Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002625 Sechium edule HOM05D008150 ORTHO05D010312 1.3e-182 642.9 307 100.0
Sed0009722 Sechium edule HOM05D008150 ORTHO05D010312 6.5e-62 241.9 304 46.7
CsaV3_1G039380 Cucumis sativus L. HOM05D008150 ORTHO05D010312 8.0e-44 181.8 313 39.3
ClCG03G016610 Citrullus lanatus HOM05D008150 ORTHO05D010312 8.8e-43 178.3 314 38.5
MELO3C015364.2 Cucumis melo HOM05D008150 ORTHO05D010312 8.8e-43 178.3 322 39.1
ClCG01G022200 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.5e-39 166.4 303 38.0
MELO3C007368.2 Cucumis melo HOM05D008150 ORTHO05D010312 1.2e-36 157.9 307 38.1
CsaV3_6G049300 Cucumis sativus L. HOM05D008150 ORTHO05D010312 1.0e-35 154.8 309 36.6
Sed0002875 Sechium edule HOM05D008150 ORTHO05D010312 2.8e-33 146.7 318 34.6
Sed0009586 Sechium edule HOM05D008150 ORTHO05D010312 1.6e-28 131.0 231 40.7
Sed0015391 Sechium edule HOM05D008150 ORTHO05D010312 5.2e-27 125.9 294 35.4
ClCG10G014280 Citrullus lanatus HOM05D008150 ORTHO05D010312 5.7e-26 122.5 299 33.1
ClCG01G025230 Citrullus lanatus HOM05D008150 ORTHO05D010312 3.7e-25 119.8 266 33.5
Sed0025201 Sechium edule HOM05D008150 ORTHO05D010312 1.4e-24 117.9 278 33.8
Sed0008558 Sechium edule HOM05D008150 ORTHO05D010312 7.8e-23 112.1 226 35.0
Sed0011109 Sechium edule HOM05D008150 ORTHO05D010312 2.3e-22 110.5 313 32.3
Sed0001873 Sechium edule HOM05D008150 ORTHO05D010312 3.6e-20 103.2 271 34.3
Sed0007116 Sechium edule HOM05D008150 ORTHO05D010312 1.0e-19 101.7 300 31.7
CsaV3_3G042340 Cucumis sativus L. HOM05D008150 ORTHO05D010312 7.5e-18 95.5 335 28.4
CsaV3_3G042360 Cucumis sativus L. HOM05D008150 ORTHO05D010312 7.5e-18 95.5 325 28.3
Sed0000179 Sechium edule HOM05D008150 ORTHO05D010312 7.5e-18 95.5 306 26.1
Sed0019166 Sechium edule HOM05D008150 ORTHO05D010312 9.8e-18 95.1 272 29.0
ClCG11G005160 Citrullus lanatus HOM05D008150 ORTHO05D010312 1.3e-17 94.7 293 26.3
Sed0000604 Sechium edule HOM05D008150 ORTHO05D010312 1.7e-17 94.4 319 31.0
CsaV3_6G007970 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.7e-17 93.2 245 33.5
MELO3C002009.2 Cucumis melo HOM05D008150 ORTHO05D010312 8.3e-17 92.0 310 28.1
CsaV3_1G002720 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.2e-16 90.1 276 29.0
Sed0016315 Sechium edule HOM05D008150 ORTHO05D010312 7.0e-16 89.0 323 28.8
CsaV3_6G008010 Cucumis sativus L. HOM05D008150 ORTHO05D010312 9.2e-16 88.6 312 27.9
ClCG11G005140 Citrullus lanatus HOM05D008150 ORTHO05D010312 2.0e-15 87.4 255 30.2
MELO3C035228.2 Cucumis melo HOM05D008150 ORTHO05D010312 2.3e-14 84.0 253 32.0
Sed0020127 Sechium edule HOM05D008150 ORTHO05D010312 3.3e-13 80.1 299 25.1
CsaV3_1G005780 Cucumis sativus L. HOM05D008150 ORTHO05D010312 2.1e-12 77.4 308 29.5
Sed0019399 Sechium edule HOM05D008150 ORTHO05D010312 4.7e-12 76.3 263 25.9
MELO3C022333.2 Cucumis melo HOM05D002645 ORTHO05D002741 6.8e-11 72.4 234 24.4
PSO478G2862 Papaver somniferum HOM05D000007 ORTHO05D000017 6.4e-09 65.9 306 24.5
PSO832G3431 Papaver somniferum HOM05D000007 ORTHO05D000676 8.3e-09 65.5 277 26.0
TAR626G1315 Trochodendron aralioides HOM05D000007 ORTHO05D000521 1.4e-08 64.7 276 26.8
FAN05G1881 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.9e-08 64.3 301 21.6
PSO675G8644 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-08 63.9 273 24.9
DCAR_016400 Daucus carota HOM05D000007 ORTHO05D000521 3.2e-08 63.5 261 25.7
PSO339G4553 Papaver somniferum HOM05D000007 ORTHO05D000017 4.1e-08 63.2 286 25.9
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.4e-08 62.8 283 24.7
PSO384G0265 Papaver somniferum HOM05D000007 ORTHO05D000017 9.2e-08 62.0 279 24.7
PSO478G2201 Papaver somniferum HOM05D000007 ORTHO05D000017 9.2e-08 62.0 279 26.9
Rhsim07G0064300 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.2e-08 62.0 284 26.1
PSO421G0629 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-07 60.8 293 26.6
PSO675G3769 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-07 60.8 262 24.8
Dinv12552 Davidia involucrata HOM05D000007 ORTHO05D000521 3.5e-07 60.1 185 29.7
Rhsim07G0064100 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.0e-07 59.3 280 25.7
FvH4_6g52062 Fragaria vesca HOM05D000664 ORTHO05D000491 1.3e-06 58.2 305 21.6
FvH4_6g52080 Fragaria vesca HOM05D000664 ORTHO05D000491 1.3e-06 58.2 305 21.6
FAN05G1384 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-06 58.2 256 25.4
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.3e-06 58.2 321 21.8
Rhsim01G0072600 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.7e-06 57.8 222 30.2
Rhsim07G0064700 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.3e-06 57.4 313 24.9
PSO210G5368 Papaver somniferum HOM05D000007 ORTHO05D000017 3.9e-06 56.6 283 23.7
PSO384G0388 Papaver somniferum HOM05D000007 ORTHO05D000676 6.6e-06 55.8 177 29.4


User provided reference genes

Program Settings