Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 8.8e-184 646.7 308 100.0
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 1.6e-137 493.0 329 78.1
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 2.3e-123 446.0 319 67.7
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 2.3e-115 419.5 320 68.1
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 5.3e-104 381.7 325 59.4
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 8.7e-99 364.4 316 57.3
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 5.3e-96 355.1 192 88.5
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 3.5e-92 342.4 298 55.7
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 7.4e-66 255.0 320 40.9
Sed0007767 Sechium edule HOM05D007588 ORTHO05D001339 8.0e-60 235.0 309 45.0
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 8.8e-59 231.5 317 40.1
Sed0016803 Sechium edule HOM05D007588 ORTHO05D001339 1.7e-57 227.3 325 41.8
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.5e-55 219.5 308 35.7
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-52 210.7 308 34.1
MELO3C014073.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.8e-51 204.9 302 35.8
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.5e-50 204.1 325 36.0
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.4e-50 202.6 314 37.6
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.8e-49 199.1 314 36.6
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 3.1e-48 196.4 155 59.4
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.0e-48 195.3 205 42.4
Sed0015279 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-47 194.5 320 40.0
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-46 190.7 212 44.3
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-46 189.9 212 44.3
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 5.0e-46 189.1 311 35.4
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.5e-46 188.3 211 41.7
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.5e-45 185.7 321 32.4
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.7e-44 182.6 211 40.8
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.7e-44 182.6 314 34.1
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.2e-43 179.1 218 39.4
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.1e-40 171.4 181 43.6
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.8e-40 170.6 215 40.0
MELO3C024617.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.4e-40 169.1 185 43.8
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.9e-39 165.6 200 39.0
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-38 164.5 235 37.0
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.9e-37 160.6 173 43.9
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.5e-37 160.2 193 39.9
CsaV3_5G024960 Cucumis sativus L. HOM05D007588 ORTHO05D001339 7.8e-31 138.7 234 32.9
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.6e-29 132.5 142 44.4
Sed0000206 Sechium edule HOM05D007588 ORTHO05D001339 9.5e-29 131.7 211 34.1
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.8e-28 130.2 142 43.0
MELO3C004802.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.4e-24 117.1 109 45.9
Sed0000745 Sechium edule HOM05D007588 ORTHO05D001339 5.4e-24 115.9 165 38.8
ClCG08G006820 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.0e-23 114.0 145 41.4
Sed0021777 Sechium edule HOM05D007588 ORTHO05D001339 2.7e-23 113.6 110 49.1
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 4.6e-23 112.8 247 29.6
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.6e-22 108.6 140 37.1
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.5e-21 107.8 118 34.7
MELO3C032919.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.3e-21 106.3 102 44.1
Sed0008385 Sechium edule HOM05D007588 ORTHO05D001339 1.6e-20 104.4 172 37.2
Sed0014331 Sechium edule HOM05D007588 ORTHO05D001339 4.7e-20 102.8 94 59.6
Sed0017408 Sechium edule HOM05D007588 ORTHO05D001339 8.0e-20 102.1 280 26.8
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 3.1e-19 100.1 142 34.5
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 5.2e-19 99.4 247 27.5
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.0e-18 97.4 140 32.1
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 3.4e-18 96.7 248 28.6
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 3.4e-18 96.7 142 33.1
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 3.4e-18 96.7 142 33.1
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-17 94.4 127 36.2
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 4.9e-17 92.8 210 30.0
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-16 90.9 140 32.9
ClCG07G010540 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.1e-16 89.7 158 33.5
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-16 89.7 140 32.1
Lj2P420T16 Lonicera japonica HOM05D009066 ORTHO05D001339 7.0e-16 89.0 126 31.7
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 9.2e-16 88.6 137 32.8
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 9.2e-16 88.6 241 26.1
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 9.2e-16 88.6 241 26.6
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.2e-15 88.2 128 35.9
ClCG05G011080 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.2e-15 88.2 163 33.1
ClCG06G009990 Citrullus lanatus HOM05D009184 ORTHO05D000002 3.5e-15 86.7 215 27.9
Lj1C860G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-15 86.3 229 26.2
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 7.8e-15 85.5 248 23.8
MELO3C027442.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.0e-14 85.1 70 45.7
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-14 85.1 192 27.6
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-14 84.3 144 30.6
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 3.0e-14 83.6 143 32.9
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-14 82.8 241 24.9
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 6.6e-14 82.4 247 29.6
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 6.6e-14 82.4 144 28.5
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 6.6e-14 82.4 191 26.7
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 8.6e-14 82.0 203 25.6
Sed0000711 Sechium edule HOM05D048706 ORTHO05D001339 8.6e-14 82.0 163 35.6
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-13 81.6 139 31.7
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-13 81.6 149 28.9
CSS0004318 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.5e-13 81.3 130 33.1
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-13 81.3 194 26.8
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-13 80.9 144 27.1
Lj2C10T1 Lonicera japonica HOM05D009066 ORTHO05D001339 1.9e-13 80.9 217 25.3
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-13 80.9 148 29.1
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-13 80.9 160 28.8
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 2.5e-13 80.5 104 37.5
ClCG05G012190 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.5e-13 80.5 91 37.4
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-13 80.5 242 24.4
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-13 80.5 144 29.2
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 2.5e-13 80.5 148 28.4
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-13 80.1 238 23.1
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-13 79.7 143 28.0
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-13 79.7 247 25.1
ClCG01G016460 Citrullus lanatus HOM05D009184 ORTHO05D001339 7.3e-13 79.0 81 39.5
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 7.3e-13 79.0 139 28.1
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-12 77.8 198 26.8
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-12 77.8 238 23.5
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-12 77.8 238 23.1
Sed0010098 Sechium edule HOM05D007588 ORTHO05D001339 2.8e-12 77.0 47 72.3
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.6e-12 76.6 145 28.3
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 4.7e-12 76.3 141 28.4
Sed0013444 Sechium edule HOM05D007588 ORTHO05D001339 8.1e-12 75.5 247 26.3
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-11 74.7 105 32.4
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-11 74.7 102 34.3
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-11 73.9 198 24.7
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-11 73.6 241 23.2
Lj5P198T48 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-11 73.6 124 28.2
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-11 73.2 199 25.1
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.0e-11 73.2 137 27.7
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 6.8e-11 72.4 164 25.0
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 6.8e-11 72.4 135 28.1
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.9e-11 72.0 148 31.8
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 8.9e-11 72.0 133 28.6
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-10 71.2 141 27.7
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-10 70.9 190 27.4
Lj6P216T13 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-10 70.5 128 28.9
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 3.4e-10 70.1 224 24.6
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 4.4e-10 69.7 166 26.5
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 5.8e-10 69.3 155 30.3
Lj8P504T20 Lonicera japonica HOM05D009066 ORTHO05D001339 7.5e-10 68.9 150 27.3
Lj2C7T5 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-09 67.4 144 25.7
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-09 67.0 107 30.8
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.9e-09 67.0 80 40.0
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.7e-09 66.6 59 45.8
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-08 65.1 108 28.7
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-08 64.3 75 38.7
ClCG08G003110 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.4e-08 63.9 56 44.6
CSS0038789 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 4.1e-08 63.2 205 21.0
ClCG04G001010 Citrullus lanatus HOM05D009184 ORTHO05D015610 4.1e-08 63.2 80 31.2
PGSC0003DMG400023777 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.1e-08 63.2 105 30.5
ClCG03G017440 Citrullus lanatus HOM05D007588 ORTHO05D001339 5.4e-08 62.8 85 36.5
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-08 62.8 78 35.9
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 5.4e-08 62.8 122 27.9
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 7.1e-08 62.4 248 23.8
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 7.1e-08 62.4 82 36.6
TPR.G18402 Trifolium pratense HOM05D002777 ORTHO05D001516 7.1e-08 62.4 192 26.0
PSO210G7745 Papaver somniferum HOM05D002180 ORTHO05D001339 9.2e-08 62.0 177 27.1
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-07 60.8 142 27.5
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 2.7e-07 60.5 143 24.5
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-07 60.5 108 26.9
MELO3C028681.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.5e-07 60.1 105 29.5
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-07 59.7 122 26.2
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-07 59.7 109 29.4
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 6.0e-07 59.3 53 43.4
Lj7C730T4 Lonicera japonica HOM05D002180 ORTHO05D001339 7.8e-07 58.9 140 24.3
Nn4g26617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 7.8e-07 58.9 85 34.1
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 7.8e-07 58.9 72 37.5
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.8e-07 58.9 87 35.6
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.8e-07 58.9 87 35.6
MELO3C032938.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.0e-06 58.5 105 31.4
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 1.0e-06 58.5 77 31.2
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.0e-06 58.5 77 31.2
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.0e-06 58.5 77 31.2
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.0e-06 58.5 77 31.2
MELO3C029351.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.3e-06 58.2 96 33.3
MELO3C033939.2 Cucumis melo HOM05D018160 ORTHO05D034961 1.3e-06 58.2 100 29.0
PSO017G7198 Papaver somniferum HOM05D002180 ORTHO05D001339 1.3e-06 58.2 106 33.0
CSS0040716 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.3e-06 57.4 105 26.7
Lj6C285T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.0e-06 57.0 140 26.4
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.0e-06 57.0 74 36.5
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 3.0e-06 57.0 106 31.1
CsaV3_1G009110 Cucumis sativus L. HOM05D007588 ORTHO05D001339 3.9e-06 56.6 79 35.4
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.9e-06 56.6 79 34.2
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.9e-06 56.6 73 35.6
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 5.1e-06 56.2 107 29.0
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.1e-06 56.2 72 31.9
CsaV3_6G041450 Cucumis sativus L. HOM05D007588 ORTHO05D001339 6.6e-06 55.8 129 26.4
Nn2g11110 Nelumbo nucifera HOM05D011113 ORTHO05D001339 6.6e-06 55.8 94 31.9
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 6.6e-06 55.8 79 35.4
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 6.6e-06 55.8 106 30.2


User provided reference genes

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