Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002977 Sechium edule HOM05D005150 ORTHO05D006070 5.1e-48 194.1 101 100.0
ClCG02G009450 Citrullus lanatus HOM05D005150 ORTHO05D006070 8.8e-24 113.6 109 60.6
MELO3C019368.2 Cucumis melo HOM05D005150 ORTHO05D006070 2.4e-21 105.5 108 54.6
Sed0014772 Sechium edule HOM05D005150 ORTHO05D006070 3.1e-21 105.1 110 55.5
CsaV3_6G009360 Cucumis sativus L. HOM05D005150 ORTHO05D006070 4.5e-20 101.3 109 54.1
Sabra14G0124000 Salix brachista HOM05D005150 ORTHO05D006070 1.6e-12 76.3 109 44.0
Manes.13G063792 Manihot esculenta HOM05D005150 ORTHO05D006070 4.5e-12 74.7 115 40.9
Manes.12G062667 Manihot esculenta HOM05D005150 ORTHO05D006070 2.2e-11 72.4 109 41.3
Manes.12G062700 Manihot esculenta HOM05D005150 ORTHO05D006070 2.2e-11 72.4 109 41.3
Glyma.14G039800 Glycine max HOM05D005150 ORTHO05D006070 3.8e-11 71.6 105 41.0
HanXRQChr10g0306371 Helianthus annuus HOM05D005150 ORTHO05D006070 5.0e-11 71.2 107 41.1
Haze_12715 Corylus avellana HOM05D005150 ORTHO05D006070 6.5e-11 70.9 105 44.8
Cfa014266 Carpinus fangiana HOM05D005150 ORTHO05D006070 1.9e-10 69.3 105 43.8
Lj6g0009976 Lotus japonicus HOM05D005150 ORTHO05D006070 1.9e-10 69.3 111 41.4
QL08p029214 Quercus lobata HOM05D005150 ORTHO05D006070 1.9e-10 69.3 109 42.2
ClCG02G002530 Citrullus lanatus HOM05D005150 ORTHO05D006070 2.5e-10 68.9 114 43.0
ClCG02G002570 Citrullus lanatus HOM05D005150 ORTHO05D006070 2.5e-10 68.9 114 43.0
Potri.014G162400 Populus trichocarpa HOM05D005150 ORTHO05D006070 2.5e-10 68.9 109 41.3
MELO3C018891.2 Cucumis melo HOM05D005150 ORTHO05D006070 3.2e-10 68.6 112 41.1
CsaV3_7G002850 Cucumis sativus L. HOM05D005150 ORTHO05D006070 5.5e-10 67.8 111 41.4
Potri.002G222900 Populus trichocarpa HOM05D005150 ORTHO05D006070 5.5e-10 67.8 109 43.1
Sed0012024 Sechium edule HOM05D005150 ORTHO05D006070 5.5e-10 67.8 109 42.2
Gohir.A07G189900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 7.2e-10 67.4 111 37.8
Gohir.D07G196100 Gossypium hirsutum HOM05D005150 ORTHO05D006070 7.2e-10 67.4 111 37.8
Gorai.001G219600 Gossypium raimondii HOM05D005150 ORTHO05D006070 7.2e-10 67.4 111 37.8
Phvul.008G205400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 7.2e-10 67.4 105 41.0
Sed0026674 Sechium edule HOM05D005150 ORTHO05D006070 1.2e-09 66.6 110 43.6
Hma1.2p1_0133F.1_g061080 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 1.6e-09 66.2 110 42.7
RcHm_v2.0_Chr2g0156971 Rosa chinensis HOM05D005150 ORTHO05D006070 1.6e-09 66.2 110 40.9
VMungo0647G0767 Vigna mungo HOM05D005150 ORTHO05D006070 1.6e-09 66.2 105 40.0
Cpa.g.sc136.7 Carica papaya HOM05D005150 ORTHO05D006070 2.1e-09 65.9 114 39.5
Ciclev10017035m.g Citrus clementina HOM05D005150 ORTHO05D006070 2.1e-09 65.9 108 38.0
Lsat_1_v5_gn_9_105581 Lactuca sativa HOM05D005150 ORTHO05D006070 2.1e-09 65.9 104 39.4
CAN.G584.30 Capsicum annuum HOM05D005150 ORTHO05D006070 3.6e-09 65.1 109 40.4
CiPaw.03G276700 Carya illinoinensis HOM05D005150 ORTHO05D006070 3.6e-09 65.1 108 39.8
FAN05G2177 Fragaria x ananassa HOM05D005150 ORTHO05D006070 3.6e-09 65.1 110 40.0
Glyma.13G073800 Glycine max HOM05D005150 ORTHO05D006070 3.6e-09 65.1 110 40.9
CSS0010457 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 8.0e-09 63.9 108 40.7
CSS0040672 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 8.0e-09 63.9 108 40.7
Lsat_1_v5_gn_7_95641 Lactuca sativa HOM05D005150 ORTHO05D006070 1.0e-08 63.5 109 38.5
FAN02G0634 Fragaria x ananassa HOM05D005150 ORTHO05D006070 1.4e-08 63.2 110 38.2
Gohir.D11G157400 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.4e-08 63.2 106 38.7
Gorai.007G167900 Gossypium raimondii HOM05D005150 ORTHO05D006070 1.4e-08 63.2 106 38.7
Aqoxy1G04044 Aquilegia oxysepala HOM05D005150 ORTHO05D006070 1.8e-08 62.8 108 41.7
Nn1g07416 Nelumbo nucifera HOM05D005150 ORTHO05D006070 1.8e-08 62.8 110 40.9
Atru.chr6.3335 Acer truncatum HOM05D005150 ORTHO05D006070 2.3e-08 62.4 61 52.5
Actinidia21452 Actinidia chinensis HOM05D005150 ORTHO05D006070 2.3e-08 62.4 112 35.7
arahy.Tifrunner.gnm1.ann1.CR4AH5 Arachis hypogaea HOM05D005150 ORTHO05D006070 3.0e-08 62.0 109 38.5
arahy.Tifrunner.gnm1.ann1.V5U7H6 Arachis hypogaea HOM05D005150 ORTHO05D006070 3.0e-08 62.0 109 38.5
Glyma.02G276100 Glycine max HOM05D005150 ORTHO05D006070 3.0e-08 62.0 109 37.6
Gohir.A11G150900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 3.0e-08 62.0 106 38.7
Rhsim06G0172200 Rhododendron simsii HOM05D005150 ORTHO05D006070 3.0e-08 62.0 111 37.8
HanXRQChr03g0075721 Helianthus annuus HOM05D005150 ORTHO05D006070 4.0e-08 61.6 104 40.4
LjContig00564g0005952 Lotus japonicus HOM05D005150 ORTHO05D006070 4.0e-08 61.6 106 37.7
Prupe.3G204400 Prunus persica HOM05D005150 ORTHO05D006070 4.0e-08 61.6 120 37.5
Sc06g0009750 Simmondsia chinensis HOM05D005150 ORTHO05D006070 4.0e-08 61.6 87 44.8
Lalb_Chr04g0249481 Lupinus albus HOM05D005150 ORTHO05D006070 5.2e-08 61.2 109 39.4
Duzib133G1369 Durio zibethinus HOM05D005150 ORTHO05D006070 6.7e-08 60.8 112 36.6
Phvul.006G020400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 6.7e-08 60.8 110 38.2
A04p09910 Brassica napus HOM05D005150 ORTHO05D006070 8.8e-08 60.5 105 41.9
BraA04t16654Z Brassica rapa HOM05D005150 ORTHO05D006070 8.8e-08 60.5 105 41.9
ECA240G3606 Erigeron canadensis HOM05D005150 ORTHO05D006070 8.8e-08 60.5 90 42.2
Aa31sc697G10 Aethionema arabicum HOM05D005150 ORTHO05D006070 1.1e-07 60.1 91 46.2
AL7G44580 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 1.1e-07 60.1 105 40.0
Lsat_1_v5_gn_5_124661 Lactuca sativa HOM05D005150 ORTHO05D006070 1.1e-07 60.1 105 39.0
Rhsim06G0172300 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.1e-07 60.1 111 38.7
C04p43410 Brassica napus HOM05D005150 ORTHO05D006070 2.0e-07 59.3 105 39.0
Nn1g03285 Nelumbo nucifera HOM05D005150 ORTHO05D006070 2.0e-07 59.3 113 38.9
BcaC02g09491 Brassica carinata HOM05D005150 ORTHO05D006070 2.6e-07 58.9 105 41.0
BolC4t25919H Brassica oleracea HOM05D005150 ORTHO05D006070 2.6e-07 58.9 105 41.0
MBI19_g06152_MAGBIO Magnolia biondii HOM05D005150 ORTHO05D006070 2.6e-07 58.9 103 39.8
FvH4_6g41440 Fragaria vesca HOM05D005150 ORTHO05D006070 3.3e-07 58.5 60 50.0
Thecc.01G187900 Theobroma cacao HOM05D005150 ORTHO05D006070 3.3e-07 58.5 113 36.3
Hma1.2p1_0405F.1_g145660 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 4.4e-07 58.2 110 38.2
Medtr7g058970 Medicago truncatula HOM05D005150 ORTHO05D006070 4.4e-07 58.2 114 36.8
Carub.0007s3148 Capsella rubella HOM05D005150 ORTHO05D006070 5.7e-07 57.8 113 45.1
vmacro12127 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 5.7e-07 57.8 111 36.0
CARHR216910 Cardamine hirsuta HOM05D005150 ORTHO05D006070 7.5e-07 57.4 105 40.0
ECA234G4664 Erigeron canadensis HOM05D005150 ORTHO05D006070 9.7e-07 57.0 113 37.2
DCAR_012901 Daucus carota HOM05D005150 ORTHO05D006070 1.3e-06 56.6 86 44.2
AUR62015079 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.7e-06 56.2 119 36.1
AUR62017541 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.7e-06 56.2 119 36.1
Lalb_Chr19g0125521 Lupinus albus HOM05D005150 ORTHO05D006070 1.7e-06 56.2 107 36.4
MD09G1119700 Malus domestica HOM05D005150 ORTHO05D006070 2.8e-06 55.5 124 33.1
COL.COLO4_25851 Corchorus olitorius HOM05D005150 ORTHO05D006070 3.7e-06 55.1 58 51.7
THA.LOC104826613 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 3.7e-06 55.1 54 57.4
EL10Ac9g22759 Beta vulgaris HOM05D005150 ORTHO05D006070 4.8e-06 54.7 119 35.3
Oeu040478.2 Olea europaea HOM05D005150 ORTHO05D006070 4.8e-06 54.7 110 39.1
Eucgr.K00667 Eucalyptus grandis HOM05D005150 ORTHO05D006070 6.3e-06 54.3 98 38.8
Gorai.001G194000 Gossypium raimondii HOM05D005150 ORTHO05D006070 8.2e-06 53.9 58 46.6
Rhsim04G0044800 Rhododendron simsii HOM05D005150 ORTHO05D006070 8.2e-06 53.9 105 36.2
TPR.G12632 Trifolium pratense HOM05D005150 ORTHO05D006070 8.2e-06 53.9 59 50.8


User provided reference genes

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