Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 5.7e-39 163.7 78 100.0
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 5.0e-35 150.6 78 89.7
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.5e-34 148.3 78 85.9
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.0e-32 142.9 78 80.8
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.0e-32 141.0 73 86.3
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.2e-32 140.6 78 79.5
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 6.8e-32 140.2 78 79.5
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 6.8e-32 140.2 78 78.2
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 8.8e-32 139.8 78 78.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 8.8e-32 139.8 76 78.9
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.2e-31 139.4 78 78.2
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.0e-31 138.7 72 86.1
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 2.6e-31 138.3 78 79.5
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.4e-31 137.9 78 78.2
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 3.4e-31 137.9 76 80.3
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 5.7e-31 137.1 76 78.9
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 7.5e-31 136.7 73 82.2
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 7.5e-31 136.7 78 78.2
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 1.3e-30 136.0 75 81.3
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 1.3e-30 136.0 78 73.1
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 1.3e-30 136.0 76 76.3
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.3e-30 136.0 76 76.3
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.3e-30 136.0 76 80.3
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.7e-30 135.6 73 79.5
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.7e-30 135.6 76 76.3
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.7e-30 135.6 73 79.5
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 2.2e-30 135.2 73 80.8
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.8e-30 134.8 76 78.9
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 3.7e-30 134.4 73 82.2
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 6.3e-30 133.7 77 76.6
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 8.3e-30 133.3 78 73.1
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 8.3e-30 133.3 78 73.1
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.1e-29 132.9 73 78.1
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.4e-29 132.5 76 73.7
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.1e-29 131.3 72 76.4
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 3.1e-29 131.3 72 77.8
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.1e-29 131.0 73 76.7
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 4.1e-29 131.0 72 77.8
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 4.1e-29 131.0 78 74.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 5.4e-29 130.6 78 70.5
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 7.0e-29 130.2 72 79.2
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 9.1e-29 129.8 73 76.7
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 9.1e-29 129.8 76 73.7
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.0e-28 128.6 69 81.2
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.0e-28 128.6 73 76.7
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 3.5e-28 127.9 73 75.3
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 3.5e-28 127.9 73 75.3
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 3.5e-28 127.9 73 75.3
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 4.5e-28 127.5 73 75.3
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 5.9e-28 127.1 73 74.0
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 5.9e-28 127.1 73 75.3
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 7.7e-28 126.7 72 73.6
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.0e-27 126.3 74 74.3
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.3e-27 125.9 78 69.2
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.2e-27 125.2 74 73.0
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 2.9e-27 124.8 74 75.7
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 3.8e-27 124.4 72 73.6
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 5.0e-27 124.0 69 75.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 5.0e-27 124.0 69 78.3
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 6.5e-27 123.6 78 69.2
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 75.0
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 1.5e-26 122.5 70 77.1
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.9e-26 122.1 69 76.8
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.9e-26 122.1 77 67.5
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.9e-26 122.1 72 75.0
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.5e-26 121.7 72 73.6
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 2.5e-26 121.7 72 73.6
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 2.5e-26 121.7 72 73.6
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.5e-26 121.7 72 73.6
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-26 120.9 71 71.8
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 72.2
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 75.0
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-26 120.9 72 75.0
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 5.5e-26 120.6 72 72.2
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.6e-25 119.0 72 72.2
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.1e-25 118.6 71 73.2
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.1e-25 118.6 71 73.2
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 4.7e-25 117.5 78 71.8
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 4.7e-25 117.5 71 69.0
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 6.1e-25 117.1 72 70.8
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 6.1e-25 117.1 86 65.1
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 6.1e-25 117.1 66 78.8
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 6.1e-25 117.1 72 65.3
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 8.0e-25 116.7 71 67.6
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 8.0e-25 116.7 72 66.7
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.0e-24 116.3 69 72.5
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.0e-24 116.3 69 72.5
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.4e-24 115.9 71 69.0
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.4e-24 115.9 86 64.0
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.4e-24 115.9 72 69.4
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.8e-24 115.5 71 67.6
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.0e-24 114.8 72 65.3
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.0e-24 114.8 72 69.4
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 4.0e-24 114.4 70 71.4
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 5.2e-24 114.0 91 60.4
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.8e-24 113.2 72 70.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-23 112.8 62 77.4
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-23 112.5 72 62.5
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-23 112.5 72 62.5
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.0e-23 112.1 72 61.1
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.4e-23 111.3 72 62.5
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 1.7e-22 109.0 61 77.0
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.8e-22 108.2 72 63.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.8e-22 108.2 72 63.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.8e-22 108.2 72 63.9
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 3.7e-22 107.8 65 72.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.9e-22 107.5 72 63.9
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 1.8e-21 105.5 60 73.3
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.2e-20 102.8 69 60.9
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.6e-20 102.4 69 59.4
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.5e-20 101.3 70 54.3
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.3e-19 98.6 58 79.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.0e-19 97.4 65 64.6
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.9e-18 95.5 83 54.2
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 2.8e-17 91.7 73 61.6
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.7e-17 90.9 48 81.2
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 9.5e-10 66.6 70 48.6
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.0e-08 63.2 74 40.5
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.0e-08 63.2 70 42.9
TAR371G0323 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.1e-08 61.6 31 80.6
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.5e-07 59.3 30 83.3


User provided reference genes

Program Settings