Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 5.2e-84 314.7 203 100.0
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 5.3e-36 155.2 197 70.1
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 5.5e-33 145.2 205 66.8
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 1.3e-26 124.0 92 62.0
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 1.1e-22 110.9 54 79.6
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.5e-22 109.8 76 67.1
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 5.7e-22 108.6 74 67.6
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 7.4e-22 108.2 64 71.9
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 7.4e-22 108.2 76 67.1
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 7.4e-22 108.2 91 56.0
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 7.4e-22 108.2 92 53.3
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 9.7e-22 107.8 89 55.1
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.6e-21 107.1 91 57.1
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 4.8e-21 105.5 55 74.5
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 6.3e-21 105.1 92 51.1
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 2.4e-20 103.2 90 56.7
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 3.1e-20 102.8 92 50.0
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 3.1e-20 102.8 92 54.3
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 6.9e-20 101.7 91 51.6
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 1.5e-19 100.5 56 75.0
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 1.5e-19 100.5 47 80.9
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 2.6e-19 99.8 70 61.4
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 2.6e-19 99.8 61 67.2
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 2.6e-19 99.8 59 69.5
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 2.6e-19 99.8 90 48.9
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 3.4e-19 99.4 45 82.2
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 3.4e-19 99.4 90 51.1
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 7.7e-19 98.2 68 61.8
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 1.0e-18 97.8 90 54.4
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 1.3e-18 97.4 91 52.7
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 1.7e-18 97.1 88 53.4
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 1.4e-17 94.0 41 87.8
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 7.2e-17 91.7 56 64.3
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 7.2e-17 91.7 59 62.7
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 1.2e-16 90.9 56 60.7
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 1.2e-16 90.9 47 72.3
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 1.6e-16 90.5 92 45.7
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 2.7e-16 89.7 64 57.8
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 6.1e-16 88.6 91 48.4
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 6.1e-16 88.6 92 48.9
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 2.0e-14 83.6 44 70.5
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 7.4e-14 81.6 46 63.0
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 1.4e-12 77.4 42 66.7
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.8e-12 77.0 39 71.8
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 6.9e-12 75.1 44 61.4
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.2e-11 74.3 43 69.8
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 2.0e-11 73.6 90 36.7
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 2.6e-11 73.2 90 36.7
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 2.6e-11 73.2 90 36.7
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 2.6e-11 73.2 90 36.7
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 2.6e-11 73.2 55 52.7
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 7.7e-11 71.6 48 54.2
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 1.7e-10 70.5 54 48.1
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 1.7e-10 70.5 90 35.6
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 1.7e-10 70.5 48 52.1
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 1.7e-10 70.5 48 52.1
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 1.7e-10 70.5 48 52.1
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 2.2e-10 70.1 54 48.1
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 2.2e-10 70.1 54 48.1
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 6.5e-10 68.6 39 64.1
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 1.1e-09 67.8 48 50.0
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.4e-09 67.4 48 50.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 1.9e-09 67.0 90 36.7
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 1.9e-09 67.0 90 36.7
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 1.9e-09 67.0 90 36.7
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 2.5e-09 66.6 44 54.5
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 9.4e-09 64.7 48 45.8
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 2.1e-08 63.5 37 67.6
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 2.0e-06 57.0 65 44.6
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 3.3e-06 56.2 40 55.0
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 4.4e-06 55.8 89 37.1


User provided reference genes

Program Settings