Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002299 Sechium edule HOM05D005871 ORTHO05D003654 1.4e-86 323.2 201 100.0
Sed0004181 Sechium edule HOM05D005871 ORTHO05D003654 1.4e-41 173.7 225 58.7
CsaV3_1G015540 Cucumis sativus L. HOM05D005871 ORTHO05D003654 2.1e-21 106.7 224 48.2
MELO3C026071.2 Cucumis melo HOM05D005871 ORTHO05D003654 1.4e-20 104.0 234 44.0
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 1.8e-12 77.0 197 34.5
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 1.2e-11 74.3 205 31.2
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.5e-11 73.9 216 31.5
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 2.6e-11 73.2 189 34.4
arahy.Tifrunner.gnm1.ann1.5G685G Arachis hypogaea HOM05D005871 ORTHO05D003654 7.6e-11 71.6 185 33.0
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 3.8e-10 69.3 208 33.7
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 8.4e-10 68.2 202 33.2
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 1.4e-09 67.4 210 30.5
Glyma.09G012800 Glycine max HOM05D005871 ORTHO05D003654 4.2e-09 65.9 209 40.2
Potri.016G007400 Populus trichocarpa HOM05D005871 ORTHO05D003654 5.4e-09 65.5 197 39.1
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 9.3e-09 64.7 214 33.2
SalBow1G1270 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.2e-08 64.3 186 36.6
Thecc.06G238200 Theobroma cacao HOM05D005871 ORTHO05D003654 1.6e-08 63.9 222 39.6
CiPaw.09G107300 Carya illinoinensis HOM05D005871 ORTHO05D003654 2.7e-08 63.2 237 31.2
ClCG01G010940 Citrullus lanatus HOM05D005871 ORTHO05D003654 3.5e-08 62.8 34 97.1
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 6.0e-08 62.0 207 29.5
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 6.0e-08 62.0 216 32.4
Gorai.010G189400 Gossypium raimondii HOM05D005871 ORTHO05D003654 7.9e-08 61.6 223 32.7
Thhalv10021559m.g Eutrema salsugineum HOM05D010616 ORTHO05D003654 1.3e-07 60.8 203 28.1
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 1.8e-07 60.5 196 28.1
Phvul.003G085700 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.8e-07 60.5 174 35.1
Gohir.D06G162300 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.3e-07 60.1 184 35.3
Manes.09G078209 Manihot esculenta HOM05D005871 ORTHO05D003654 2.3e-07 60.1 211 37.9
Glyma.17G006900 Glycine max HOM05D005871 ORTHO05D003654 3.0e-07 59.7 196 32.7
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 6.7e-07 58.5 207 30.9
COL.COLO4_31921 Corchorus olitorius HOM05D005871 ORTHO05D003654 8.7e-07 58.2 209 36.8
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 1.1e-06 57.8 224 31.7
AT3G13130 Arabidopsis thaliana HOM05D010616 ORTHO05D003654 2.5e-06 56.6 203 29.1
BcaC05g29208 Brassica carinata HOM05D010616 ORTHO05D003654 2.5e-06 56.6 213 29.1
C05p54810 Brassica napus HOM05D010616 ORTHO05D003654 2.5e-06 56.6 213 29.1
BolC5t34153H Brassica oleracea HOM05D010616 ORTHO05D003654 2.5e-06 56.6 213 29.1
BraA05t22441Z Brassica rapa HOM05D010616 ORTHO05D003654 2.5e-06 56.6 204 28.4
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 2.5e-06 56.6 199 32.2
Gohir.A06G155900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.4e-06 55.1 223 28.7
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 7.4e-06 55.1 173 29.5
Ciclev10016570m.g Citrus clementina HOM05D005871 ORTHO05D003654 9.6e-06 54.7 232 29.3
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 9.6e-06 54.7 205 31.2
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 9.6e-06 54.7 174 29.3


User provided reference genes

Program Settings