Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 5.3e-109 397.9 231 100.0
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 5.6e-74 281.6 243 66.3
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.2e-73 280.4 243 66.7
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.2e-73 280.4 243 66.7
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 6.1e-73 278.1 239 66.9
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 2.4e-69 266.2 231 66.7
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 7.1e-45 184.9 237 53.6
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 3.3e-42 176.0 239 48.5
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 4.3e-42 175.6 251 46.6
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 6.9e-40 168.3 246 44.7
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.2e-39 167.5 269 46.1
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 1.5e-39 167.2 251 50.2
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 4.4e-39 165.6 250 44.0
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 9.9e-39 164.5 249 45.8
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 1.3e-38 164.1 240 47.5
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.7e-38 163.7 240 54.2
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 2.9e-38 162.9 239 52.3
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 1.1e-37 161.0 242 49.2
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 1.9e-37 160.2 247 44.9
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 2.4e-37 159.8 249 42.6
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 3.2e-37 159.5 236 44.9
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 7.1e-37 158.3 244 45.1
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 9.3e-37 157.9 219 50.7
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 1.2e-36 157.5 216 45.4
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 2.7e-36 156.4 232 44.4
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 3.5e-36 156.0 243 45.7
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.3e-35 154.1 257 48.2
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 1.7e-35 153.7 255 41.2
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.3e-35 153.3 231 43.3
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 2.3e-35 153.3 175 50.3
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 3.0e-35 152.9 236 47.5
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 3.0e-35 152.9 251 49.4
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.9e-35 152.5 233 54.1
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 3.9e-35 152.5 231 53.7
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 6.6e-35 151.8 238 49.2
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 8.7e-35 151.4 242 44.6
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.5e-34 150.6 258 46.1
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.5e-34 150.6 231 42.9
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.9e-34 150.2 244 50.0
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 1.9e-34 150.2 243 45.3
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 1.9e-34 150.2 236 44.9
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 2.5e-34 149.8 240 46.7
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 2.5e-34 149.8 235 45.1
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 3.3e-34 149.4 167 64.7
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.6e-34 148.7 228 49.6
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 5.6e-34 148.7 232 44.4
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 5.6e-34 148.7 236 52.1
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 9.6e-34 147.9 238 42.9
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 2.8e-33 146.4 262 48.5
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 4.8e-33 145.6 249 41.4
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.1e-32 144.4 243 39.1
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 1.4e-32 144.1 87 74.7
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 3.1e-32 142.9 262 47.7
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 3.1e-32 142.9 260 46.5
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.3e-32 142.1 232 49.1
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 6.9e-32 141.7 201 49.8
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 6.9e-32 141.7 249 50.2
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 6.9e-32 141.7 238 40.8
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 1.2e-31 141.0 96 69.8
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.2e-31 141.0 232 44.8
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 2.0e-31 140.2 84 78.6
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 2.6e-31 139.8 230 43.0
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.6e-31 139.8 238 41.6
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 2.6e-31 139.8 229 50.2
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 5.8e-31 138.7 82 76.8
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 5.8e-31 138.7 234 44.0
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 7.6e-31 138.3 210 42.9
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 7.6e-31 138.3 223 45.3
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 7.6e-31 138.3 238 50.8
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 9.9e-31 137.9 219 42.5
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 9.9e-31 137.9 234 43.6
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 1.7e-30 137.1 99 67.7
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.9e-30 136.3 250 44.0
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 2.9e-30 136.3 231 44.2
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 2.9e-30 136.3 236 45.3
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 3.8e-30 136.0 220 43.2
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 4.9e-30 135.6 248 51.2
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 8.4e-30 134.8 217 52.1
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 1.4e-29 134.0 99 65.7
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 1.9e-29 133.7 218 43.6
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 1.9e-29 133.7 218 43.6
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 3.2e-29 132.9 85 72.9
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 4.2e-29 132.5 86 69.8
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 4.2e-29 132.5 73 82.2
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 4.2e-29 132.5 73 82.2
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 4.2e-29 132.5 239 41.4
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 4.2e-29 132.5 95 65.3
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 7.1e-29 131.7 222 40.1
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 1.2e-28 131.0 247 45.3
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.2e-28 131.0 234 38.0
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 1.2e-28 131.0 79 75.9
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.7e-28 129.8 83 72.3
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 4.6e-28 129.0 220 37.7
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 6.0e-28 128.6 231 39.4
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 6.0e-28 128.6 233 39.1
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 6.0e-28 128.6 225 37.3
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 7.9e-28 128.3 221 39.4
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.0e-27 127.9 83 71.1
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.0e-27 127.9 235 38.3
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 1.8e-27 127.1 228 47.8
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.8e-27 127.1 232 39.7
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 5.1e-27 125.6 228 38.6
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 5.1e-27 125.6 231 41.1
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 1.1e-26 124.4 78 73.1
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 1.1e-26 124.4 86 68.6
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.5e-26 123.2 226 40.3
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 4.3e-26 122.5 214 36.0
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 5.6e-26 122.1 223 48.0
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 9.6e-26 121.3 229 40.2
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 1.6e-25 120.6 247 44.1
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.1e-25 120.2 230 40.0
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 4.8e-25 119.0 231 37.7
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 4.8e-25 119.0 229 40.6
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 1.1e-24 117.9 224 37.5
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 1.1e-24 117.9 224 37.1
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 1.4e-24 117.5 221 38.0
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 1.8e-24 117.1 224 37.1
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 1.2e-23 114.4 182 50.5
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.5e-23 114.0 222 36.0
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.5e-23 114.0 222 36.0
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 2.6e-23 113.2 100 61.0
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 3.4e-23 112.8 100 61.0
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 3.4e-23 112.8 237 37.1
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 7.6e-23 111.7 79 69.6
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 1.4e-21 107.5 252 34.5
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 1.4e-21 107.5 88 60.2
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 2.5e-21 106.7 84 57.1
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 3.2e-21 106.3 77 62.3
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 3.2e-21 106.3 81 65.4
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 1.2e-20 104.4 101 53.5
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 1.8e-19 100.5 224 34.4
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 1.8e-19 100.5 224 34.4
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.3e-19 100.1 99 52.5
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 2.5e-18 96.7 190 37.4
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 4.3e-18 95.9 224 34.4
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 4.0e-16 89.4 101 45.5
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 1.3e-14 84.3 90 45.6
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.1e-13 81.3 81 50.6
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 6.7e-11 72.0 223 31.8
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.5e-07 59.3 204 31.4
Cpa.g.sc34.169 Carica papaya HOM05D004801 ORTHO05D005747 3.8e-06 56.2 168 30.4


User provided reference genes

Program Settings