Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 7.9e-169 597.0 306 100.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.3e-118 430.3 314 72.9
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.2e-117 425.6 314 72.6
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.2e-103 380.6 272 73.2
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.9e-82 310.1 308 57.1
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 3.6e-81 305.8 310 56.1
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 2.7e-76 289.7 307 56.4
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.0e-75 287.7 299 56.2
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 8.1e-73 278.1 316 55.4
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 8.1e-73 278.1 308 57.5
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.3e-70 270.8 305 54.1
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.1e-69 267.7 305 55.1
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 2.5e-69 266.5 294 50.3
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 5.5e-69 265.4 298 51.0
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 1.6e-68 263.8 298 50.7
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 2.5e-66 256.5 303 53.5
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.8e-65 253.1 297 49.2
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.1e-64 249.6 307 49.8
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.0e-62 244.6 312 49.0
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.0e-62 244.6 294 50.0
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 1.7e-62 243.8 250 54.4
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 6.5e-62 241.9 294 50.0
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 8.4e-62 241.5 306 47.7
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.4e-61 240.7 302 48.3
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.4e-61 240.7 297 49.5
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 2.1e-60 236.9 298 49.7
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 2.1e-60 236.9 281 48.4
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 3.3e-58 229.6 246 52.4
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 2.8e-57 226.5 251 53.8
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 8.2e-57 224.9 245 50.6
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 8.2e-57 224.9 244 52.9
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 8.2e-57 224.9 312 45.2
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.4e-56 224.2 322 43.8
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 2.4e-56 223.4 249 50.6
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 5.3e-56 222.2 275 49.8
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 5.3e-56 222.2 302 44.0
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 6.9e-56 221.9 297 45.5
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 9.0e-56 221.5 286 46.2
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 5.9e-55 218.8 280 46.8
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 7.7e-55 218.4 294 49.3
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 2.9e-54 216.5 282 44.0
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 3.8e-54 216.1 276 49.3
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 1.1e-53 214.5 306 46.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 1.4e-53 214.2 299 44.8
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.9e-53 213.8 300 44.3
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.9e-53 213.8 306 45.1
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.2e-53 213.0 290 46.9
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.1e-52 210.3 301 45.5
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.1e-52 210.3 288 47.2
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 7.9e-52 208.4 301 44.2
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 7.9e-52 208.4 302 41.4
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.0e-51 208.0 318 44.3
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 5.1e-51 205.7 302 45.4
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.1e-50 204.5 287 46.0
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.1e-50 204.5 260 47.7
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 1.5e-50 204.1 255 51.4
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.0e-50 203.8 302 45.4
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.0e-50 203.8 242 50.0
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 2.5e-50 203.4 328 43.9
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.5e-50 203.4 300 44.7
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 3.1e-48 196.4 324 41.0
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 5.3e-48 195.7 298 43.0
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 6.9e-48 195.3 295 43.4
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.0e-47 193.7 281 44.1
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.7e-46 190.7 317 42.3
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.2e-46 190.3 259 49.0
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 6.5e-46 188.7 321 41.1
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 5.5e-45 185.7 317 42.0
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 9.4e-45 184.9 316 41.8
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 7.9e-44 181.8 301 41.2
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 3.1e-40 169.9 185 51.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 7.2e-37 158.7 222 46.4
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.1e-36 157.1 229 42.8
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 5.2e-35 152.5 195 44.1
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 8.8e-35 151.8 236 41.5
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.8e-33 146.7 236 41.1
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 2.4e-32 143.7 303 36.3
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.6e-31 141.0 236 41.5
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.5e-26 124.4 161 44.1
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.8e-25 120.2 179 40.8
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 1.8e-24 117.5 134 50.0
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 7.7e-23 112.1 146 47.9
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.7e-22 110.9 153 47.1
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 7.7e-15 85.5 209 28.2
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.5e-13 81.3 237 36.3
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 2.5e-13 80.5 96 38.5
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 5.5e-13 79.3 109 39.4
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.2e-12 78.2 225 31.6
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 2.8e-12 77.0 103 46.6
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 6.1e-12 75.9 116 42.2
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.0e-11 75.1 191 31.9
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 5.7e-10 69.3 192 27.6
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 5.7e-10 69.3 258 28.3
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.9e-09 67.0 45 64.4
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.8e-08 64.3 118 36.4
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 2.0e-07 60.8 211 26.1
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 1.0e-06 58.5 89 34.8


User provided reference genes

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