 48 58.3
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.4e-06 56.6 44 63.6
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 1.8e-06 56.2 58 51.7
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 2.4e-06 55.8 49 53.1
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 2.4e-06 55.8 68 44.1
Peaxi162Scf00007g00157 Petunia axillaris HOM05D007156 ORTHO05D003871 3.1e-06 55.5 53 54.7
unitig_899.g15247 Utricularia gibba HOM05D007156 ORTHO05D003871 4.1e-06 55.1 54 50.0
Thhalv10021969m.g Eutrema salsugineum HOM05D007866 ORTHO05D003871 5.4e-06 54.7 99 38.4
Gohir.D02G185700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 5.4e-06 54.7 52 57.7
Gorai.005G208200 Gossypium raimondii HOM05D007156 ORTHO05D003871 5.4e-06 54.7 52 57.7
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 7.0e-06 54.3 34 70.6
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 9.1e-06 53.9 51 52.9
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 9.1e-06 53.9 52 51.9


User provided reference genes

Program Settings