Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 1.2e-124 449.9 239 100.0
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 5.9e-111 404.4 241 88.4
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 2.1e-108 396.0 222 92.8
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 3.7e-105 385.2 241 85.1
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 3.5e-103 378.6 243 84.0
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 5.9e-103 377.9 241 83.8
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 5.9e-103 377.9 241 82.6
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 2.9e-102 375.6 241 82.2
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 6.5e-102 374.4 241 81.7
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 1.1e-101 373.6 245 80.8
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 1.5e-101 373.2 241 81.7
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 2.5e-101 372.5 241 81.3
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 5.5e-101 371.3 242 82.2
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 2.1e-100 369.4 241 80.1
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 2.7e-100 369.0 241 81.7
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 2.7e-100 369.0 241 82.2
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 3.6e-100 368.6 241 80.9
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 3.6e-100 368.6 242 81.4
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 3.6e-100 368.6 240 80.4
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 8.0e-100 367.5 241 79.3
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.4e-99 366.7 241 80.9
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 2.3e-99 365.9 242 81.4
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 4.0e-99 365.2 241 79.3
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 6.7e-99 364.4 241 80.1
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 1.2e-98 363.6 241 79.7
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 2.0e-98 362.8 242 80.2
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 3.3e-98 362.1 242 79.8
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 9.7e-98 360.5 241 79.3
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 1.7e-97 359.8 241 77.6
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 4.8e-97 358.2 241 77.2
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 1.1e-96 357.1 241 78.4
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 5.3e-96 354.8 242 77.7
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 9.1e-96 354.0 241 79.7
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 1.2e-95 353.6 241 78.0
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 5.9e-95 351.3 242 76.9
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 7.7e-95 350.9 242 76.4
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 7.7e-95 350.9 242 76.9
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 1.0e-94 350.5 241 77.2
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.3e-94 350.1 241 76.3
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 1.3e-94 350.1 241 77.2
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 2.9e-94 349.0 242 76.0
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 5.0e-94 348.2 242 77.3
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 6.5e-94 347.8 244 76.6
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 1.1e-93 347.1 242 75.6
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 1.9e-93 346.3 244 76.6
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 2.5e-93 345.9 243 77.0
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 3.2e-93 345.5 241 75.5
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 3.2e-93 345.5 242 76.4
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 4.2e-93 345.1 282 68.4
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 9.4e-93 344.0 241 75.5
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 2.1e-92 342.8 244 76.2
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 3.6e-92 342.0 243 75.7
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 6.1e-92 341.3 241 73.9
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 1.8e-91 339.7 242 74.4
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 3.0e-91 339.0 196 90.3
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 5.2e-91 338.2 220 80.0
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 8.8e-91 337.4 242 73.6
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 1.5e-90 336.7 241 72.2
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 1.5e-90 336.7 245 75.5
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 2.0e-90 336.3 241 74.3
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 2.6e-90 335.9 237 73.8
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 3.4e-90 335.5 242 73.6
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 1.3e-89 333.6 238 75.2
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 1.7e-89 333.2 241 71.0
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 2.2e-89 332.8 242 74.0
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 2.8e-89 332.4 243 73.3
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 3.7e-89 332.0 241 70.1
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 6.3e-89 331.3 219 79.9
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 6.3e-89 331.3 241 74.7
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 8.3e-89 330.9 241 70.1
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 8.3e-89 330.9 241 70.1
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 8.3e-89 330.9 241 73.4
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 1.1e-88 330.5 241 70.1
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.4e-88 330.1 241 70.5
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.4e-88 330.1 241 70.5
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 1.8e-88 329.7 239 74.5
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 3.1e-88 328.9 241 69.3
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 5.4e-88 328.2 241 69.7
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 7.0e-88 327.8 197 86.8
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 9.1e-88 327.4 242 69.8
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 1.2e-87 327.0 196 86.2
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 1.2e-87 327.0 222 75.7
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 5.9e-87 324.7 241 68.5
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 5.9e-87 324.7 243 74.1
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 5.9e-87 324.7 241 68.9
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 1.0e-86 323.9 242 69.4
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 1.0e-86 323.9 242 69.4
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 1.0e-86 323.9 234 72.6
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 1.3e-86 323.6 220 77.7
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 1.3e-86 323.6 245 72.7
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 1.7e-86 323.2 241 71.0
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 1.7e-86 323.2 241 73.0
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 2.3e-86 322.8 196 85.2
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 2.3e-86 322.8 244 72.5
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.9e-86 322.4 241 68.5
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 8.6e-86 320.9 241 68.0
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 8.6e-86 320.9 221 76.0
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 1.1e-85 320.5 244 68.4
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 1.5e-85 320.1 246 67.9
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 1.5e-85 320.1 198 83.3
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 4.2e-85 318.5 244 68.4
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 5.5e-85 318.2 241 67.2
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 7.2e-85 317.8 278 64.4
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 9.5e-85 317.4 290 62.4
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 2.1e-84 316.2 243 70.4
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 4.7e-84 315.1 196 82.7
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 8.0e-84 314.3 244 69.3
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 1.4e-83 313.5 243 69.5
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 1.8e-83 313.2 243 69.1
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.8e-83 313.2 243 67.5
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 2.3e-83 312.8 223 73.5
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 5.2e-83 311.6 222 73.4
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 6.8e-83 311.2 261 66.3
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 1.5e-82 310.1 196 82.7
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 9.8e-82 307.4 222 73.4
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 2.2e-81 306.2 258 66.3
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.7e-81 305.4 199 79.4
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 4.9e-81 305.1 199 79.9
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 6.3e-81 304.7 199 79.4
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 1.4e-80 303.5 285 61.8
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.1e-80 302.4 204 77.5
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 9.2e-80 300.8 196 78.6
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 1.2e-79 300.4 258 65.5
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 2.9e-78 295.8 244 65.2
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 3.3e-77 292.4 231 68.4
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 4.3e-77 292.0 244 64.8
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 4.1e-72 275.4 196 69.9
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 5.0e-70 268.5 179 78.2
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 1.5e-69 266.9 175 78.3
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 2.3e-67 259.6 242 60.7
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 2.6e-66 256.1 220 64.5
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 1.3e-65 253.8 188 69.7
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 8.6e-62 241.1 196 67.9
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 3.5e-55 219.2 155 73.5
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 6.0e-55 218.4 135 81.5
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 1.0e-54 217.6 223 55.6
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 3.2e-48 196.1 155 65.8
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.2e-42 177.6 149 65.8
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 6.4e-41 171.8 130 70.0
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 7.1e-40 168.3 112 78.6
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 2.1e-36 156.8 162 56.8
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 9.9e-34 147.9 235 46.4
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 5.4e-32 142.1 223 36.8
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 7.1e-32 141.7 198 41.4
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 1.6e-28 130.6 223 42.2
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 3.1e-27 126.3 217 35.5
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.7e-25 120.6 236 41.1
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 1.5e-21 107.5 225 33.3
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 1.5e-21 107.5 99 60.6
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 4.3e-21 105.9 215 34.4
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 4.8e-20 102.4 69 76.8
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.2e-18 97.8 177 42.9
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 1.0e-17 94.7 63 79.4
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 1.5e-13 80.9 59 69.5
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 3.7e-12 76.3 64 64.1
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 6.1e-07 58.9 41 75.6
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 1.0e-06 58.2 40 77.5


User provided reference genes

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