Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002684 Sechium edule HOM05D013362 ORTHO05D013626 7.8e-206 720.3 386 100.0
Sed0004924 Sechium edule HOM05D013362 ORTHO05D013626 2.3e-104 383.3 275 73.8
Sed0014415 Sechium edule HOM05D013362 ORTHO05D013626 2.7e-97 359.8 371 59.8
Sed0023167 Sechium edule HOM05D013362 ORTHO05D013626 3.6e-94 349.4 253 74.7
Sed0019183 Sechium edule HOM05D013362 ORTHO05D013626 3.2e-82 309.7 419 48.0
Sed0012267 Sechium edule HOM05D013362 ORTHO05D013626 1.9e-50 204.1 158 69.0
Sed0007316 Sechium edule HOM05D013362 ORTHO05D013626 1.9e-47 194.1 150 70.7
Sed0016061 Sechium edule HOM05D000346 ORTHO05D000326 7.4e-31 139.0 123 65.9
Sed0009053 Sechium edule HOM05D015538 ORTHO05D013626 1.9e-26 124.4 246 33.7
Sed0020906 Sechium edule HOM05D013362 ORTHO05D013626 6.1e-25 119.4 309 34.0
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 8.0e-25 119.0 160 40.0
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 9.7e-23 112.1 182 36.3
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 4.8e-22 109.8 92 52.2
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 3.5e-20 103.6 93 48.4
Sed0026090 Sechium edule HOM05D001030 ORTHO05D002278 1.5e-15 88.2 133 40.6
Sed0013202 Sechium edule HOM05D015538 ORTHO05D013626 4.4e-15 86.7 216 30.6
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.8e-14 83.2 110 36.4
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.8e-14 83.2 112 37.5
MELO3C032179.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.8e-14 83.2 110 36.4
Sed0006860 Sechium edule HOM05D022877 ORTHO05D013626 4.8e-14 83.2 359 29.0
MELO3C028809.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.1e-13 82.0 94 38.3
MELO3C033964.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.4e-13 80.9 243 25.5
Sed0015251 Sechium edule HOM05D022877 ORTHO05D013626 2.4e-13 80.9 135 40.0
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.7e-12 77.4 251 28.7
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 5.9e-12 76.3 103 36.9
Sed0021824 Sechium edule HOM05D013362 ORTHO05D013626 7.7e-12 75.9 36 97.2
Sed0008642 Sechium edule HOM05D015538 ORTHO05D013626 1.3e-11 75.1 177 34.5
ClCG02G010270 Citrullus lanatus HOM05D007907 ORTHO05D020468 3.8e-11 73.6 232 31.0
Sed0027769 Sechium edule HOM05D028453 ORTHO05D009079 3.8e-11 73.6 283 26.1
MELO3C032947.2 Cucumis melo HOM05D017798 ORTHO05D020468 1.1e-10 72.0 64 48.4
MELO3C032715.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.3e-10 70.5 96 34.4
Sed0025466 Sechium edule HOM05D007907 ORTHO05D009079 5.5e-10 69.7 94 34.0
MELO3C000001.2 Cucumis melo HOM05D017798 ORTHO05D020468 2.1e-09 67.8 79 40.5
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.1e-09 66.2 112 33.9
Sed0001617 Sechium edule HOM05D013362 ORTHO05D013626 1.0e-08 65.5 131 38.9
Sed0005270 Sechium edule HOM05D013362 ORTHO05D013626 1.0e-08 65.5 51 60.8
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.4e-08 65.1 116 32.8
Sed0011016 Sechium edule HOM05D007907 ORTHO05D009079 1.4e-08 65.1 141 31.9
MELO3C027609.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.8e-08 64.7 116 32.8
MELO3C028439.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.0e-08 63.9 100 33.0
MELO3C033168.2 Cucumis melo HOM05D026391 ORTHO05D009079 4.0e-08 63.5 128 30.5
MELO3C028249.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.2e-07 62.0 100 33.0
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.5e-07 61.6 102 30.4
MELO3C030511.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.0e-07 61.2 116 31.9
CsaV3_3G032530 Cucumis sativus L. HOM05D008761 ORTHO05D009079 2.0e-07 61.2 100 32.0
CsaV3_2G032890 Cucumis sativus L. HOM05D008761 ORTHO05D009079 2.6e-07 60.8 100 32.0
CsaV3_2G013490 Cucumis sativus L. HOM05D008761 ORTHO05D009079 3.4e-07 60.5 100 30.0
Sed0006677 Sechium edule HOM05D007907 ORTHO05D009079 4.4e-07 60.1 59 42.4
Sed0005406 Sechium edule HOM05D015538 ORTHO05D013626 7.5e-07 59.3 146 30.8
MELO3C033891.2 Cucumis melo HOM05D008761 ORTHO05D009079 9.8e-07 58.9 93 31.2
MELO3C034600.2 Cucumis melo HOM05D008761 ORTHO05D009079 9.8e-07 58.9 99 32.3
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.8e-07 58.9 109 29.4
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 1.3e-06 58.5 119 31.9
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.7e-06 58.2 102 29.4
MELO3C027792.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.2e-06 57.8 86 32.6
Sed0023929 Sechium edule HOM05D007907 ORTHO05D009079 2.2e-06 57.8 150 28.7
MELO3C032062.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.8e-06 57.4 93 30.1
Oeu043051.1 Olea europaea HOM05D008585 ORTHO05D000397 6.3e-06 56.2 93 33.3
Sopen07g007480 Solanum pennellii HOM05D007732 ORTHO05D010105 8.3e-06 55.8 137 27.7


User provided reference genes

Program Settings