Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 7.2e-80 300.4 144 100.0
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 1.0e-62 243.4 132 87.9
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 5.7e-61 237.7 132 84.1
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 7.5e-61 237.3 132 84.8
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 4.7e-55 218.0 132 78.8
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 2.6e-45 185.7 127 67.7
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 2.9e-44 182.2 122 69.7
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 6.4e-44 181.0 122 69.7
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 3.2e-43 178.7 116 70.7
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 3.2e-43 178.7 132 65.9
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 3.2e-43 178.7 131 64.1
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 5.4e-43 177.9 116 70.7
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 9.2e-43 177.2 116 69.8
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 2.1e-42 176.0 111 73.9
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 3.5e-42 175.3 125 66.4
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 3.5e-42 175.3 126 65.9
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 3.5e-42 175.3 115 72.2
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 6.0e-42 174.5 113 72.6
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 3.9e-41 171.8 115 68.7
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 8.6e-41 170.6 125 62.4
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 8.6e-41 170.6 134 61.9
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 1.9e-40 169.5 113 65.5
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 1.9e-40 169.5 145 58.6
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 2.5e-40 169.1 112 67.0
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 2.5e-40 169.1 102 72.5
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 3.3e-40 168.7 112 70.5
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 3.3e-40 168.7 111 70.3
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 5.6e-40 167.9 110 69.1
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 5.6e-40 167.9 119 64.7
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 5.6e-40 167.9 119 64.7
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 5.6e-40 167.9 97 74.2
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 9.5e-40 167.2 115 65.2
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 9.5e-40 167.2 115 65.2
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 1.6e-39 166.4 123 60.2
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 1.6e-39 166.4 106 67.0
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 1.6e-39 166.4 105 67.6
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 2.1e-39 166.0 119 63.9
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 2.1e-39 166.0 105 69.5
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 2.8e-39 165.6 117 62.4
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 2.8e-39 165.6 105 67.6
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 2.8e-39 165.6 113 65.5
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 3.6e-39 165.2 120 66.7
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 4.7e-39 164.9 114 68.4
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 6.2e-39 164.5 116 64.7
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 6.2e-39 164.5 116 64.7
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 1.1e-38 163.7 115 62.6
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 1.1e-38 163.7 112 66.1
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 1.1e-38 163.7 126 58.7
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.4e-38 163.3 116 63.8
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.4e-38 163.3 116 63.8
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 1.4e-38 163.3 111 63.1
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 1.4e-38 163.3 122 61.5
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 1.8e-38 162.9 120 60.8
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 1.8e-38 162.9 98 71.4
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 2.3e-38 162.5 124 60.5
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 3.1e-38 162.2 109 67.0
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 4.0e-38 161.8 124 60.5
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 2.0e-37 159.5 114 64.0
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 2.0e-37 159.5 124 59.7
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 2.6e-37 159.1 99 68.7
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 3.4e-37 158.7 114 66.7
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 3.4e-37 158.7 114 66.7
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 3.4e-37 158.7 114 66.7
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 5.8e-37 157.9 94 73.4
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 2.2e-36 156.0 113 64.6
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 2.9e-36 155.6 115 61.7
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 2.9e-36 155.6 133 58.6
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 6.4e-36 154.5 116 61.2
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 1.1e-35 153.7 114 58.8
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 1.1e-35 153.7 114 59.6
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.1e-35 153.7 95 70.5
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 1.4e-35 153.3 86 75.6
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.4e-35 152.5 127 59.8
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 3.2e-35 152.1 114 59.6
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 3.2e-35 152.1 106 66.0
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.2e-35 152.1 114 64.9
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 5.4e-35 151.4 89 73.0
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 1.2e-34 150.2 116 59.5
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 1.6e-34 149.8 110 60.9
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 4.6e-34 148.3 138 53.6
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 3.9e-33 145.2 110 57.3
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 6.6e-33 144.4 98 70.4
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 1.2e-31 140.2 102 62.7
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 3.6e-31 138.7 105 63.8
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 6.8e-30 134.4 102 60.8
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 2.0e-29 132.9 99 60.6
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 3.4e-29 132.1 101 60.4
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 4.4e-29 131.7 117 53.8
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 5.8e-29 131.3 103 63.1
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 2.9e-28 129.0 100 62.0
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 6.4e-28 127.9 108 59.3
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 5.4e-27 124.8 94 66.0
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 2.7e-26 122.5 111 55.0
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 4.6e-26 121.7 94 64.9
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.9e-25 118.6 116 50.0
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 5.1e-25 118.2 103 53.4
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 5.6e-24 114.8 115 46.1
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 9.0e-22 107.5 80 51.2
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.5e-21 106.7 85 56.5
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 4.4e-21 105.1 82 56.1
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 2.2e-20 102.8 57 75.4
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 2.2e-20 102.8 103 46.6
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 4.9e-20 101.7 74 56.8
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 2.3e-17 92.8 53 69.8
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 1.3e-12 77.0 43 76.7
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 4.6e-10 68.6 57 56.1
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 7.9e-10 67.8 98 35.7
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.5e-08 63.5 78 38.5
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 3.7e-07 58.9 63 39.7
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 3.7e-07 58.9 63 41.3
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 1.8e-06 56.6 37 70.3


User provided reference genes

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