Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 0.0e+00 1206.8 664 100.0
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 3.2e-159 566.2 767 48.8
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 2.0e-148 530.4 672 50.4
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 1.7e-147 527.3 775 46.2
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.5e-145 519.6 728 47.3
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.1e-138 496.1 713 47.3
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.6e-137 494.2 710 46.5
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 3.3e-135 486.5 728 43.4
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 3.3e-135 486.5 732 44.7
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 1.2e-134 484.6 766 43.6
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 1.4e-133 481.1 709 46.8
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 5.2e-133 479.2 825 41.5
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 8.3e-131 471.9 718 44.3
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 7.1e-130 468.8 697 45.3
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.2e-129 468.0 544 50.9
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 2.7e-129 466.8 549 52.5
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.8e-129 465.3 703 45.5
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 6.6e-128 462.2 560 49.8
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.5e-127 461.1 736 45.2
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 4.3e-127 459.5 705 45.1
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 1.8e-125 454.1 753 42.8
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 6.8e-125 452.2 683 44.9
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 6.8e-125 452.2 565 48.8
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 8.9e-125 451.8 751 44.2
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 2.6e-124 450.3 789 39.9
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 2.6e-124 450.3 727 43.2
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 5.8e-124 449.1 721 44.1
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 7.6e-124 448.7 762 41.3
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 9.9e-124 448.4 551 51.4
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 1.3e-123 448.0 543 49.2
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.2e-123 447.2 722 43.9
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 2.2e-123 447.2 763 41.7
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 1.4e-122 444.5 764 41.1
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.4e-122 444.5 539 50.6
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 4.1e-122 443.0 764 41.0
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 2.7e-121 440.3 549 48.3
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 3.9e-120 436.4 690 43.2
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 5.1e-120 436.0 722 42.2
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 6.6e-120 435.6 721 42.2
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 2.2e-115 420.6 548 48.4
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.4e-114 417.2 745 38.3
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 5.4e-114 416.0 803 38.1
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.6e-113 414.5 724 40.2
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 6.0e-113 412.5 553 45.9
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 5.6e-111 406.0 729 40.1
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.3e-110 404.8 796 37.1
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.6e-110 404.4 727 40.2
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.6e-110 404.4 727 40.2
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.4e-109 401.4 743 39.7
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 9.0e-109 398.7 717 39.3
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.5e-108 397.9 765 39.2
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.5e-108 397.9 712 39.0
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.0e-108 397.5 814 36.5
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.5e-108 396.4 787 36.0
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 9.9e-108 395.2 720 40.6
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 9.9e-108 395.2 778 37.8
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 6.4e-107 392.5 546 44.7
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.9e-106 391.0 729 40.9
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 9.3e-106 388.7 761 38.4
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.1e-105 387.5 736 40.1
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 4.6e-105 386.3 823 35.6
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 6.0e-105 386.0 721 40.2
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 6.0e-105 386.0 782 36.8
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 1.3e-104 384.8 730 38.9
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 2.3e-104 384.0 531 46.0
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.1e-103 381.7 796 36.8
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 4.3e-103 379.8 715 39.2
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 1.6e-102 377.9 764 37.8
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.9e-95 354.4 404 52.0
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 4.3e-95 353.2 500 43.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 7.6e-92 342.4 562 42.2
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 7.6e-92 342.4 477 46.5
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.7e-91 341.3 477 44.9
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 5.1e-88 329.7 425 48.7
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 8.2e-86 322.4 541 39.0
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 8.5e-75 285.8 444 43.9
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 1.9e-74 284.6 562 37.4
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 9.4e-74 282.3 773 32.6
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 5.7e-71 273.1 748 32.8
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.8e-69 268.1 534 37.6
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.7e-67 261.5 726 33.1
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.4e-64 251.9 389 42.2
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 2.2e-62 244.6 264 56.4
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.0e-59 235.7 757 30.0
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 1.2e-49 202.2 498 30.7
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 1.8e-48 198.4 326 43.3
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 3.0e-48 197.6 603 30.8
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 5.9e-44 183.3 574 30.1
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 2.1e-41 174.9 548 27.9
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 3.1e-37 161.0 473 31.5
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 3.8e-35 154.1 181 51.9
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 2.4e-29 134.8 696 29.6
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 9.8e-23 112.8 201 44.8
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.2e-20 105.9 147 44.2
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.1e-18 99.4 123 46.3
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 6.4e-14 83.6 126 42.1
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.9e-13 82.0 137 37.2
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.0e-11 74.7 77 61.0
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 1.1e-10 72.8 87 46.0
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 5.6e-10 70.5 87 47.1
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.2e-09 69.3 76 48.7
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 3.6e-09 67.8 87 44.8
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 3.1e-08 64.7 71 50.7
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.9e-06 58.2 97 41.2


User provided reference genes

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