Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 0.0e+00 1091.6 540 100.0
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 2.5e-274 948.3 541 85.4
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 9.4e-274 946.4 541 84.8
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.4e-253 879.4 541 81.5
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 2.4e-205 719.2 541 64.0
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 4.6e-204 714.9 542 62.0
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 3.1e-200 702.2 541 61.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.3e-198 696.8 568 58.8
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 1.1e-197 693.7 541 61.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 2.4e-197 692.6 541 61.4
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 2.7e-196 689.1 541 60.6
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 3.7e-193 678.7 542 60.1
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.2e-191 673.7 542 59.8
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.7e-190 669.8 541 60.1
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 4.9e-190 668.3 541 59.1
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 4.9e-190 668.3 540 57.6
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.2e-189 665.2 543 59.7
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 5.5e-189 664.8 540 59.3
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.9e-187 658.7 541 59.3
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 1.5e-186 656.8 541 57.9
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 2.5e-186 656.0 542 59.0
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.5e-186 656.0 541 59.1
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 9.6e-186 654.1 543 59.1
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.6e-185 653.3 543 58.6
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.1e-185 652.9 541 59.0
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 8.2e-185 651.0 541 56.9
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 2.4e-184 649.4 543 60.0
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.4e-183 645.6 541 56.4
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.4e-183 645.6 542 57.4
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 5.8e-183 644.8 541 57.5
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 6.5e-182 641.3 541 56.9
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 6.5e-182 641.3 541 55.8
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.5e-181 639.4 542 55.5
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 2.5e-181 639.4 542 57.6
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 3.2e-181 639.0 541 56.7
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.0e-179 634.0 540 55.7
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.0e-179 634.0 544 56.2
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.3e-179 633.6 541 56.4
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.8e-179 633.3 542 56.8
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 3.9e-179 632.1 542 55.5
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 6.7e-179 631.3 543 56.0
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 8.7e-179 630.9 544 57.5
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 1.1e-178 630.6 545 56.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 2.5e-178 629.4 540 57.8
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 3.3e-178 629.0 541 56.7
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 4.8e-177 625.2 541 55.5
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 4.1e-176 622.1 542 53.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 5.3e-176 621.7 542 57.7
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.2e-175 620.5 542 53.7
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.2e-175 620.5 542 53.7
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 5.9e-175 618.2 542 53.1
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 7.6e-175 617.8 540 54.8
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 7.6e-175 617.8 543 53.0
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 1.0e-174 617.5 542 53.5
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.7e-174 616.7 543 53.2
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 2.2e-174 616.3 543 53.4
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 8.5e-174 614.4 543 55.6
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.9e-173 613.2 540 56.5
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.9e-173 613.2 541 55.5
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.2e-172 610.5 543 54.9
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 1.2e-172 610.5 542 53.9
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 2.3e-171 606.3 543 54.9
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.5e-170 603.6 540 53.9
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 4.3e-170 602.1 542 54.4
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 1.3e-169 600.5 537 53.8
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.3e-169 600.5 540 54.1
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 4.8e-169 598.6 543 53.0
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.1e-168 597.4 542 53.9
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.4e-168 597.0 601 51.9
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.4e-168 597.0 563 51.9
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.1e-168 595.9 543 53.4
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.5e-167 593.6 540 53.7
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.0e-167 593.2 574 50.3
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 4.5e-167 592.0 492 57.5
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-166 590.5 541 51.8
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.9e-166 589.3 470 60.2
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 2.5e-165 586.3 492 57.5
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 5.5e-165 585.1 634 47.5
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 5.5e-165 585.1 536 52.2
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 2.7e-164 582.8 541 51.6
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 4.7e-164 582.0 548 53.5
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 3.0e-163 579.3 548 53.3
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 6.7e-163 578.2 541 52.3
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 9.7e-162 574.3 544 53.1
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 2.8e-153 546.2 542 49.1
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.9e-151 538.5 427 62.3
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.9e-150 536.2 457 53.6
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 4.5e-143 512.3 593 44.7
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.6e-140 503.8 544 47.2
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.8e-139 500.4 471 52.2
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.2e-135 487.6 447 52.3
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 5.0e-134 482.3 560 46.8
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 9.5e-133 478.0 540 47.8
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 5.2e-131 472.2 486 49.0
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.6e-127 460.7 555 45.4
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 3.8e-126 456.1 558 45.0
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.6e-125 452.2 553 43.0
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.9e-117 427.2 309 65.7
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 4.1e-112 409.5 503 42.9
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.2e-100 371.3 401 45.6
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.2e-88 330.1 559 33.8
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.5e-82 311.2 564 33.3
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 3.7e-76 290.0 223 62.3
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.2e-74 285.0 571 34.2
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 4.5e-74 283.1 581 32.9
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 9.9e-74 282.0 563 33.9
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 2.2e-73 280.8 486 35.2
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 6.3e-60 236.1 208 53.8
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.4e-50 203.8 179 54.7
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 2.6e-45 187.6 259 38.6
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.4e-43 181.8 109 76.1
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 7.5e-29 132.9 125 53.6
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.7e-28 131.7 189 40.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 8.3e-28 129.4 76 78.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 1.1e-27 129.0 119 47.9
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 3.8e-17 94.0 62 59.7
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 7.0e-11 73.2 98 44.9
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 1.1e-08 65.9 57 54.4


User provided reference genes

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