Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 0.0e+00 1433.7 840 100.0
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 5.9e-299 1030.8 834 78.4
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 1.8e-295 1019.2 844 73.0
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 5.9e-291 1004.2 844 75.8
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 2.8e-285 985.3 817 76.1
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 2.3e-146 523.9 856 46.1
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 4.7e-139 499.6 864 45.0
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 3.1e-138 496.9 834 49.0
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 4.9e-136 489.6 850 44.0
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 7.1e-135 485.7 853 48.8
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 5.1e-133 479.6 851 42.8
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 3.4e-129 466.8 850 46.9
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 2.2e-128 464.2 852 41.9
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 7.1e-127 459.1 842 42.8
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.0e-125 455.3 855 42.1
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 3.9e-125 453.4 842 41.8
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 6.6e-125 452.6 846 43.3
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 1.6e-123 448.0 853 43.7
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.8e-123 447.2 846 41.7
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 8.1e-123 445.7 853 43.5
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 2.4e-122 444.1 840 48.5
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.6e-121 440.7 841 42.4
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.4e-121 439.9 845 41.8
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 9.9e-121 438.7 848 40.6
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 9.9e-121 438.7 845 41.2
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 1.3e-120 438.3 845 46.2
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.3e-120 438.3 845 41.2
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 8.4e-120 435.6 846 40.8
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 8.4e-120 435.6 870 44.9
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 1.4e-119 434.9 846 40.2
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 4.2e-119 433.3 846 47.0
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 3.5e-118 430.3 842 46.0
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.3e-117 427.6 853 42.7
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 5.1e-117 426.4 912 36.8
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 4.3e-116 423.3 850 46.6
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.1e-115 421.0 842 44.7
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.8e-115 419.9 841 40.7
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 6.2e-115 419.5 846 41.1
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.1e-114 418.7 865 39.9
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 1.4e-114 418.3 851 44.7
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 3.1e-114 417.2 864 39.7
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 5.3e-114 416.4 856 45.6
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 9.0e-114 415.6 824 45.9
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 2.0e-113 414.5 854 41.1
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 4.5e-113 413.3 859 44.8
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 3.8e-112 410.2 860 41.9
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 1.1e-111 408.7 847 41.8
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 2.4e-111 407.5 845 44.1
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 4.2e-111 406.8 682 46.9
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 4.6e-110 403.3 841 45.4
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.9e-110 402.5 843 43.5
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.9e-109 400.2 841 42.6
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 5.1e-109 399.8 838 45.9
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 1.9e-108 397.9 849 38.5
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 1.9e-108 397.9 853 40.0
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 9.6e-108 395.6 853 41.1
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 1.4e-106 391.7 804 38.6
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.5e-105 388.3 709 46.0
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.5e-105 388.3 869 39.2
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 5.5e-103 379.8 865 45.2
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 9.3e-103 379.0 423 61.9
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 7.9e-102 375.9 861 37.6
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.0e-101 374.0 803 38.7
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 3.9e-101 373.6 849 37.8
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 8.7e-101 372.5 855 43.0
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 1.1e-100 372.1 849 37.3
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.9e-100 371.3 490 51.6
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.9e-100 371.3 850 37.5
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 4.3e-100 370.2 873 38.0
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 5.6e-100 369.8 848 43.3
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 1.3e-99 368.6 868 39.1
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 6.9e-98 362.8 856 41.5
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 5.8e-97 359.8 874 38.1
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 1.9e-95 354.8 842 38.6
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 2.5e-95 354.4 831 44.2
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 2.1e-94 351.3 849 38.3
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 4.6e-94 350.1 845 37.6
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 1.0e-93 349.0 851 38.5
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 1.1e-92 345.5 861 43.2
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 4.3e-92 343.6 825 42.5
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 1.6e-91 341.7 849 39.6
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 8.2e-91 339.3 1032 34.0
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 1.1e-90 339.0 841 35.9
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.4e-90 338.6 839 44.6
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 7.6e-89 332.8 850 43.3
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 1.4e-87 328.6 838 37.6
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 1.9e-87 328.2 853 38.6
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 2.5e-87 327.8 519 49.9
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 3.2e-87 327.4 869 37.6
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 4.2e-87 327.0 840 41.7
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 2.1e-86 324.7 837 40.5
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 6.1e-86 323.2 870 37.4
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 8.7e-85 319.3 369 52.6
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 9.7e-84 315.8 855 41.2
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 1.3e-83 315.5 842 39.0
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 2.8e-83 314.3 843 36.2
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.1e-82 312.4 860 40.2
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 1.8e-82 311.6 566 51.1
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 1.5e-81 308.5 838 36.5
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 2.0e-81 308.1 837 40.4
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 5.9e-81 306.6 822 40.8
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 2.2e-80 304.7 844 37.6
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 5.0e-80 303.5 837 38.9
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 2.5e-79 301.2 382 56.5
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 2.1e-78 298.1 883 34.0
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 2.3e-77 294.7 836 38.3
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 3.0e-77 294.3 678 43.2
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 8.8e-77 292.7 527 53.7
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 1.1e-76 292.4 842 39.5
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 1.5e-76 292.0 691 42.1
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 2.0e-76 291.6 688 43.3
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 2.0e-76 291.6 582 50.3
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 4.4e-76 290.4 843 40.5
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 1.3e-75 288.9 553 47.0
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 6.3e-75 286.6 524 51.3
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 1.1e-74 285.8 758 35.4
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 1.4e-74 285.4 710 41.4
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 1.4e-74 285.4 690 39.4
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 1.0e-72 279.3 861 36.9
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 2.2e-72 278.1 559 38.5
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.1e-71 275.8 652 45.1
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 2.0e-68 265.0 786 37.3
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 2.6e-68 264.6 828 34.2
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 3.7e-67 260.8 599 44.7
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 6.3e-67 260.0 836 37.2
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 5.0e-64 250.4 876 37.6
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 5.0e-64 250.4 855 35.7
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 1.5e-63 248.8 524 45.2
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 2.7e-62 244.6 519 45.7
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 1.0e-61 242.7 300 52.0
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 4.4e-60 237.3 623 40.0
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 5.7e-60 236.9 626 40.3
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 3.4e-52 211.1 856 30.7
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 3.1e-50 204.5 606 35.6
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.0e-40 172.9 612 33.5
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 3.8e-40 171.0 347 52.2
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 5.6e-39 167.2 165 63.0
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 1.2e-36 159.5 492 31.9
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 3.7e-35 154.5 705 29.8
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 1.4e-34 152.5 114 72.8
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 5.9e-33 147.1 389 48.3
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 3.3e-31 141.4 447 30.6
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 1.2e-30 139.4 99 73.7
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 5.8e-28 130.6 135 57.8
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.9e-27 128.3 422 29.1
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 7.8e-25 120.2 363 38.0
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.0e-24 118.2 173 51.4
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 6.6e-24 117.1 93 72.0
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 1.6e-22 112.5 563 29.5
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.3e-21 108.6 420 27.6
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 9.9e-20 103.2 68 82.4
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 1.3e-19 102.8 555 25.4
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 1.3e-19 102.8 718 26.9
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.4e-18 97.4 66 78.8
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 2.3e-16 92.0 84 61.9
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 3.3e-15 88.2 80 58.8
Oeu023150.1 Olea europaea HOM05D003628 ORTHO05D004253 3.1e-13 81.6 56 75.0
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 5.2e-13 80.9 446 24.9
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.9e-11 74.3 48 79.2
PGSC0003DMG402011586 Solanum tuberosum HOM05D003628 ORTHO05D004253 6.4e-11 73.9 63 66.7
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.4e-10 72.8 48 77.1
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 3.0e-08 65.1 48 66.7
CDE04G1765 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 5.1e-08 64.3 255 31.8
Gohir.D04G051401 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-07 63.2 62 64.5
HPP92_026453 Vanilla planifolia HOM05D003628 ORTHO05D004253 4.3e-07 61.2 79 46.8
Gohir.A02G090400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.6e-07 60.8 62 61.3
Gohir.D01G060866 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.6e-07 60.8 37 81.1
Gorai.004G113400 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.6e-07 60.8 62 61.3
Ah.14g082010 Amaranthus hybridus HOM05D003628 ORTHO05D004253 9.6e-07 60.1 37 81.1
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-06 59.7 37 78.4
Gohir.D12G066350 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-06 59.7 62 61.3
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.2e-06 59.7 38 78.9
Gohir.A11G239380 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.6e-06 59.3 37 78.4
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 3.6e-06 58.2 37 75.7
Gohir.D08G175500 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.7e-06 57.8 37 75.7
Gorai.009G342200 Gossypium raimondii HOM05D003628 ORTHO05D016264 6.2e-06 57.4 35 80.0


User provided reference genes

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