Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 1.2e-71 273.1 137 100.0
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 1.0e-38 163.7 123 72.4
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 2.3e-35 152.5 122 68.0
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 3.3e-34 148.7 122 65.6
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 5.9e-23 111.3 121 52.9
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 1.3e-22 110.2 129 48.8
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 1.6e-20 103.2 145 42.8
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 2.1e-20 102.8 143 45.5
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 8.0e-20 100.9 131 44.3
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 6.8e-19 97.8 132 47.7
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 1.2e-18 97.1 146 43.8
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 1.2e-18 97.1 122 46.7
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 4.4e-18 95.1 124 51.6
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 4.4e-18 95.1 147 44.9
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 4.4e-18 95.1 124 46.8
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 7.5e-18 94.4 129 51.2
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 7.5e-18 94.4 129 41.1
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 9.7e-18 94.0 142 45.8
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 9.7e-18 94.0 123 49.6
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 9.7e-18 94.0 123 49.6
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 9.7e-18 94.0 140 42.9
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 1.3e-17 93.6 122 45.1
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 1.7e-17 93.2 120 45.8
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 1.7e-17 93.2 125 48.0
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 2.2e-17 92.8 117 47.0
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 4.1e-16 88.6 145 42.1
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 9.1e-16 87.4 123 44.7
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 9.1e-16 87.4 121 47.9
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 1.2e-15 87.0 123 44.7
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 4.5e-15 85.1 119 45.4
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 5.9e-15 84.7 123 43.1
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 5.9e-15 84.7 120 41.7
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 1.7e-14 83.2 125 45.6
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 2.2e-14 82.8 118 43.2
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 5.0e-14 81.6 132 37.9
HanXRQChr16g0527611 Helianthus annuus HOM05D008187 ORTHO05D009830 6.5e-14 81.3 122 42.6
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 8.5e-14 80.9 141 40.4
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.9e-13 79.7 152 41.4
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 2.5e-13 79.3 130 39.2
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 3.2e-13 79.0 126 43.7
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 5.5e-13 78.2 152 40.8
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 7.2e-13 77.8 152 40.8
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.2e-12 77.0 152 40.8
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.7e-12 75.9 152 40.8
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.6e-12 75.5 152 40.1
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 1.8e-11 73.2 120 41.7
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 2.3e-11 72.8 121 41.3
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 3.0e-11 72.4 120 41.7
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 6.8e-11 71.2 119 36.1
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 6.8e-11 71.2 134 39.6
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 8.8e-11 70.9 135 38.5
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 2.0e-10 69.7 150 38.7
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 2.6e-10 69.3 118 33.9
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 3.4e-10 68.9 125 36.0
Haze_10807 Corylus avellana HOM05D008187 ORTHO05D009830 1.3e-09 67.0 64 62.5
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 2.8e-09 65.9 136 34.6
BcaC04g21548 Brassica carinata HOM05D010619 ORTHO05D009830 3.7e-09 65.5 139 33.8
C09p30500 Brassica napus HOM05D010619 ORTHO05D009830 1.1e-08 63.9 139 33.1
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 1.1e-08 63.9 82 41.5
BolC9t55912H Brassica oleracea HOM05D010619 ORTHO05D009830 1.4e-08 63.5 139 33.1
Sp2g13350 Schrenkiella parvula HOM05D010619 ORTHO05D009830 2.4e-08 62.8 141 33.3
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 3.1e-08 62.4 101 40.6
A09p23610 Brassica napus HOM05D010619 ORTHO05D009830 1.2e-07 60.5 139 33.1
BraA09t37965Z Brassica rapa HOM05D010619 ORTHO05D009830 1.2e-07 60.5 139 33.1
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 3.5e-07 58.9 122 33.6
AT2G01913 Arabidopsis thaliana HOM05D010619 ORTHO05D009830 5.9e-07 58.2 131 32.8
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 1.3e-06 57.0 87 42.5
AL5G11040 Arabidopsis lyrata HOM05D010619 ORTHO05D009830 1.7e-06 56.6 128 32.0
BcaB07g30724 Brassica carinata HOM05D010619 ORTHO05D009830 2.9e-06 55.8 142 33.1
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.9e-06 55.8 115 38.3
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 2.9e-06 55.8 120 36.7
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 5.0e-06 55.1 130 30.0


User provided reference genes

Program Settings