Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 3.8e-97 358.2 190 100.0
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 2.5e-80 302.4 199 83.9
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 2.8e-79 298.9 199 82.9
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 4.3e-72 275.0 248 65.7
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 9.9e-53 210.7 198 62.1
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 9.9e-53 210.7 208 62.0
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 1.7e-52 209.9 199 62.8
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.2e-52 209.5 200 64.0
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 8.4e-52 207.6 200 62.5
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 2.4e-51 206.1 200 63.0
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 3.2e-51 205.7 186 64.5
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 4.2e-51 205.3 198 60.6
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 7.1e-51 204.5 190 62.1
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 2.1e-50 203.0 185 63.8
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 6.0e-50 201.4 183 62.3
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 7.9e-50 201.1 183 62.3
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 3.9e-49 198.7 191 61.3
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 9.6e-48 194.1 187 59.4
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.3e-47 193.7 187 62.0
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 2.1e-47 193.0 199 59.8
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.1e-47 193.0 196 59.2
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 6.2e-47 191.4 194 58.2
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.1e-46 189.1 179 59.2
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 3.1e-46 189.1 197 57.9
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.0e-46 188.7 194 58.8
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.0e-46 188.7 194 58.2
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 5.3e-46 188.3 190 59.5
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.2e-45 187.2 181 61.9
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 2.0e-45 186.4 196 58.7
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 2.0e-45 186.4 180 62.2
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 2.6e-45 186.0 182 59.9
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.5e-45 185.3 189 58.7
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.5e-45 185.3 189 58.7
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.5e-45 185.3 191 57.6
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 4.5e-45 185.3 183 56.3
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.7e-44 183.3 193 57.5
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 3.8e-44 182.2 182 58.8
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 6.4e-44 181.4 198 56.6
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 8.4e-44 181.0 179 58.7
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.4e-43 180.3 190 54.2
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 1.4e-43 180.3 192 55.7
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 1.9e-43 179.9 189 57.1
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.4e-43 179.5 188 57.4
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.2e-43 179.1 198 56.1
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 4.2e-43 178.7 214 54.2
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 5.5e-43 178.3 194 53.1
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 5.5e-43 178.3 180 58.3
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 7.1e-43 177.9 199 55.8
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 9.3e-43 177.6 180 57.8
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.2e-42 177.2 189 56.6
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 1.6e-42 176.8 181 55.8
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 4.6e-42 175.3 185 54.6
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 6.0e-42 174.9 203 53.2
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.3e-41 173.7 182 54.4
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 1.8e-41 173.3 193 53.9
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 1.8e-41 173.3 185 53.5
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 1.8e-41 173.3 185 53.5
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.8e-41 173.3 196 55.6
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 2.3e-41 172.9 207 51.7
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 5.1e-41 171.8 196 55.6
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 8.7e-41 171.0 193 53.9
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 1.5e-40 170.2 181 55.2
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 1.5e-40 170.2 185 56.2
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 1.9e-40 169.9 181 54.7
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 1.9e-40 169.9 213 50.7
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 4.3e-40 168.7 178 55.6
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 4.3e-40 168.7 178 55.6
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 4.3e-40 168.7 178 55.6
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 5.6e-40 168.3 185 51.9
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 9.6e-40 167.5 179 56.4
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 1.3e-39 167.2 180 53.9
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 2.1e-39 166.4 195 53.8
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 2.1e-39 166.4 216 50.5
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 2.8e-39 166.0 190 53.2
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 3.7e-39 165.6 210 50.0
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 3.7e-39 165.6 221 48.9
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 8.1e-39 164.5 187 53.5
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 8.1e-39 164.5 199 52.3
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 1.1e-38 164.1 194 54.1
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 1.4e-38 163.7 206 49.0
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 1.4e-38 163.7 188 52.1
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.8e-38 163.3 179 54.7
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 3.1e-38 162.5 202 50.0
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 4.0e-38 162.2 213 50.2
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 5.3e-38 161.8 179 54.2
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 9.0e-38 161.0 202 49.5
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.5e-37 160.2 176 52.8
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 2.0e-37 159.8 190 51.1
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 2.6e-37 159.5 183 51.4
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 3.4e-37 159.1 220 48.2
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 5.8e-37 158.3 188 50.0
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 7.6e-37 157.9 206 48.5
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 4.9e-36 155.2 187 51.3
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 8.4e-36 154.5 192 50.5
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.1e-35 154.1 193 50.3
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 2.5e-35 152.9 178 51.7
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 4.2e-35 152.1 179 51.4
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 7.9e-34 147.9 195 49.2
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 1.0e-33 147.5 210 46.2
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 3.9e-33 145.6 178 50.6
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 3.9e-33 145.6 178 50.6
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 6.7e-33 144.8 179 49.2
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.1e-32 144.1 182 49.5
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 7.4e-32 141.4 178 51.7
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 9.6e-32 141.0 148 58.8
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 4.8e-31 138.7 174 48.9
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 6.9e-30 134.8 229 41.9
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 6.9e-30 134.8 229 41.9
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.2e-29 134.0 175 48.0
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 6.5e-28 128.3 182 45.1
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.4e-28 127.9 157 53.5
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 1.9e-27 126.7 150 49.3
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.2e-27 125.9 208 44.2
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 2.3e-25 119.8 184 44.6
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.9e-25 119.0 125 58.4
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.9e-24 116.7 111 55.9
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.3e-24 115.9 192 40.6
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.4e-24 114.8 186 45.7
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 6.3e-23 111.7 160 49.4
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 2.0e-21 106.7 129 50.4
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 8.5e-20 101.3 137 48.9
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.9e-19 100.1 112 55.4
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 2.5e-19 99.8 160 43.1
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 3.2e-19 99.4 177 38.4
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 2.3e-17 93.2 177 37.9
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 2.5e-16 89.7 191 36.1
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 1.4e-14 84.0 184 32.1
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 4.1e-14 82.4 168 34.5
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 1.3e-12 77.4 171 38.6
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.9e-11 73.6 67 58.2
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 1.0e-09 67.8 104 42.3
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.3e-08 62.8 116 38.8


User provided reference genes

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