Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 1.4e-140 503.1 280 100.0
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 3.5e-123 445.3 286 89.2
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 3.5e-123 445.3 286 89.2
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 3.7e-112 408.7 286 81.8
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.8e-111 406.4 286 81.5
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 7.6e-110 401.0 285 81.1
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 2.2e-109 399.4 285 80.7
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 2.9e-109 399.1 237 81.9
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 6.4e-109 397.9 284 81.7
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 6.4e-109 397.9 285 80.0
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 1.1e-108 397.1 286 79.7
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 1.4e-108 396.7 286 79.7
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 3.2e-108 395.6 286 79.7
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 3.2e-108 395.6 286 79.7
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 4.2e-108 395.2 285 82.5
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 7.1e-108 394.4 285 78.9
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 9.3e-108 394.0 286 79.0
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.2e-107 393.7 285 79.3
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 1.2e-107 393.7 285 80.0
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 2.7e-107 392.5 285 80.4
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 4.6e-107 391.7 286 79.0
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 6.0e-107 391.3 288 79.2
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 7.9e-107 391.0 296 77.7
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 7.9e-107 391.0 240 80.0
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 3.0e-106 389.0 286 79.0
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 3.9e-106 388.7 285 78.6
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 1.1e-105 387.1 286 77.6
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.5e-105 386.7 286 79.7
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 1.5e-105 386.7 286 78.3
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 3.3e-105 385.6 286 79.7
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 4.3e-105 385.2 285 78.2
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.1e-103 380.6 285 77.2
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.4e-103 380.2 285 76.8
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.4e-103 380.2 285 76.5
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 2.4e-103 379.4 221 82.8
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 3.1e-103 379.0 306 74.5
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 3.1e-103 379.0 286 76.9
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 4.0e-103 378.6 285 76.8
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 9.0e-103 377.5 284 75.4
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.0e-102 376.3 285 75.8
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 3.4e-102 375.6 287 77.7
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 5.8e-102 374.8 286 77.6
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 7.6e-102 374.4 288 78.1
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 1.3e-101 373.6 285 77.2
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 2.2e-101 372.9 286 78.7
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.9e-101 372.5 289 77.5
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 3.8e-101 372.1 240 74.2
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.4e-100 370.2 286 76.2
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 2.5e-100 369.4 286 74.8
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.2e-100 369.0 285 76.8
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 4.2e-100 368.6 287 75.6
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.2e-99 367.1 283 75.6
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 8.7e-98 360.9 286 76.9
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 7.4e-97 357.8 286 74.1
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 1.3e-96 357.1 240 72.9
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 8.2e-96 354.4 240 75.0
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 8.2e-96 354.4 288 72.6
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.1e-95 354.0 231 74.9
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 3.1e-95 352.4 285 74.7
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 5.3e-95 351.7 285 73.7
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 9.0e-95 350.9 275 66.2
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.5e-94 350.1 286 74.1
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 2.6e-94 349.4 238 73.1
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 4.5e-94 348.6 286 73.8
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 4.5e-94 348.6 286 73.4
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 5.9e-94 348.2 286 73.8
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 5.9e-94 348.2 293 74.1
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 5.9e-94 348.2 267 76.0
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.0e-93 347.4 289 74.7
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 2.2e-93 346.3 293 73.7
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 3.8e-93 345.5 242 73.1
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 5.0e-93 345.1 284 73.6
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.1e-92 344.0 285 73.3
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 2.5e-92 342.8 289 74.0
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 5.5e-92 341.7 289 72.7
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 7.2e-92 341.3 286 72.0
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 7.2e-92 341.3 288 72.6
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 9.4e-92 340.9 279 74.9
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 9.4e-92 340.9 342 63.5
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 2.1e-91 339.7 288 72.2
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 4.6e-91 338.6 289 71.6
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 6.1e-91 338.2 210 80.5
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 2.0e-89 333.2 292 72.3
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 1.7e-88 330.1 286 68.5
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 3.7e-88 328.9 288 68.4
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 4.8e-88 328.6 243 68.3
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 2.4e-87 326.2 244 68.4
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 2.4e-87 326.2 244 68.9
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 5.3e-87 325.1 242 69.0
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 1.2e-86 323.9 241 68.5
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 2.0e-86 323.2 291 71.1
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 4.5e-86 322.0 210 75.2
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 4.5e-86 322.0 285 68.4
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.3e-85 320.5 287 67.6
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.3e-85 320.5 287 69.7
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 4.2e-84 315.5 234 66.2
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 9.4e-84 314.3 262 64.9
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 3.6e-83 312.4 243 67.1
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 3.6e-83 312.4 286 68.5
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 3.0e-82 309.3 218 70.6
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 3.9e-82 308.9 245 65.7
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 3.3e-81 305.8 283 70.3
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 2.2e-80 303.1 222 66.2
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 8.2e-80 301.2 285 68.1
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 1.2e-78 297.4 287 66.2
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 2.6e-78 296.2 239 63.2
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 5.9e-78 295.0 293 66.9
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.7e-77 293.5 243 75.3
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 5.0e-77 292.0 293 66.6
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 2.5e-76 289.7 234 64.5
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 3.2e-76 289.3 296 66.2
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 4.2e-76 288.9 294 66.3
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 2.7e-75 286.2 231 76.6
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 4.7e-75 285.4 294 66.0
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 6.1e-75 285.0 250 63.2
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 3.0e-74 282.7 246 63.0
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 7.4e-73 278.1 232 63.8
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 2.8e-72 276.2 247 62.3
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 8.2e-72 274.6 286 63.3
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.6e-70 270.4 228 74.6
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 3.5e-70 269.2 243 61.3
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 7.7e-70 268.1 198 70.2
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 3.2e-68 262.7 191 69.6
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 9.4e-68 261.2 211 64.9
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 2.7e-67 259.6 244 58.6
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 6.5e-61 238.4 232 57.3
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 6.5e-61 238.4 228 67.5
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.5e-60 236.5 228 58.8
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.8e-58 230.3 244 53.3
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 3.7e-56 222.6 200 58.5
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.1e-55 221.1 246 51.2
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 1.7e-40 170.6 242 56.2
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 2.3e-37 160.2 162 53.1
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 2.1e-35 153.7 131 61.8
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 2.4e-31 140.2 254 38.6
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.6e-30 137.5 238 39.9
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 6.0e-30 135.6 249 38.6
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 1.5e-28 131.0 243 37.0
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 4.3e-28 129.4 135 57.8
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 6.8e-26 122.1 222 39.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.0e-25 120.6 227 39.6
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 2.0e-25 120.6 225 36.9
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.4e-25 119.8 221 39.4
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 5.8e-25 119.0 223 37.2
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 1.3e-24 117.9 226 36.3
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.7e-24 117.5 232 34.9
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 3.7e-24 116.3 217 37.3
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.9e-23 114.0 221 36.7
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.4e-23 113.6 231 39.0
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 9.2e-23 111.7 53 96.2
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 2.1e-22 110.5 219 36.1
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 3.5e-22 109.8 232 36.2
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 6.0e-22 109.0 215 35.3
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 3.9e-21 106.3 222 34.7
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 5.1e-21 105.9 229 34.9
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 8.6e-21 105.1 220 34.5
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.5e-17 94.4 248 32.3
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 4.4e-17 92.8 262 31.3
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 2.2e-16 90.5 56 73.2
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 4.2e-15 86.3 45 84.4
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 4.6e-14 82.8 205 33.7
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 6.0e-14 82.4 201 35.3
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 1.0e-13 81.6 54 68.5
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 3.0e-13 80.1 245 29.8
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 5.1e-13 79.3 175 35.4
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 1.1e-12 78.2 190 34.7
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.1e-10 71.6 185 32.4
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 1.8e-10 70.9 174 34.5
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 9.0e-10 68.6 103 39.8
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 4.4e-09 66.2 246 26.4
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 4.9e-08 62.8 51 52.9
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 6.4e-08 62.4 39 59.0
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 1.9e-07 60.8 48 54.2
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 2.4e-07 60.5 30 76.7
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 7.1e-07 58.9 172 30.2
VMungo1383G0643 Vigna mungo HOM05D004124 ORTHO05D004779 9.3e-07 58.5 162 31.5


User provided reference genes

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