Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.4e-57 226.1 113 100.0
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 4.2e-43 177.9 117 76.1
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 6.1e-42 174.1 117 73.5
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 4.0e-41 171.4 110 76.4
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 2.4e-30 135.6 103 67.0
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 7.0e-30 134.0 90 70.0
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 3.5e-29 131.7 87 70.1
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 4.5e-29 131.3 92 66.3
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 5.9e-29 131.0 110 59.1
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 7.8e-29 130.6 95 65.3
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 7.8e-29 130.6 92 66.3
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.3e-28 129.8 104 59.6
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 2.3e-28 129.0 101 63.4
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.3e-28 129.0 99 62.6
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.9e-28 128.6 90 65.6
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 5.0e-28 127.9 101 63.4
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 5.0e-28 127.9 96 63.5
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 8.6e-28 127.1 110 59.1
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.1e-27 126.7 98 62.2
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.5e-27 126.3 79 72.2
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.5e-27 126.3 103 58.3
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.9e-27 125.9 108 55.6
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.5e-27 125.6 87 71.3
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 3.3e-27 125.2 111 58.6
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 4.3e-27 124.8 112 57.1
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 4.3e-27 124.8 112 57.1
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 7.3e-27 124.0 94 61.7
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 7.3e-27 124.0 97 61.9
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 9.5e-27 123.6 100 59.0
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.2e-26 123.2 101 63.4
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.2e-26 123.2 110 57.3
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.6e-26 122.9 96 60.4
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 2.1e-26 122.5 80 70.0
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 2.1e-26 122.5 101 58.4
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.1e-26 122.5 112 56.2
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.8e-26 122.1 100 63.0
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 2.8e-26 122.1 105 60.0
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.6e-26 121.7 102 62.7
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 3.6e-26 121.7 61 85.2
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 4.7e-26 121.3 105 59.0
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 4.7e-26 121.3 91 63.7
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 4.7e-26 121.3 110 54.5
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 4.7e-26 121.3 101 60.4
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 4.7e-26 121.3 106 58.5
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 6.1e-26 120.9 98 64.3
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 6.1e-26 120.9 111 58.6
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 6.1e-26 120.9 107 58.9
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 8.0e-26 120.6 77 71.4
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.0e-25 120.2 101 58.4
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.4e-25 119.8 88 68.2
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.4e-25 119.8 101 59.4
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.4e-25 119.8 71 74.6
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.8e-25 119.4 99 56.6
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 2.3e-25 119.0 105 53.3
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 2.3e-25 119.0 90 64.4
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 4.0e-25 118.2 77 70.1
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 4.0e-25 118.2 77 70.1
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 8.9e-25 117.1 102 57.8
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.2e-24 116.7 85 68.2
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.2e-24 116.7 82 65.9
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 2.0e-24 115.9 73 68.5
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 2.6e-24 115.5 76 69.7
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 3.4e-24 115.2 92 60.9
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 3.4e-24 115.2 108 58.3
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 4.4e-24 114.8 79 67.1
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.4e-24 114.8 113 55.8
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 5.7e-24 114.4 78 67.9
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 5.7e-24 114.4 105 49.5
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 5.7e-24 114.4 66 72.7
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 5.7e-24 114.4 93 63.4
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 9.8e-24 113.6 111 55.0
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 9.8e-24 113.6 92 60.9
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.3e-23 113.2 76 68.4
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 2.2e-23 112.5 88 62.5
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 2.2e-23 112.5 110 51.8
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 2.2e-23 112.5 110 51.8
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 2.9e-23 112.1 70 72.9
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 2.9e-23 112.1 113 54.9
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 3.7e-23 111.7 117 49.6
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 3.7e-23 111.7 120 50.8
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.9e-23 111.3 91 61.5
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 4.9e-23 111.3 84 60.7
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 6.4e-23 110.9 103 52.4
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 6.4e-23 110.9 105 54.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 1.1e-22 110.2 99 53.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.8e-22 109.4 102 54.9
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 3.2e-22 108.6 77 63.6
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.1e-22 108.2 109 49.5
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 7.0e-22 107.5 68 72.1
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 9.2e-22 107.1 113 48.7
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 2.0e-21 105.9 127 44.9
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.6e-21 104.8 80 62.5
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.8e-21 104.0 82 62.2
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.0e-20 103.6 76 65.8
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 1.3e-20 103.2 59 72.9
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 5.0e-20 101.3 56 75.0
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.5e-19 99.8 107 48.6
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 9.5e-19 97.1 82 58.5
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 8.0e-18 94.0 67 62.7
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.8e-17 92.8 88 50.0
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 4.4e-16 88.2 59 66.1
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 6.4e-15 84.3 55 61.8
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 4.3e-11 71.6 57 52.6
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 2.2e-07 59.3 31 77.4


User provided reference genes

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