Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002943 Sechium edule HOM05D001618 ORTHO05D001486 3.2e-50 201.4 102 100.0
Sed0022517 Sechium edule HOM05D001618 ORTHO05D001486 2.5e-42 175.3 102 89.2
ClCG11G016410 Citrullus lanatus HOM05D001618 ORTHO05D001486 5.0e-35 151.0 156 59.6
CsaV3_4G031860 Cucumis sativus L. HOM05D001618 ORTHO05D001486 1.3e-30 136.3 156 56.4
MELO3C010571.2 Cucumis melo HOM05D001618 ORTHO05D001486 2.4e-29 132.1 158 54.4
Phvul.011G174700 Phaseolus vulgaris HOM05D001618 ORTHO05D001486 4.5e-20 101.3 129 51.9
Glyma.08G236300 Glycine max HOM05D001618 ORTHO05D001486 7.8e-20 100.5 132 49.2
Lalb_Chr01g0007171 Lupinus albus HOM05D001618 ORTHO05D001486 7.8e-20 100.5 129 48.8
Lj3g0002752 Lotus japonicus HOM05D001618 ORTHO05D001486 1.0e-19 100.1 129 49.6
Potri.011G143400 Populus trichocarpa HOM05D001618 ORTHO05D001486 1.0e-19 100.1 128 49.2
Sabra11G0128100 Salix brachista HOM05D001618 ORTHO05D001486 1.0e-19 100.1 128 49.2
CiPaw.03G179500 Carya illinoinensis HOM05D001618 ORTHO05D001486 2.3e-19 99.0 133 48.9
Potri.001G458000 Populus trichocarpa HOM05D001618 ORTHO05D001486 5.0e-19 97.8 132 48.5
Sabra16G0310500 Salix brachista HOM05D001618 ORTHO05D001486 6.6e-19 97.4 128 49.2
Manes.14G016100 Manihot esculenta HOM05D001618 ORTHO05D001486 1.5e-18 96.3 132 47.0
Prupe.4G140200 Prunus persica HOM05D001618 ORTHO05D001486 1.5e-18 96.3 136 47.1
Sopen07g034610 Solanum pennellii HOM05D001618 ORTHO05D001486 1.5e-18 96.3 127 50.4
VMungo1127G1601 Vigna mungo HOM05D001618 ORTHO05D001486 1.9e-18 95.9 129 50.4
Duzib213G0738 Durio zibethinus HOM05D001618 ORTHO05D001486 2.5e-18 95.5 134 47.0
CAN.G943.36 Capsicum annuum HOM05D001618 ORTHO05D001486 4.3e-18 94.7 128 47.7
Ciclev10023709m.g Citrus clementina HOM05D001618 ORTHO05D001486 5.6e-18 94.4 130 46.9
Gohir.1Z049325 Gossypium hirsutum HOM05D001618 ORTHO05D001486 7.3e-18 94.0 127 48.8
Gohir.A01G038900 Gossypium hirsutum HOM05D001618 ORTHO05D001486 7.3e-18 94.0 146 45.9
Duzib268G0166 Durio zibethinus HOM05D001618 ORTHO05D001486 1.2e-17 93.2 128 49.2
Oeu003829.1 Olea europaea HOM05D001618 ORTHO05D001486 1.2e-17 93.2 127 48.0
QL04p073875 Quercus lobata HOM05D001618 ORTHO05D001486 1.2e-17 93.2 136 46.3
TAR626G1833 Trochodendron aralioides HOM05D001618 ORTHO05D001486 1.6e-17 92.8 125 46.4
Nn7g37979 Nelumbo nucifera HOM05D001618 ORTHO05D001486 2.1e-17 92.4 124 47.6
Gorai.002G036000 Gossypium raimondii HOM05D001618 ORTHO05D001486 6.1e-17 90.9 146 45.2
Peaxi162Scf00452g00826 Petunia axillaris HOM05D001618 ORTHO05D001486 6.1e-17 90.9 126 46.8
Aqoxy7G01508 Aquilegia oxysepala HOM05D001618 ORTHO05D001486 1.0e-16 90.1 126 46.8
TPR.G9409 Trifolium pratense HOM05D001618 ORTHO05D001486 1.0e-16 90.1 128 48.4
CSS0001227 Camellia sinensis var. sinensis HOM05D001618 ORTHO05D001486 1.4e-16 89.7 136 46.3
DCAR_013740 Daucus carota HOM05D001618 ORTHO05D001486 5.2e-16 87.8 129 44.2
Cfa019928 Carpinus fangiana HOM05D001618 ORTHO05D001486 6.8e-16 87.4 133 45.1
Cfa019433 Carpinus fangiana HOM05D001618 ORTHO05D001486 8.9e-16 87.0 131 45.0
Thecc.07G153100 Theobroma cacao HOM05D001618 ORTHO05D001486 8.9e-16 87.0 126 46.0
Glyma.07G074900 Glycine max HOM05D001618 ORTHO05D001486 1.2e-15 86.7 128 43.8
Haze_08552 Corylus avellana HOM05D001618 ORTHO05D001486 1.5e-15 86.3 128 45.3
SalBow8G1925 Salvia bowleyana HOM05D001618 ORTHO05D001486 2.0e-15 85.9 113 50.4
Hma1.2p1_0637F.1_g193550 Hydrangea macrophylla HOM05D001618 ORTHO05D001486 2.6e-15 85.5 127 45.7
MSTRG.16111 Avicennia marina HOM05D001618 ORTHO05D001486 5.8e-15 84.3 141 41.8
VMungo0331G1754 Vigna mungo HOM05D001618 ORTHO05D001486 5.8e-15 84.3 128 42.2
Atru.chr12.2174 Acer truncatum HOM05D001618 ORTHO05D001486 7.5e-15 84.0 107 49.5
FAN25G3714 Fragaria x ananassa HOM05D001618 ORTHO05D001486 1.7e-14 82.8 139 41.7
RcHm_v2.0_Chr5g0026611 Rosa chinensis HOM05D001618 ORTHO05D001486 2.2e-14 82.4 142 43.0
Phvul.010G094500 Phaseolus vulgaris HOM05D001618 ORTHO05D001486 2.9e-14 82.0 128 44.5
TWI38G2010 Tripterygium wilfordii HOM05D001618 ORTHO05D001486 4.9e-14 81.3 137 40.1
Gohir.D01G026600 Gossypium hirsutum HOM05D001618 ORTHO05D001486 6.4e-14 80.9 139 42.4
FvH4_3g15820 Fragaria vesca HOM05D001618 ORTHO05D001486 8.3e-14 80.5 144 41.0
FAN11G0765 Fragaria x ananassa HOM05D001618 ORTHO05D001486 8.3e-14 80.5 144 41.0
Glyma.03G014800 Glycine max HOM05D001618 ORTHO05D001486 1.4e-13 79.7 129 44.2
FAN16G3043 Fragaria x ananassa HOM05D001618 ORTHO05D001486 2.4e-13 79.0 140 41.4
MD10G1202100 Malus domestica HOM05D001618 ORTHO05D001486 4.1e-13 78.2 135 43.0
MSTRG.14539 Avicennia marina HOM05D001618 ORTHO05D001486 5.4e-13 77.8 134 41.8
MD05G1219800 Malus domestica HOM05D001618 ORTHO05D001486 5.4e-13 77.8 132 43.2
arahy.Tifrunner.gnm1.ann1.YT59NJ Arachis hypogaea HOM05D001618 ORTHO05D001486 7.0e-13 77.4 125 42.4
AUR62040862 Chenopodium quinoa HOM05D001618 ORTHO05D001486 7.0e-13 77.4 127 40.9
Eucgr.F01454 Eucalyptus grandis HOM05D001618 ORTHO05D001486 7.0e-13 77.4 135 45.9
CANSAT80G2159 Cannabis sativa HOM05D001618 ORTHO05D001486 1.2e-12 76.6 142 39.4
Migut.M01559 Erythranthe guttata HOM05D001618 ORTHO05D001486 1.2e-12 76.6 136 44.9
ATR0763G232 Amborella trichopoda HOM05D001618 ORTHO05D001486 1.0e-11 73.6 122 43.4
HanXRQChr03g0078101 Helianthus annuus HOM05D001618 ORTHO05D001486 1.7e-11 72.8 136 39.7
Sc06g0001550 Simmondsia chinensis HOM05D001618 ORTHO05D001486 3.0e-11 72.0 131 38.9
AUR62037622 Chenopodium quinoa HOM05D001618 ORTHO05D001486 1.1e-10 70.1 127 36.2
Lsat_1_v5_gn_7_70901 Lactuca sativa HOM05D001618 ORTHO05D001486 1.5e-10 69.7 146 39.0
PGR083G0576 Punica granatum HOM05D001618 ORTHO05D001486 1.5e-10 69.7 159 36.5
Ah.16g106590 Amaranthus hybridus HOM05D001618 ORTHO05D001486 1.2e-09 66.6 124 41.1
Dinv19620 Davidia involucrata HOM05D001618 ORTHO05D001486 1.6e-09 66.2 102 41.2
SGA_v2.0_scaffold186G40221 Striga asiatica HOM05D001618 ORTHO05D001486 2.3e-08 62.4 136 36.8
MBI02_g40901_MAGBIO Magnolia biondii HOM05D001618 ORTHO05D001486 4.4e-07 58.2 44 59.1
THA.LOC104810258 Tarenaya hassleriana HOM05D001618 ORTHO05D001486 4.4e-07 58.2 128 35.2
Aa31LG8G180 Aethionema arabicum HOM05D001618 ORTHO05D001486 5.8e-07 57.8 133 36.8
CARHR087480 Cardamine hirsuta HOM05D001618 ORTHO05D001486 3.7e-06 55.1 141 32.6
ECA236G5106 Erigeron canadensis HOM05D001618 ORTHO05D001486 3.7e-06 55.1 152 32.2


User provided reference genes

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