Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.8e-165 585.9 306 100.0
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 9.4e-154 547.0 306 94.1
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 1.6e-153 546.2 306 94.4
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 8.0e-137 490.7 306 83.7
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 6.6e-131 471.1 306 79.1
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.6e-131 470.7 306 80.1
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 1.9e-130 469.5 334 75.7
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 1.9e-130 469.5 334 75.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 4.2e-130 468.4 306 79.4
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 4.2e-130 468.4 306 79.4
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 7.2e-130 467.6 306 78.1
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.4e-128 463.4 306 77.8
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 2.3e-128 462.6 306 78.4
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.0e-128 461.8 306 77.5
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.2e-128 461.5 306 79.7
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 8.9e-128 460.7 306 79.1
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 8.9e-128 460.7 306 78.8
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 1.2e-127 460.3 312 78.2
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 1.5e-127 459.9 312 77.6
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 1.5e-127 459.9 306 78.8
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.5e-127 459.9 306 78.8
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 7.5e-127 457.6 306 78.1
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 6.3e-126 454.5 307 78.2
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.4e-125 453.4 306 76.1
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 3.1e-125 452.2 306 78.8
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 5.4e-125 451.4 306 75.8
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 1.2e-124 450.3 312 75.6
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 3.5e-124 448.7 308 77.3
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 5.9e-124 448.0 306 76.1
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.0e-123 447.2 306 73.9
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.3e-123 446.8 274 82.8
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.7e-123 446.4 306 75.5
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 5.0e-123 444.9 309 74.1
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 8.6e-123 444.1 306 75.5
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.5e-122 443.4 314 74.2
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 1.9e-122 443.0 307 75.6
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 2.5e-122 442.6 306 76.5
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 3.3e-122 442.2 314 74.2
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 4.3e-122 441.8 306 74.2
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 5.6e-122 441.4 306 75.2
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 6.1e-121 438.0 306 72.2
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 6.1e-121 438.0 306 73.2
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 8.0e-121 437.6 306 75.2
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 8.0e-121 437.6 307 74.6
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 1.0e-120 437.2 306 72.9
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 2.3e-120 436.0 306 72.2
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 4.0e-120 435.3 309 75.7
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 4.0e-120 435.3 309 75.7
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 5.2e-120 434.9 306 75.8
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 6.8e-120 434.5 310 75.5
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 8.9e-120 434.1 306 71.2
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 8.9e-120 434.1 306 71.2
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.2e-119 433.7 306 72.5
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 1.2e-119 433.7 306 75.2
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.2e-119 433.7 306 72.9
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 1.5e-119 433.3 306 72.2
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.5e-119 433.3 306 72.5
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 3.4e-119 432.2 278 77.7
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.4e-119 432.2 306 72.2
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 4.4e-119 431.8 306 72.5
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 4.4e-119 431.8 306 71.9
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 5.8e-119 431.4 306 73.5
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 7.5e-119 431.0 306 71.2
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 7.5e-119 431.0 306 71.6
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 1.3e-118 430.3 314 75.2
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 2.2e-118 429.5 278 77.3
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.2e-118 429.5 293 75.1
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 2.2e-118 429.5 308 75.3
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 3.7e-118 428.7 312 75.0
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 1.9e-117 426.4 307 71.0
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.4e-117 426.0 269 78.4
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 2.4e-117 426.0 305 72.1
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 7.0e-117 424.5 306 71.6
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 1.6e-116 423.3 352 64.5
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 3.5e-116 422.2 310 72.6
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 6.0e-116 421.4 313 73.2
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 1.3e-115 420.2 311 71.7
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 2.3e-115 419.5 335 66.6
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 2.3e-115 419.5 311 74.0
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 8.6e-115 417.5 310 71.0
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 1.6e-113 413.3 305 71.5
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 2.8e-113 412.5 304 70.1
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 2.8e-113 412.5 271 74.9
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 4.7e-113 411.8 325 69.8
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 1.1e-112 410.6 297 74.4
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 4.4e-111 405.2 315 69.5
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 7.8e-108 394.4 306 66.7
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 3.0e-107 392.5 306 68.0
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 3.0e-107 392.5 307 67.4
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 8.9e-104 380.9 306 68.0
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 3.4e-103 379.0 324 65.7
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 1.1e-101 374.0 320 64.1
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.2e-100 370.5 324 62.0
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 9.5e-98 360.9 346 58.4
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 5.2e-96 355.1 320 60.6
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 2.1e-92 343.2 272 66.2
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.6e-89 332.4 231 74.0
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 2.6e-87 326.2 300 59.3
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.2e-86 323.2 237 72.2
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 2.9e-86 322.8 313 57.5
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 2.3e-83 313.2 235 73.2
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 9.0e-80 301.2 201 78.1
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.4e-77 293.1 260 61.9
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.4e-72 277.3 209 70.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 5.8e-71 271.9 306 50.3
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 4.5e-63 245.7 262 49.2
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.8e-59 233.8 192 67.7
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 1.9e-58 230.3 279 43.7
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 1.7e-49 200.7 316 41.5
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 2.0e-47 193.7 305 38.0
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.3e-46 191.0 155 66.5
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.4e-40 170.2 315 35.9
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 7.7e-39 165.2 300 42.7
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 5.0e-38 162.5 242 39.3
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.1e-36 157.1 116 71.6
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.1e-28 130.6 88 77.3
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 6.1e-28 129.0 229 38.0
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 1.1e-21 108.2 74 73.0
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 5.2e-19 99.4 135 47.4
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 4.4e-18 96.3 93 55.9
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 7.0e-16 89.0 81 59.3
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 2.9e-09 67.0 79 53.2
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.3e-06 58.2 57 45.6


User provided reference genes

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