Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 3.3e-46 188.0 91 100.0
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 1.2e-35 152.9 91 80.2
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 1.3e-31 139.4 90 74.4
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 6.7e-31 137.1 91 75.8
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 4.3e-30 134.4 90 73.3
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 1.4e-20 102.8 91 56.0
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 4.5e-19 97.8 89 55.1
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 5.9e-19 97.4 95 56.8
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 1.4e-15 86.3 93 48.4
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 5.1e-15 84.3 91 49.5
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 8.8e-15 83.6 92 48.9
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 1.1e-14 83.2 97 47.4
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.9e-14 82.4 93 50.5
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.9e-14 82.4 82 50.0
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 1.9e-14 82.4 82 50.0
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 4.3e-14 81.3 82 48.8
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 4.3e-14 81.3 85 49.4
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 4.3e-14 81.3 85 49.4
Potri.015G062300 Populus trichocarpa HOM05D007106 ORTHO05D007770 5.7e-14 80.9 90 46.7
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.3e-13 79.7 86 55.8
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 1.7e-13 79.3 88 55.7
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 2.2e-13 79.0 90 46.7
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 2.2e-13 79.0 91 48.4
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 2.2e-13 79.0 90 46.7
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 2.2e-13 79.0 91 48.4
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 2.2e-13 79.0 90 52.2
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 2.8e-13 78.6 86 48.8
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 2.8e-13 78.6 86 48.8
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 8.2e-13 77.0 93 49.5
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 1.1e-12 76.6 80 50.0
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 1.1e-12 76.6 96 49.0
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 1.1e-12 76.6 79 54.4
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.4e-12 76.3 81 53.1
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.8e-12 75.9 96 53.1
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 2.4e-12 75.5 86 47.7
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 2.4e-12 75.5 76 53.9
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 3.1e-12 75.1 93 46.2
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 5.3e-12 74.3 94 50.0
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 6.9e-12 73.9 89 49.4
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.2e-11 73.2 90 50.0
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.2e-11 73.2 90 50.0
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.5e-11 71.2 78 52.6
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 5.9e-11 70.9 88 50.0
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 5.9e-11 70.9 77 51.9
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 7.7e-11 70.5 89 51.7
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.7e-10 69.3 88 46.6
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 1.7e-10 69.3 83 47.0
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 2.2e-10 68.9 97 42.3
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 2.9e-10 68.6 94 47.9
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 3.8e-10 68.2 91 45.1
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 5.0e-10 67.8 93 41.9
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 8.5e-10 67.0 77 49.4
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.2e-09 65.1 86 41.9
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 3.2e-09 65.1 82 46.3
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 4.2e-09 64.7 91 42.9
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 7.2e-09 63.9 93 44.1
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 9.4e-09 63.5 80 46.2
Eucgr.B00514 Eucalyptus grandis HOM05D007106 ORTHO05D007770 1.2e-08 63.2 90 42.2
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 1.2e-08 63.2 96 46.9
Haze_12000 Corylus avellana HOM05D007106 ORTHO05D007770 2.1e-08 62.4 80 45.0
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 2.7e-08 62.0 90 41.1
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 4.7e-08 61.2 93 46.2
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 4.7e-08 61.2 79 46.8
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 6.1e-08 60.8 91 44.0
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 7.9e-08 60.5 89 42.7
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 1.0e-07 60.1 87 40.2
TAR622G1352 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.0e-07 60.1 78 46.2
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.4e-07 59.7 90 42.2
Lj1g0012300 Lotus japonicus HOM05D007106 ORTHO05D007770 1.8e-07 59.3 72 45.8
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 1.8e-07 59.3 100 44.0
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 2.3e-07 58.9 92 41.3
HanXRQChr05g0155941 Helianthus annuus HOM05D007106 ORTHO05D007770 3.0e-07 58.5 66 51.5
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 3.0e-07 58.5 86 45.3
Lsat_1_v5_gn_1_14001 Lactuca sativa HOM05D046857 ORTHO05D048244 5.1e-07 57.8 76 44.7
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 6.7e-07 57.4 84 44.0
Aqoxy3G03422 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 8.8e-07 57.0 88 43.2
Cc11_g12880 Coffea canephora HOM05D007106 ORTHO05D007770 8.8e-07 57.0 80 43.8
Glyma.17G100900 Glycine max HOM05D007106 ORTHO05D007770 8.8e-07 57.0 80 40.0
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 8.8e-07 57.0 90 42.2
TPR.G11889 Trifolium pratense HOM05D007106 ORTHO05D007770 8.8e-07 57.0 86 44.2
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 1.5e-06 56.2 83 39.8
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.5e-06 56.2 80 43.8
TAR371G0193 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.5e-06 56.2 84 42.9
Carub.0005s1360 Capsella rubella HOM05D012999 ORTHO05D007770 2.6e-06 55.5 91 42.9
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 3.3e-06 55.1 85 40.0
DCAR_020650 Daucus carota HOM05D007691 ORTHO05D008758 4.4e-06 54.7 86 38.4
Lj4g0015417 Lotus japonicus HOM05D007106 ORTHO05D007770 4.4e-06 54.7 86 43.0
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 4.4e-06 54.7 83 44.6
QL03p068707 Quercus lobata HOM05D007106 ORTHO05D007770 4.4e-06 54.7 79 39.2
Haze_07318 Corylus avellana HOM05D007106 ORTHO05D007770 5.7e-06 54.3 42 64.3
ECA246G3640 Erigeron canadensis HOM05D007106 ORTHO05D007770 5.7e-06 54.3 92 43.5
Medtr3g435530 Medicago truncatula HOM05D007106 ORTHO05D007770 7.4e-06 53.9 85 41.2
ATR0564G057 Amborella trichopoda HOM05D007106 ORTHO05D007770 9.7e-06 53.5 76 38.2


User provided reference genes

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