Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 2.7e-115 418.7 217 100.0
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 7.0e-103 377.5 226 87.6
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 3.5e-102 375.2 226 88.1
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 4.5e-102 374.8 226 87.6
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.5e-84 316.6 218 72.9
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.3e-84 315.5 215 74.0
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 3.3e-84 315.5 220 73.6
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 4.3e-84 315.1 218 71.6
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 1.2e-83 313.5 218 72.0
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 8.0e-83 310.8 224 70.5
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.8e-82 309.7 218 72.9
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 5.2e-82 308.1 221 73.8
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.2e-81 307.0 215 71.6
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 1.2e-81 307.0 213 75.1
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 4.4e-81 305.1 215 75.3
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 5.8e-81 304.7 194 77.8
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 7.5e-81 304.3 188 81.4
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 9.8e-81 303.9 215 70.7
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 1.3e-80 303.5 213 72.8
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-80 303.5 215 70.2
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 2.2e-80 302.8 221 69.7
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.2e-80 302.8 215 70.2
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.2e-80 302.8 204 74.0
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.9e-80 302.4 215 70.2
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.9e-80 302.4 204 73.0
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.9e-80 302.4 204 73.0
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 2.9e-80 302.4 193 77.7
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 6.4e-80 301.2 213 71.8
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 1.4e-79 300.1 182 81.3
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 4.1e-79 298.5 216 70.8
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 7.0e-79 297.7 216 69.9
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 9.2e-79 297.4 215 69.3
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 9.2e-79 297.4 211 71.1
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.2e-78 297.0 188 73.9
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 1.2e-78 297.0 183 78.7
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.2e-78 297.0 220 70.5
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 1.6e-78 296.6 215 73.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.6e-78 296.6 193 75.1
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 1.6e-78 296.6 216 70.8
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 1.6e-78 296.6 231 68.0
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 2.0e-78 296.2 215 70.2
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 3.5e-78 295.4 221 69.2
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 4.6e-78 295.0 188 75.5
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 4.6e-78 295.0 188 73.4
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 1.0e-77 293.9 218 67.4
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.0e-77 293.9 188 72.9
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 1.3e-77 293.5 223 67.3
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 1.7e-77 293.1 196 73.5
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 5.0e-77 291.6 205 70.7
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 5.0e-77 291.6 207 72.9
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 8.6e-77 290.8 228 65.4
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 2.5e-76 289.3 212 71.7
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 5.6e-76 288.1 212 67.9
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 9.5e-76 287.3 185 76.2
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 4.7e-75 285.0 215 67.4
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.8e-74 283.1 220 68.2
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 6.8e-74 281.2 218 67.9
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.5e-73 280.0 206 68.0
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 5.8e-73 278.1 216 67.1
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 5.8e-73 278.1 171 79.5
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 7.5e-73 277.7 215 66.5
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 7.5e-73 277.7 216 67.6
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.7e-72 276.6 216 64.8
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 2.9e-72 275.8 216 63.9
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 1.2e-70 270.4 212 63.7
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 1.6e-70 270.0 204 66.7
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 3.5e-70 268.9 177 73.4
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 6.0e-70 268.1 187 67.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 7.8e-70 267.7 212 62.7
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 7.8e-70 267.7 208 65.4
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 7.8e-70 267.7 205 67.3
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 2.3e-69 266.2 213 64.3
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 5.1e-69 265.0 226 61.1
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 6.6e-69 264.6 193 68.4
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 1.5e-68 263.5 217 63.6
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 4.3e-68 261.9 185 67.6
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 4.3e-68 261.9 219 62.1
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.2e-67 260.4 179 73.7
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 4.7e-67 258.5 177 70.1
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 8.1e-67 257.7 207 63.8
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.4e-66 256.9 180 70.6
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.3e-66 256.1 179 72.6
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 9.9e-65 250.8 176 71.6
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 4.9e-64 248.4 199 62.8
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 4.9e-64 248.4 190 68.4
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 8.4e-64 247.7 176 67.6
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 8.4e-64 247.7 159 74.8
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 8.4e-64 247.7 176 67.6
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.4e-63 246.1 170 68.2
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.2e-63 245.7 204 59.3
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 2.1e-62 243.0 176 65.3
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 3.5e-62 242.3 176 65.3
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 6.0e-62 241.5 169 67.5
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 6.0e-62 241.5 168 67.9
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 6.0e-62 241.5 168 67.9
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 6.0e-62 241.5 168 67.9
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 3.0e-61 239.2 172 65.7
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 3.0e-61 239.2 172 65.7
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 5.1e-61 238.4 156 76.9
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 6.6e-61 238.0 167 68.3
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 8.6e-61 237.7 228 56.6
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 8.6e-61 237.7 228 56.6
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 2.5e-60 236.1 171 65.5
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 4.3e-60 235.3 211 58.8
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 4.3e-60 235.3 211 58.8
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 9.6e-60 234.2 189 64.0
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 9.6e-60 234.2 211 57.8
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.6e-59 233.4 181 65.2
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.8e-59 232.6 156 72.4
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 8.9e-58 227.6 157 73.2
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 1.2e-57 227.3 156 73.1
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 5.8e-57 224.9 156 73.1
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 2.2e-56 223.0 156 69.9
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 3.8e-56 222.2 189 57.7
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 3.8e-56 222.2 155 68.4
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 6.4e-56 221.5 156 73.1
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 2.7e-54 216.1 156 71.2
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 4.6e-54 215.3 156 66.0
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 6.0e-54 214.9 156 69.9
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.3e-53 213.8 159 64.2
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 1.5e-52 210.3 167 63.5
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 3.3e-52 209.1 155 70.3
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 5.6e-52 208.4 147 70.7
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 9.6e-52 207.6 174 60.3
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 3.6e-51 205.7 171 60.8
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.4e-50 203.8 136 74.3
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 1.4e-50 203.8 150 66.7
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.5e-49 200.3 188 53.2
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 6.4e-48 194.9 198 56.6
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 6.4e-48 194.9 198 56.6
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 8.4e-48 194.5 200 51.0
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.4e-47 193.7 143 72.0
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 3.2e-47 192.6 138 66.7
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 7.1e-47 191.4 125 77.6
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.1e-46 189.9 117 79.5
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.5e-44 183.7 182 51.6
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 5.6e-44 181.8 208 48.1
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.4e-41 172.6 106 82.1
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 9.9e-41 171.0 106 81.1
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 8.4e-40 167.9 136 61.0
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.3e-37 160.6 175 50.3
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 1.3e-37 160.6 212 45.3
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 9.6e-36 154.5 207 44.9
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 2.8e-35 152.9 108 71.3
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 5.3e-34 148.7 157 46.5
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 1.5e-25 120.6 87 65.5
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 1.9e-23 113.6 156 44.9
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.5e-20 103.2 204 31.9
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.2e-16 90.1 79 60.8
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.2e-16 90.1 79 60.8
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.5e-15 86.7 76 56.6


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