Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 3.5e-107 391.7 213 100.0
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 5.0e-69 265.0 231 71.0
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 5.1e-66 255.0 233 69.5
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 4.1e-55 218.8 222 64.0
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 2.0e-41 173.3 242 48.8
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.3e-40 170.6 239 51.0
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 2.4e-39 166.4 226 52.2
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.1e-36 157.5 233 51.5
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.1e-36 157.5 172 59.9
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.5e-36 156.4 233 51.9
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.5e-36 155.2 248 46.8
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 2.7e-35 152.9 228 49.6
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 3.6e-35 152.5 248 46.0
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 3.6e-35 152.5 246 46.3
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 3.6e-35 152.5 234 49.1
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.0e-34 151.0 236 51.7
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 6.8e-34 148.3 238 49.6
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 8.8e-34 147.9 249 44.6
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.6e-33 146.4 244 48.4
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 4.4e-33 145.6 229 48.9
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 7.5e-33 144.8 228 48.7
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 1.3e-32 144.1 221 48.9
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 2.2e-32 143.3 227 47.1
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 2.8e-32 142.9 231 47.6
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 3.7e-32 142.5 231 46.8
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 1.1e-31 141.0 225 49.8
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 4.1e-31 139.0 235 46.0
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 5.4e-31 138.7 231 46.8
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.7e-30 136.3 204 47.1
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 2.3e-29 133.3 219 47.5
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 7.3e-28 128.3 217 46.1
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.6e-27 127.1 216 45.8
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 6.1e-27 125.2 243 43.2
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.4e-26 124.0 234 45.7
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 1.2e-25 120.9 251 44.6
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.2e-25 120.9 239 44.8
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 1.5e-25 120.6 226 42.9
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 3.4e-25 119.4 261 43.3
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 3.4e-25 119.4 218 48.6
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 5.7e-25 118.6 254 44.1
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 5.7e-25 118.6 217 49.8
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 9.8e-25 117.9 248 41.9
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 2.9e-24 116.3 237 44.3
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 1.8e-23 113.6 257 40.5
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 3.2e-23 112.8 220 40.9
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 4.1e-23 112.5 221 42.5
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 2.7e-22 109.8 215 44.2
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 4.6e-22 109.0 237 40.1
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 1.0e-21 107.8 196 40.8
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 1.7e-21 107.1 214 40.7
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 3.0e-21 106.3 236 39.0
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 5.0e-21 105.5 229 43.7
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 6.6e-21 105.1 164 51.2
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 6.6e-21 105.1 247 38.9
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.5e-20 104.0 218 42.2
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.5e-20 103.2 220 39.1
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 5.6e-20 102.1 217 44.7
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.6e-19 100.5 177 49.2
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 2.1e-19 100.1 230 44.8
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 1.0e-18 97.8 236 38.6
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 1.4e-18 97.4 220 39.1
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.4e-18 97.4 229 36.7
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 3.1e-18 96.3 230 37.8
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 4.0e-18 95.9 224 39.3
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 4.0e-18 95.9 250 37.6
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 1.5e-17 94.0 251 37.1
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 4.4e-17 92.4 244 35.2
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 9.8e-17 91.3 194 40.2
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 1.3e-16 90.9 162 45.7
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 1.7e-16 90.5 222 36.0
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 1.7e-16 90.5 223 35.9
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 1.7e-16 90.5 222 36.0
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 1.7e-16 90.5 222 36.0
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 2.2e-16 90.1 243 38.3
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 2.9e-16 89.7 223 36.8
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.1e-15 87.8 221 37.1
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 2.4e-15 86.7 244 36.9
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 7.0e-15 85.1 148 40.5
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 9.2e-15 84.7 240 35.8
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 8.6e-13 78.2 239 34.7
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 1.1e-12 77.8 237 34.6
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 9.5e-12 74.7 230 38.7
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 9.5e-12 74.7 228 33.3
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 8.1e-11 71.6 241 35.3
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 1.4e-10 70.9 151 43.7
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 3.1e-10 69.7 196 35.2
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 4.0e-10 69.3 196 35.7
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 3.4e-09 66.2 126 41.3
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 4.4e-09 65.9 131 41.2
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 7.5e-09 65.1 188 34.6
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 2.2e-08 63.5 89 46.1
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 3.7e-08 62.8 105 42.9
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 8.3e-08 61.6 213 31.0
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 7.1e-07 58.5 188 34.0


User provided reference genes

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