Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 1.1e-40 169.5 83 100.0
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 1.0e-22 109.8 87 64.4
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 5.3e-19 97.4 85 62.4
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 3.8e-17 91.3 83 60.2
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 6.5e-17 90.5 83 59.0
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 6.5e-17 90.5 81 56.8
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 2.5e-16 88.6 80 57.5
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.2e-15 86.3 81 56.8
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.2e-15 86.3 79 55.7
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 1.6e-15 85.9 80 56.2
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.1e-15 85.5 78 53.8
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 6.1e-15 84.0 82 54.9
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.0e-15 83.6 83 54.2
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 1.0e-14 83.2 71 57.7
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.0e-14 83.2 82 53.7
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.0e-14 83.2 73 57.5
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 1.8e-14 82.4 73 57.5
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 1.8e-14 82.4 87 48.3
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 2.3e-14 82.0 79 54.4
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 4.0e-14 81.3 85 49.4
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 5.2e-14 80.9 79 51.9
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 5.2e-14 80.9 74 55.4
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 5.2e-14 80.9 82 54.9
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 6.8e-14 80.5 83 53.0
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 8.8e-14 80.1 80 53.8
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 1.2e-13 79.7 84 53.6
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 1.2e-13 79.7 71 54.9
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 1.5e-13 79.3 90 51.1
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.0e-13 79.0 80 55.0
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 2.0e-13 79.0 84 52.4
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 2.6e-13 78.6 86 53.5
A09p59550 Brassica napus HOM05D003533 ORTHO05D004009 4.4e-13 77.8 85 48.2
Carub.0005s1428 Capsella rubella HOM05D003533 ORTHO05D004009 4.4e-13 77.8 73 54.8
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 7.5e-13 77.0 80 53.8
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 7.5e-13 77.0 82 54.9
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 9.8e-13 76.6 86 50.0
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 1.3e-12 76.3 80 51.2
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 1.3e-12 76.3 81 54.3
Sp1g16980 Schrenkiella parvula HOM05D003533 ORTHO05D004009 1.3e-12 76.3 87 46.0
Thhalv10010873m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 1.7e-12 75.9 76 52.6
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 1.7e-12 75.9 73 56.2
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 2.2e-12 75.5 80 48.8
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.2e-12 75.5 80 53.8
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.2e-12 75.5 80 53.8
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.2e-12 75.5 73 54.8
Migut.I00058 Erythranthe guttata HOM05D003533 ORTHO05D004009 3.7e-12 74.7 68 55.9
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 3.7e-12 74.7 76 48.7
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 4.8e-12 74.3 72 51.4
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 4.8e-12 74.3 72 51.4
Thhalv10009213m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 4.8e-12 74.3 89 46.1
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 4.8e-12 74.3 81 49.4
Aa31LG4G16780 Aethionema arabicum HOM05D003533 ORTHO05D004009 8.3e-12 73.6 79 53.2
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 1.1e-11 73.2 82 48.8
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 1.1e-11 73.2 82 48.8
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 1.1e-11 73.2 73 52.1
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.1e-11 73.2 73 50.7
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 1.1e-11 73.2 77 49.4
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.8e-11 72.4 78 50.0
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.8e-11 72.4 83 48.2
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 1.8e-11 72.4 73 47.9
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.4e-11 72.0 73 49.3
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.1e-11 71.6 73 50.7
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 3.1e-11 71.6 83 49.4
A06p15230 Brassica napus HOM05D003533 ORTHO05D004009 4.1e-11 71.2 86 46.5
BraA06t24637Z Brassica rapa HOM05D003533 ORTHO05D004009 4.1e-11 71.2 86 46.5
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 5.4e-11 70.9 87 44.8
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 5.4e-11 70.9 89 49.4
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 7.0e-11 70.5 79 49.4
ClCG06G016690 Citrullus lanatus HOM05D003533 ORTHO05D004009 9.1e-11 70.1 58 67.2
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 9.1e-11 70.1 73 49.3
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 1.2e-10 69.7 88 42.0
Sed0014302 Sechium edule HOM05D003533 ORTHO05D004009 1.2e-10 69.7 90 48.9
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 1.6e-10 69.3 85 48.2
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 2.7e-10 68.6 71 49.3
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 3.5e-10 68.2 84 50.0
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 3.5e-10 68.2 73 52.1
CARHR156900 Cardamine hirsuta HOM05D003533 ORTHO05D004009 4.5e-10 67.8 76 47.4
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 4.5e-10 67.8 82 47.6
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 4.5e-10 67.8 72 51.4
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 4.5e-10 67.8 85 50.6
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 7.7e-10 67.0 73 46.6
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 7.7e-10 67.0 79 48.1
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 7.7e-10 67.0 67 53.7
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 1.0e-09 66.6 79 48.1
Lalb_Chr12g0201351 Lupinus albus HOM05D003533 ORTHO05D004009 1.0e-09 66.6 81 49.4
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 1.0e-09 66.6 85 43.5
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 1.0e-09 66.6 78 46.2
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 1.0e-09 66.6 73 46.6
C08p19120 Brassica napus HOM05D003533 ORTHO05D004009 1.3e-09 66.2 59 52.5
Solyc03g113810.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.7e-09 65.9 77 51.9
MBI14_g31147_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 2.2e-09 65.5 78 43.6
Sopen03g032860 Solanum pennellii HOM05D003533 ORTHO05D004009 2.2e-09 65.5 83 51.8
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 2.2e-09 65.5 77 44.2
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 2.2e-09 65.5 73 49.3
Actinidia19080 Actinidia chinensis HOM05D003533 ORTHO05D004009 2.9e-09 65.1 56 57.1
BolC8t49535H Brassica oleracea HOM05D003533 ORTHO05D004009 6.5e-09 63.9 59 50.8
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 6.5e-09 63.9 73 46.6
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 1.1e-08 63.2 73 50.7
Rhsim12G0161400 Rhododendron simsii HOM05D003533 ORTHO05D004009 1.1e-08 63.2 73 49.3
PGSC0003DMG400024583 Solanum tuberosum HOM05D003533 ORTHO05D004009 1.1e-08 63.2 78 47.4
Aa31LG7G3800 Aethionema arabicum HOM05D006783 ORTHO05D008330 1.5e-08 62.8 69 47.8
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 1.5e-08 62.8 80 45.0
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.9e-08 62.4 78 48.7
MBI14_g31145_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 2.5e-08 62.0 78 44.9
Carub.0001s1865 Capsella rubella HOM05D003533 ORTHO05D004009 4.2e-08 61.2 82 39.0
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 4.2e-08 61.2 80 47.5
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 4.2e-08 61.2 79 48.1
Zm00001eb254120 Zea mays HOM05D003533 ORTHO05D004009 4.2e-08 61.2 71 47.9
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 5.5e-08 60.8 73 45.2
Os02g0740600 Oryza sativa ssp. japonica HOM05D003533 ORTHO05D004009 5.5e-08 60.8 73 46.6
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 5.5e-08 60.8 89 41.6
Cfa009093 Carpinus fangiana HOM05D003533 ORTHO05D004009 9.4e-08 60.1 90 42.2
DCAR_016506 Daucus carota HOM05D003533 ORTHO05D004009 9.4e-08 60.1 80 48.8
SalBow5G4118 Salvia bowleyana HOM05D003533 ORTHO05D004009 9.4e-08 60.1 51 56.9
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 1.2e-07 59.7 93 47.3
BraA09t41332Z Brassica rapa HOM05D003533 ORTHO05D004009 1.2e-07 59.7 78 44.9
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.2e-07 59.7 89 41.6
CDE07G1253 Ceratophyllum demersum HOM05D000502 ORTHO05D000356 1.6e-07 59.3 75 42.7
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 1.6e-07 59.3 91 41.8
THA.LOC109116474 Tarenaya hassleriana HOM05D003533 ORTHO05D004009 1.6e-07 59.3 80 41.2
BcaC05g25801 Brassica carinata HOM05D003533 ORTHO05D004009 2.1e-07 58.9 86 39.5
BcaC05g25802 Brassica carinata HOM05D003533 ORTHO05D004009 2.1e-07 58.9 86 39.5
C05p17410 Brassica napus HOM05D003533 ORTHO05D004009 2.1e-07 58.9 86 39.5
BolC5t30441H Brassica oleracea HOM05D003533 ORTHO05D004009 2.1e-07 58.9 86 39.5
ECA247G3580 Erigeron canadensis HOM05D003533 ORTHO05D004009 2.1e-07 58.9 78 41.0
Gohir.D05G321600 Gossypium hirsutum HOM05D003533 ORTHO05D004009 2.1e-07 58.9 71 42.3
Gorai.009G345100 Gossypium raimondii HOM05D003533 ORTHO05D004009 2.1e-07 58.9 71 42.3
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 2.1e-07 58.9 73 46.6
Rhsim12G0161300 Rhododendron simsii HOM05D003533 ORTHO05D004009 2.1e-07 58.9 68 47.1
Gohir.A05G319400 Gossypium hirsutum HOM05D003533 ORTHO05D004009 2.7e-07 58.5 71 42.3
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.7e-07 58.5 90 40.0
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.7e-07 58.5 80 43.8
ATR0712G042 Amborella trichopoda HOM05D003533 ORTHO05D004009 3.6e-07 58.2 76 40.8
C08p42830 Brassica napus HOM05D003533 ORTHO05D004009 3.6e-07 58.2 78 43.6
BolC8t51839H Brassica oleracea HOM05D003533 ORTHO05D004009 3.6e-07 58.2 78 43.6
Hma1.2p1_0572F.1_g180980 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 3.6e-07 58.2 73 42.5
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 4.7e-07 57.8 92 43.5
HanXRQChr09g0271891 Helianthus annuus HOM05D003533 ORTHO05D004009 6.1e-07 57.4 74 45.9
ATR0712G093 Amborella trichopoda HOM05D003533 ORTHO05D004009 8.0e-07 57.0 76 40.8
Actinidia34961 Actinidia chinensis HOM05D003533 ORTHO05D004009 1.0e-06 56.6 80 42.5
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.0e-06 56.6 72 45.8
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 1.4e-06 56.2 82 45.1
MBI14_g31148_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D011084 1.8e-06 55.8 71 43.7
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 2.3e-06 55.5 72 43.1
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.3e-06 55.5 88 43.2
Os06g0239200 Oryza sativa ssp. japonica HOM05D003533 ORTHO05D004009 2.3e-06 55.5 67 43.3
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 2.3e-06 55.5 72 45.8
Ciclev10033215m.g Citrus clementina HOM05D003533 ORTHO05D004009 4.0e-06 54.7 79 44.3
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 4.0e-06 54.7 83 39.8
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 4.0e-06 54.7 83 39.8
HanXRQChr04g0107311 Helianthus annuus HOM05D003533 ORTHO05D004009 5.2e-06 54.3 75 44.0
Eucgr.C02738 Eucalyptus grandis HOM05D003533 ORTHO05D004009 6.8e-06 53.9 86 41.9
THA.LOC104821473 Tarenaya hassleriana HOM05D003533 ORTHO05D004009 6.8e-06 53.9 79 39.2


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