Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003029 Sechium edule HOM05D001626 ORTHO05D001563 1.1e-71 273.1 134 100.0
ClCG08G006630 Citrullus lanatus HOM05D001626 ORTHO05D001563 8.6e-11 70.9 130 37.7
CsaV3_6G029690 Cucumis sativus L. HOM05D001626 ORTHO05D001563 1.4e-08 63.5 57 50.9
CsaV3_6G030780 Cucumis sativus L. HOM05D001626 ORTHO05D001563 5.2e-08 61.6 48 54.2
Hund26712 Selenicereus undatus HOM05D001626 ORTHO05D001563 5.2e-08 61.6 60 50.0
Duzib041G0287 Durio zibethinus HOM05D001626 ORTHO05D001563 1.2e-07 60.5 61 47.5
Phvul.004G098400 Phaseolus vulgaris HOM05D001626 ORTHO05D001563 1.2e-07 60.5 60 51.7
Thhalv10008603m.g Eutrema salsugineum HOM05D001626 ORTHO05D001563 1.5e-07 60.1 46 58.7
BcaB03g12822 Brassica carinata HOM05D001626 ORTHO05D001563 2.6e-07 59.3 46 58.7
TAR381G1527 Trochodendron aralioides HOM05D001626 ORTHO05D001563 2.6e-07 59.3 53 50.9
Actinidia15146 Actinidia chinensis HOM05D001626 ORTHO05D001563 3.4e-07 58.9 54 48.1
Glyma.16G170200 Glycine max HOM05D001626 ORTHO05D001563 3.4e-07 58.9 60 51.7
Gohir.A02G112703 Gossypium hirsutum HOM05D001626 ORTHO05D001563 3.4e-07 58.9 60 48.3
Gohir.D03G060609 Gossypium hirsutum HOM05D001626 ORTHO05D001563 3.4e-07 58.9 60 48.3
Gorai.002G055200 Gossypium raimondii HOM05D001626 ORTHO05D001563 3.4e-07 58.9 60 48.3
Potri.002G070200 Populus trichocarpa HOM05D001626 ORTHO05D001563 3.4e-07 58.9 60 50.0
Sabra02G0054800 Salix brachista HOM05D001626 ORTHO05D001563 3.4e-07 58.9 60 50.0
Thecc.08G148600 Theobroma cacao HOM05D001626 ORTHO05D001563 3.4e-07 58.9 54 48.1
CANSAT25G3733 Cannabis sativa HOM05D001626 ORTHO05D001563 4.4e-07 58.5 57 50.9
Gohir.D05G271800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 4.4e-07 58.5 60 46.7
Gorai.009G284800 Gossypium raimondii HOM05D001626 ORTHO05D001563 4.4e-07 58.5 60 46.7
Lalb_Chr01g0009651 Lupinus albus HOM05D001626 ORTHO05D001563 4.4e-07 58.5 53 50.9
VMungo0464G0210 Vigna mungo HOM05D001626 ORTHO05D001563 4.4e-07 58.5 60 50.0
Prupe.8G024700 Prunus persica HOM05D001626 ORTHO05D001563 5.8e-07 58.2 60 48.3
TPR.G10134 Trifolium pratense HOM05D001626 ORTHO05D001563 5.8e-07 58.2 60 51.7
Haze_17738 Corylus avellana HOM05D001626 ORTHO05D001563 7.6e-07 57.8 60 48.3
FvH4_2g14240 Fragaria vesca HOM05D001626 ORTHO05D001563 7.6e-07 57.8 60 48.3
FAN20G1329 Fragaria x ananassa HOM05D001626 ORTHO05D001563 7.6e-07 57.8 60 48.3
CiPaw.16G014700 Carya illinoinensis HOM05D001626 ORTHO05D001563 9.9e-07 57.4 60 46.7
Glyma.02G083800 Glycine max HOM05D001626 ORTHO05D001563 9.9e-07 57.4 60 50.0
Lalb_Chr03g0035191 Lupinus albus HOM05D001626 ORTHO05D001563 9.9e-07 57.4 46 54.3
Medtr1g099190 Medicago truncatula HOM05D001626 ORTHO05D001563 9.9e-07 57.4 48 52.1
THA.LOC104812049 Tarenaya hassleriana HOM05D001626 ORTHO05D001563 9.9e-07 57.4 46 54.3
arahy.Tifrunner.gnm1.ann1.I44A19 Arachis hypogaea HOM05D001626 ORTHO05D001563 1.3e-06 57.0 46 56.5
Duzib116G0253 Durio zibethinus HOM05D001626 ORTHO05D001563 1.3e-06 57.0 46 54.3
Gohir.A05G242400 Gossypium hirsutum HOM05D001626 ORTHO05D001563 1.3e-06 57.0 60 45.0
Gohir.D05G243800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 1.3e-06 57.0 60 45.0
Gorai.009G253100 Gossypium raimondii HOM05D001626 ORTHO05D001563 1.3e-06 57.0 60 45.0
RcHm_v2.0_Chr6g0276391 Rosa chinensis HOM05D001626 ORTHO05D001563 1.3e-06 57.0 60 48.3
arahy.Tifrunner.gnm1.ann1.2XQ85E Arachis hypogaea HOM05D001626 ORTHO05D001563 1.7e-06 56.6 66 45.5
DCAR_010242 Daucus carota HOM05D001626 ORTHO05D001563 1.7e-06 56.6 59 45.8
Gohir.A05G269800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 1.7e-06 56.6 59 45.8
Medtr6g034835 Medicago truncatula HOM05D001626 ORTHO05D001563 1.7e-06 56.6 46 54.3
PSO135G0440 Papaver somniferum HOM05D001626 ORTHO05D001563 1.7e-06 56.6 60 48.3
Psat6g194000 Pisum sativum HOM05D001626 ORTHO05D001563 1.7e-06 56.6 46 56.5
TPR.G36612 Trifolium pratense HOM05D001626 ORTHO05D001563 1.7e-06 56.6 46 54.3
AT1G21320 Arabidopsis thaliana HOM05D001626 ORTHO05D001563 2.2e-06 56.2 46 54.3
BcaB03g14274 Brassica carinata HOM05D001626 ORTHO05D001563 2.2e-06 56.2 46 54.3
BraA07t29260Z Brassica rapa HOM05D001626 ORTHO05D001563 2.2e-06 56.2 46 54.3
Oeu025466.3 Olea europaea HOM05D001626 ORTHO05D001563 2.2e-06 56.2 46 52.2
Sp1g18870 Schrenkiella parvula HOM05D001626 ORTHO05D001563 2.2e-06 56.2 46 54.3
arahy.Tifrunner.gnm1.ann1.1AX7R1 Arachis hypogaea HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
arahy.Tifrunner.gnm1.ann1.QV7ZPL Arachis hypogaea HOM05D001626 ORTHO05D001563 2.9e-06 55.8 60 48.3
BcaB07g32118 Brassica carinata HOM05D001626 ORTHO05D001563 2.9e-06 55.8 48 52.1
BcaC08g47194 Brassica carinata HOM05D001626 ORTHO05D001563 2.9e-06 55.8 47 51.1
A07p42520 Brassica napus HOM05D001626 ORTHO05D001563 2.9e-06 55.8 47 51.1
C06p51080 Brassica napus HOM05D001626 ORTHO05D001563 2.9e-06 55.8 47 51.1
BolC6t40132H Brassica oleracea HOM05D001626 ORTHO05D001563 2.9e-06 55.8 47 51.1
BraA07t31776Z Brassica rapa HOM05D001626 ORTHO05D001563 2.9e-06 55.8 47 51.1
AUR62013543 Chenopodium quinoa HOM05D001626 ORTHO05D001563 2.9e-06 55.8 54 48.1
Ciclev10002251m.g Citrus clementina HOM05D001626 ORTHO05D001563 2.9e-06 55.8 42 57.1
Glyma.10G226600 Glycine max HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
Glyma.10G226700 Glycine max HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
Glyma.20G165600 Glycine max HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
Glyma.20G165700 Glycine max HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
Phvul.007G078500 Phaseolus vulgaris HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
VMungo0720G0482 Vigna mungo HOM05D001626 ORTHO05D001563 2.9e-06 55.8 46 54.3
BcaC06g34872 Brassica carinata HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 54.3
A07p15200 Brassica napus HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 54.3
C07p22320 Brassica napus HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 54.3
BolC7t42762H Brassica oleracea HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 54.3
CSS0019772 Camellia sinensis var. sinensis HOM05D001626 ORTHO05D001563 3.8e-06 55.5 53 45.3
Ca_19928_v3 Cicer arietinum L. HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 54.3
Lj2g0006895 Lotus japonicus HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 52.2
Lj2g0024137 Lotus japonicus HOM05D001626 ORTHO05D001563 3.8e-06 55.5 46 52.2
Actinidia38430 Actinidia chinensis HOM05D000874 ORTHO05D001049 4.9e-06 55.1 50 50.0
MSTRG.8633 Avicennia marina HOM05D001626 ORTHO05D001563 4.9e-06 55.1 46 58.7
CSS0035605 Camellia sinensis var. sinensis HOM05D001626 ORTHO05D001563 4.9e-06 55.1 60 45.0
THA.LOC104802330 Tarenaya hassleriana HOM05D001626 ORTHO05D001563 4.9e-06 55.1 46 52.2
THA.LOC104813704 Tarenaya hassleriana HOM05D001626 ORTHO05D001563 4.9e-06 55.1 46 52.2
TAR374G1327 Trochodendron aralioides HOM05D001626 ORTHO05D001563 4.9e-06 55.1 60 48.3
Carub.0002s2380 Capsella rubella HOM05D001626 ORTHO05D001563 6.4e-06 54.7 46 52.2
Thhalv10019060m.g Eutrema salsugineum HOM05D001626 ORTHO05D001563 6.4e-06 54.7 46 52.2
MD05G1020700 Malus domestica HOM05D001626 ORTHO05D001563 6.4e-06 54.7 46 52.2
Sp5g32060 Schrenkiella parvula HOM05D001626 ORTHO05D001563 6.4e-06 54.7 46 52.2
Ah.13g070540 Amaranthus hybridus HOM05D001626 ORTHO05D001563 8.4e-06 54.3 44 56.8
Eucgr.F02718 Eucalyptus grandis HOM05D001626 ORTHO05D001563 8.4e-06 54.3 60 43.3
Manes.02G177500 Manihot esculenta HOM05D001626 ORTHO05D001563 8.4e-06 54.3 46 47.8
Nn1g06131 Nelumbo nucifera HOM05D001626 ORTHO05D001563 8.4e-06 54.3 46 52.2
unitig_578.g16674 Utricularia gibba HOM05D001626 ORTHO05D001563 8.4e-06 54.3 60 46.7


User provided reference genes

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