Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002303 Sechium edule HOM05D000913 ORTHO05D000687 1.1e-52 209.9 120 100.0
MELO3C013462.2 Cucumis melo HOM05D000913 ORTHO05D000687 3.6e-32 141.7 119 69.7
CsaV3_6G009780 Cucumis sativus L. HOM05D000913 ORTHO05D000687 1.0e-31 140.2 119 63.0
ClCG02G010880 Citrullus lanatus HOM05D000913 ORTHO05D000687 1.4e-31 139.8 118 69.5
Gohir.A11G147300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.4e-14 81.6 112 53.6
Gohir.D11G154000 Gossypium hirsutum HOM05D000913 ORTHO05D000687 4.4e-14 81.6 112 49.1
Gorai.007G164100 Gossypium raimondii HOM05D000913 ORTHO05D000687 4.4e-14 81.6 112 49.1
Manes.12G067600 Manihot esculenta HOM05D000913 ORTHO05D000687 9.8e-14 80.5 78 60.3
DCAR_021079 Daucus carota HOM05D000913 ORTHO05D000687 1.3e-13 80.1 118 39.8
Manes.13G059500 Manihot esculenta HOM05D000913 ORTHO05D000687 1.3e-13 80.1 111 46.8
Gohir.A11G147350 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.4e-12 76.6 118 44.9
Thecc.01G201000 Theobroma cacao HOM05D000913 ORTHO05D000687 1.4e-12 76.6 76 60.5
Gorai.007G164300 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.8e-12 76.3 116 47.4
Gohir.D11G154200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 2.4e-12 75.9 116 46.6
Sabra01G0038000 Salix brachista HOM05D000913 ORTHO05D000687 9.1e-12 73.9 79 55.7
Actinidia12348 Actinidia chinensis HOM05D000913 ORTHO05D000687 1.2e-11 73.6 78 57.7
DCAR_019659 Daucus carota HOM05D000913 ORTHO05D000687 2.0e-11 72.8 79 49.4
Actinidia12346 Actinidia chinensis HOM05D000913 ORTHO05D000687 2.7e-11 72.4 78 57.7
Sabra14G0130500 Salix brachista HOM05D000913 ORTHO05D000687 2.7e-11 72.4 120 43.3
Cpa.g.sc136.67 Carica papaya HOM05D000913 ORTHO05D000687 3.5e-11 72.0 79 54.4
Potri.009G048100 Populus trichocarpa HOM05D000913 ORTHO05D000687 3.5e-11 72.0 79 55.7
Duzib138G1058 Durio zibethinus HOM05D000913 ORTHO05D000687 4.5e-11 71.6 79 57.0
Potri.014G171300 Populus trichocarpa HOM05D000913 ORTHO05D000687 4.5e-11 71.6 120 43.3
Potri.009G048400 Populus trichocarpa HOM05D000913 ORTHO05D000687 5.9e-11 71.2 114 45.6
Gohir.D07G169300 Gossypium hirsutum HOM05D000913 ORTHO05D000687 7.7e-11 70.9 79 57.0
Gorai.001G189300 Gossypium raimondii HOM05D000913 ORTHO05D000687 7.7e-11 70.9 79 57.0
Duzib138G1006 Durio zibethinus HOM05D000913 ORTHO05D000687 1.0e-10 70.5 119 42.9
QL04p074221 Quercus lobata HOM05D000913 ORTHO05D000687 1.0e-10 70.5 121 41.3
QL12p009157 Quercus lobata HOM05D000913 ORTHO05D000687 1.0e-10 70.5 122 41.8
COL.COLO4_19668 Corchorus olitorius HOM05D000913 ORTHO05D000687 1.7e-10 69.7 74 60.8
Duzib138G0027 Durio zibethinus HOM05D000913 ORTHO05D000687 1.7e-10 69.7 79 55.7
Manes.13G059333 Manihot esculenta HOM05D000913 ORTHO05D000687 1.7e-10 69.7 73 60.3
Potri.009G048300 Populus trichocarpa HOM05D000913 ORTHO05D000687 2.3e-10 69.3 79 53.2
Migut.M00555 Erythranthe guttata HOM05D000913 ORTHO05D000687 2.9e-10 68.9 111 41.4
Migut.M00556 Erythranthe guttata HOM05D000913 ORTHO05D000687 2.9e-10 68.9 111 41.4
QL04p074171 Quercus lobata HOM05D000913 ORTHO05D000687 2.9e-10 68.9 109 41.3
QL04p074188 Quercus lobata HOM05D000913 ORTHO05D000687 2.9e-10 68.9 109 42.2
Atru.chr1.4053 Acer truncatum HOM05D000913 ORTHO05D000687 3.8e-10 68.6 76 55.3
Duzib133G0202 Durio zibethinus HOM05D000913 ORTHO05D000687 3.8e-10 68.6 111 45.0
Duzib138G1373 Durio zibethinus HOM05D000913 ORTHO05D000687 3.8e-10 68.6 113 42.5
Duzib138G1828 Durio zibethinus HOM05D000913 ORTHO05D000687 3.8e-10 68.6 113 42.5
QL12p009146 Quercus lobata HOM05D000913 ORTHO05D000687 3.8e-10 68.6 120 40.8
Ciclev10017259m.g Citrus clementina HOM05D000913 ORTHO05D000687 5.0e-10 68.2 77 54.5
Gohir.A07G162700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 5.0e-10 68.2 79 55.7
TPR.G27426 Trifolium pratense HOM05D000913 ORTHO05D000687 5.0e-10 68.2 110 47.3
Atru.chr1.4051 Acer truncatum HOM05D000913 ORTHO05D000687 6.6e-10 67.8 115 52.2
COL.COLO4_19669 Corchorus olitorius HOM05D000913 ORTHO05D000687 6.6e-10 67.8 75 53.3
QL04p074182 Quercus lobata HOM05D000913 ORTHO05D000687 6.6e-10 67.8 122 41.8
vmacro12050 Vaccinium macrocarpon HOM05D000913 ORTHO05D000687 6.6e-10 67.8 79 51.9
Ciclev10017001m.g Citrus clementina HOM05D000913 ORTHO05D000687 8.6e-10 67.4 82 53.7
DCAR_019657 Daucus carota HOM05D000913 ORTHO05D000687 8.6e-10 67.4 79 48.1
Potri.014G171500 Populus trichocarpa HOM05D000913 ORTHO05D000687 8.6e-10 67.4 120 41.7
DCAR_019660 Daucus carota HOM05D000913 ORTHO05D000687 1.1e-09 67.0 78 50.0
Eucgr.K01377 Eucalyptus grandis HOM05D000913 ORTHO05D000687 1.9e-09 66.2 126 38.1
QL04p074203 Quercus lobata HOM05D000913 ORTHO05D000687 1.9e-09 66.2 122 39.3
Migut.M00531 Erythranthe guttata HOM05D000913 ORTHO05D000687 2.5e-09 65.9 111 40.5
GSVIVG01030137001 Vitis vinifera HOM05D000913 ORTHO05D000687 2.5e-09 65.9 79 48.1
Migut.E01774 Erythranthe guttata HOM05D000913 ORTHO05D000687 3.3e-09 65.5 79 50.6
QL04p074166 Quercus lobata HOM05D000913 ORTHO05D000687 3.3e-09 65.5 120 40.0
TPR.G10635 Trifolium pratense HOM05D000913 ORTHO05D000687 3.3e-09 65.5 76 47.4
ECA236G4318 Erigeron canadensis HOM05D000913 ORTHO05D000687 4.2e-09 65.1 119 38.7
Glyma.07G098500 Glycine max HOM05D000913 ORTHO05D000687 4.2e-09 65.1 76 50.0
Prupe.6G030300 Prunus persica HOM05D000913 ORTHO05D000687 4.2e-09 65.1 79 53.2
QL04p074133 Quercus lobata HOM05D000913 ORTHO05D000687 5.5e-09 64.7 121 39.7
DCAR_021080 Daucus carota HOM05D000913 ORTHO05D000687 7.2e-09 64.3 79 48.1
QL04p074116 Quercus lobata HOM05D000913 ORTHO05D000687 7.2e-09 64.3 80 48.8
Glyma.09G179800 Glycine max HOM05D000913 ORTHO05D000687 1.2e-08 63.5 76 50.0
MBI15_g37255_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.2e-08 63.5 77 51.9
MD11G1039200 Malus domestica HOM05D000913 ORTHO05D000687 1.2e-08 63.5 78 50.0
Solyc07g056200.3 Solanum lycopersicum HOM05D000913 ORTHO05D000687 1.2e-08 63.5 73 52.1
Aqoxy4G01749 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 1.6e-08 63.2 111 37.8
Atru.chr6.3444 Acer truncatum HOM05D000913 ORTHO05D000687 2.1e-08 62.8 79 45.6
DCAR_008755 Daucus carota HOM05D000913 ORTHO05D000687 2.1e-08 62.8 64 53.1
Lsat_1_v5_gn_7_98760 Lactuca sativa HOM05D000913 ORTHO05D000687 2.8e-08 62.4 78 50.0
DCAR_008754 Daucus carota HOM05D000913 ORTHO05D000687 3.6e-08 62.0 111 51.4
Lsat_1_v5_gn_3_91360 Lactuca sativa HOM05D000913 ORTHO05D000687 3.6e-08 62.0 78 52.6
Lsat_1_v5_gn_7_98720 Lactuca sativa HOM05D000913 ORTHO05D000687 3.6e-08 62.0 78 52.6
SalBow8G2786 Salvia bowleyana HOM05D000913 ORTHO05D000687 3.6e-08 62.0 117 40.2
Sopen07g029550 Solanum pennellii HOM05D000913 ORTHO05D000687 3.6e-08 62.0 120 40.0
CiPaw.10G022900 Carya illinoinensis HOM05D000913 ORTHO05D000687 4.7e-08 61.6 123 40.7
Lsat_1_v5_gn_7_98101 Lactuca sativa HOM05D000913 ORTHO05D000687 4.7e-08 61.6 78 52.6
Medtr3g082250 Medicago truncatula HOM05D000913 ORTHO05D000687 4.7e-08 61.6 111 42.3
Psat5g105760 Pisum sativum HOM05D000913 ORTHO05D000687 4.7e-08 61.6 77 46.8
CiPaw.10G022600 Carya illinoinensis HOM05D000913 ORTHO05D000687 6.1e-08 61.2 86 47.7
DCAR_015686 Daucus carota HOM05D000913 ORTHO05D000687 6.1e-08 61.2 117 37.6
Eucgr.K01375 Eucalyptus grandis HOM05D000913 ORTHO05D000687 6.1e-08 61.2 89 43.8
HanXRQChr11g0329551 Helianthus annuus HOM05D000913 ORTHO05D000687 6.1e-08 61.2 77 49.4
Lsat_1_v5_gn_7_98820 Lactuca sativa HOM05D000913 ORTHO05D000687 6.1e-08 61.2 114 38.6
TWI36G1369 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 6.1e-08 61.2 97 41.2
TAR626G0368 Trochodendron aralioides HOM05D000913 ORTHO05D000687 6.1e-08 61.2 78 50.0
CiPaw.03G195900 Carya illinoinensis HOM05D000913 ORTHO05D000687 8.0e-08 60.8 121 40.5
HanXRQChr01g0023431 Helianthus annuus HOM05D000913 ORTHO05D000687 8.0e-08 60.8 113 41.6
MBI14_g37420_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 8.0e-08 60.8 119 44.5
Nitab4.5_0002251g0110 Nicotiana tabacum HOM05D000913 ORTHO05D000687 8.0e-08 60.8 73 47.9
Duzib211G0303 Durio zibethinus HOM05D000913 ORTHO05D000687 1.0e-07 60.5 116 43.1
MBI14_g16762_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.0e-07 60.5 119 39.5
Phvul.008G282300 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 1.0e-07 60.5 79 49.4
QL04p074148 Quercus lobata HOM05D000913 ORTHO05D000687 1.0e-07 60.5 118 38.1
RcHm_v2.0_Chr5g0075321 Rosa chinensis HOM05D000913 ORTHO05D000687 1.0e-07 60.5 76 47.4
SalBow6G0242 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.0e-07 60.5 79 50.6
Solyc07g056190.3 Solanum lycopersicum HOM05D000913 ORTHO05D000687 1.4e-07 60.1 73 50.7
TAR626G1783 Trochodendron aralioides HOM05D000913 ORTHO05D000687 1.4e-07 60.1 79 49.4
HanXRQChr01g0023451 Helianthus annuus HOM05D000913 ORTHO05D000687 1.8e-07 59.7 113 40.7
HanXRQChr04g0126321 Helianthus annuus HOM05D000913 ORTHO05D000687 1.8e-07 59.7 82 51.2
Lsat_1_v5_gn_7_98700 Lactuca sativa HOM05D000913 ORTHO05D000687 1.8e-07 59.7 78 50.0
Sopen07g029540 Solanum pennellii HOM05D000913 ORTHO05D000687 1.8e-07 59.7 73 50.7
Lsat_1_v5_gn_7_98660 Lactuca sativa HOM05D000913 ORTHO05D000687 2.3e-07 59.3 78 50.0
MBI14_g17948_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 2.3e-07 59.3 117 39.3
MD03G1038100 Malus domestica HOM05D000913 ORTHO05D000687 2.3e-07 59.3 77 49.4
Prupe.6G030200 Prunus persica HOM05D000913 ORTHO05D000687 2.3e-07 59.3 78 50.0
QL04p066294 Quercus lobata HOM05D000913 ORTHO05D000687 2.3e-07 59.3 88 45.5
TWI63G0143 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 2.3e-07 59.3 76 46.1
ECA236G3674 Erigeron canadensis HOM05D000913 ORTHO05D000687 3.0e-07 58.9 78 48.7
Glyma.15G122200 Glycine max HOM05D000913 ORTHO05D000687 3.0e-07 58.9 77 46.8
CARHR082300 Cardamine hirsuta HOM05D000913 ORTHO05D000687 4.0e-07 58.5 129 48.1
Cc02_g37590 Coffea canephora HOM05D000913 ORTHO05D000687 4.0e-07 58.5 117 35.0
Eucgr.A00963 Eucalyptus grandis HOM05D000913 ORTHO05D000687 4.0e-07 58.5 91 46.2
Eucgr.A00965 Eucalyptus grandis HOM05D000913 ORTHO05D000687 4.0e-07 58.5 91 46.2
PGSC0003DMG400017307 Solanum tuberosum HOM05D000913 ORTHO05D000687 4.0e-07 58.5 73 49.3
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 4.0e-07 58.5 76 48.7
Ca_27958_v3 Cicer arietinum L. HOM05D000913 ORTHO05D000687 5.2e-07 58.2 112 53.6
Cc05_g09760 Coffea canephora HOM05D000913 ORTHO05D000687 5.2e-07 58.2 79 45.6
ECA236G0352 Erigeron canadensis HOM05D000913 ORTHO05D000687 5.2e-07 58.2 121 38.8
Eucgr.A00960 Eucalyptus grandis HOM05D000913 ORTHO05D000687 5.2e-07 58.2 90 45.6
Nn1g07704 Nelumbo nucifera HOM05D000913 ORTHO05D000687 5.2e-07 58.2 72 50.0
QL04p066360 Quercus lobata HOM05D000913 ORTHO05D000687 5.2e-07 58.2 83 45.8
CSS0028038 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 6.8e-07 57.8 77 46.8
Eucgr.A00961 Eucalyptus grandis HOM05D000913 ORTHO05D000687 6.8e-07 57.8 91 45.1
LjContig00029g0010664 Lotus japonicus HOM05D000913 ORTHO05D000687 6.8e-07 57.8 75 46.7
Medtr6g082190 Medicago truncatula HOM05D000913 ORTHO05D000687 6.8e-07 57.8 62 53.2
PSO675G3882 Papaver somniferum HOM05D000913 ORTHO05D000687 6.8e-07 57.8 76 47.4
arahy.Tifrunner.gnm1.ann1.E2IRB4 Arachis hypogaea HOM05D000913 ORTHO05D000687 8.9e-07 57.4 77 44.2
THA.LOC104815685 Tarenaya hassleriana HOM05D011788 ORTHO05D000687 8.9e-07 57.4 74 41.9
Ah.12g065180 Amaranthus hybridus HOM05D000913 ORTHO05D000687 1.2e-06 57.0 78 50.0
CiPaw.10G023100 Carya illinoinensis HOM05D000913 ORTHO05D000687 1.2e-06 57.0 88 44.3
Cc05_g09770 Coffea canephora HOM05D000913 ORTHO05D000687 1.2e-06 57.0 79 44.3
FAN05G2837 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.2e-06 57.0 122 40.2
MBI14_g15410_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.2e-06 57.0 79 44.3
MBI14_g17949_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.2e-06 57.0 79 44.3
Nitab4.5_0006767g0020 Nicotiana tabacum HOM05D000913 ORTHO05D000687 1.2e-06 57.0 74 47.3
TWI36G1096 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 1.2e-06 57.0 95 41.1
arahy.Tifrunner.gnm1.ann1.U821IZ Arachis hypogaea HOM05D000913 ORTHO05D000687 1.5e-06 56.6 77 41.6
MSTRG.15032 Avicennia marina HOM05D000913 ORTHO05D000687 1.5e-06 56.6 79 50.6
Cfa014195 Carpinus fangiana HOM05D000913 ORTHO05D000687 1.5e-06 56.6 67 47.8
Dinv05338 Davidia involucrata HOM05D000913 ORTHO05D000687 1.5e-06 56.6 63 55.6
HanXRQChr03g0081521 Helianthus annuus HOM05D000041 ORTHO05D000452 1.5e-06 56.6 73 52.1
Medtr3g082260 Medicago truncatula HOM05D000913 ORTHO05D000687 1.5e-06 56.6 98 40.8
TPR.G33738 Trifolium pratense HOM05D000913 ORTHO05D000687 1.5e-06 56.6 80 40.0
TWI36G0980 Tripterygium wilfordii HOM05D000913 ORTHO05D000687 1.5e-06 56.6 91 42.9
arahy.Tifrunner.gnm1.ann1.K8UWAC Arachis hypogaea HOM05D000913 ORTHO05D000687 2.0e-06 56.2 63 46.0
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 2.0e-06 56.2 77 48.1
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 2.0e-06 56.2 77 49.4
Nitab4.5_0006767g0010 Nicotiana tabacum HOM05D000913 ORTHO05D000687 2.0e-06 56.2 73 45.2
Sc11g0006740 Simmondsia chinensis HOM05D000913 ORTHO05D000687 2.0e-06 56.2 78 48.7
COL.COLO4_09796 Corchorus olitorius HOM05D000913 ORTHO05D000687 2.6e-06 55.8 79 49.4
MBI15_g38739_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 2.6e-06 55.8 66 51.5
Medtr1g041690 Medicago truncatula HOM05D000913 ORTHO05D000687 2.6e-06 55.8 97 39.2
PSO017G1569 Papaver somniferum HOM05D000913 ORTHO05D000687 2.6e-06 55.8 77 46.8
PSO017G4708 Papaver somniferum HOM05D000913 ORTHO05D000687 2.6e-06 55.8 79 44.3
PSO573G0012 Papaver somniferum HOM05D000913 ORTHO05D000687 2.6e-06 55.8 79 44.3
GSVIVG01026843001 Vitis vinifera HOM05D000913 ORTHO05D000687 2.6e-06 55.8 79 44.3
BcaB03g14690 Brassica carinata HOM05D000913 ORTHO05D000687 3.4e-06 55.5 120 39.2
FAN09G0650 Fragaria x ananassa HOM05D000913 ORTHO05D000687 3.4e-06 55.5 117 39.3
LjContig00029g0025163 Lotus japonicus HOM05D000913 ORTHO05D000687 3.4e-06 55.5 74 50.0
Os02g0585100 Oryza sativa ssp. japonica HOM05D000913 ORTHO05D000687 3.4e-06 55.5 76 43.4
CANSAT56G3334 Cannabis sativa HOM05D000913 ORTHO05D000687 4.4e-06 55.1 77 46.8
Haze_12579 Corylus avellana HOM05D000913 ORTHO05D000687 4.4e-06 55.1 126 40.5
HanXRQChr04g0126331 Helianthus annuus HOM05D000913 ORTHO05D000687 4.4e-06 55.1 76 48.7
BcaB04g21280 Brassica carinata HOM05D000913 ORTHO05D000687 5.7e-06 54.7 77 44.2
CiPaw.03G195800 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.7e-06 54.7 61 52.5
QL05p004858 Quercus lobata HOM05D000913 ORTHO05D000687 5.7e-06 54.7 78 43.6
TPR.G31615 Trifolium pratense HOM05D000913 ORTHO05D000687 5.7e-06 54.7 73 46.6
Aqoxy5G03820 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 7.5e-06 54.3 79 46.8
Dinv03822 Davidia involucrata HOM05D000913 ORTHO05D000687 7.5e-06 54.3 77 46.8
Gorai.009G446400 Gossypium raimondii HOM05D000913 ORTHO05D000687 7.5e-06 54.3 78 48.7
Lsat_1_v5_gn_7_98640 Lactuca sativa HOM05D000913 ORTHO05D000687 7.5e-06 54.3 78 48.7
MBI14_g43020_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 7.5e-06 54.3 78 44.9
Peaxi162Scf00111g10031 Petunia axillaris HOM05D000913 ORTHO05D000687 7.5e-06 54.3 76 43.4
SalBow8G2374 Salvia bowleyana HOM05D000913 ORTHO05D000687 7.5e-06 54.3 78 44.9
Thecc.07G019800 Theobroma cacao HOM05D000913 ORTHO05D000687 7.5e-06 54.3 78 47.4
Gohir.D08G019400 Gossypium hirsutum HOM05D000913 ORTHO05D000687 9.8e-06 53.9 69 42.0
MBI14_g16764_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.8e-06 53.9 79 44.3
MBI14_g16765_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.8e-06 53.9 79 43.0
MBI14_g48110_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.8e-06 53.9 79 44.3
TPR.G10472 Trifolium pratense HOM05D000913 ORTHO05D000687 9.8e-06 53.9 77 44.2


User provided reference genes

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