Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002122 Sechium edule HOM05D004056 ORTHO05D004894 4.0e-99 364.8 184 100.0
Sed0026975 Sechium edule HOM05D004056 ORTHO05D004894 3.6e-76 288.5 184 79.3
CsaV3_7G026330 Cucumis sativus L. HOM05D004056 ORTHO05D004894 6.0e-71 271.2 181 80.1
ClCG09G008620 Citrullus lanatus HOM05D004056 ORTHO05D004894 8.6e-70 267.3 179 78.8
MELO3C028860.2 Cucumis melo HOM05D004056 ORTHO05D004894 1.2e-58 230.3 246 57.3
MBI07_g18993_MAGBIO Magnolia biondii HOM05D004056 ORTHO05D004894 2.4e-48 196.1 180 57.8
Potri.002G246100 Populus trichocarpa HOM05D004056 ORTHO05D004894 2.4e-48 196.1 183 57.9
Sabra02G0187400 Salix brachista HOM05D004056 ORTHO05D004894 1.6e-47 193.4 183 56.3
TWI36G0821 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 6.0e-47 191.4 163 60.7
Prupe.8G198700 Prunus persica HOM05D004056 ORTHO05D004894 1.3e-46 190.3 179 58.7
CANSAT01G2574 Cannabis sativa HOM05D004056 ORTHO05D004894 2.3e-46 189.5 177 57.1
Gohir.A11G139600 Gossypium hirsutum HOM05D004056 ORTHO05D004894 3.0e-46 189.1 184 56.0
Thecc.01G219700 Theobroma cacao HOM05D004056 ORTHO05D004894 3.0e-46 189.1 169 61.5
Duzib133G0422 Durio zibethinus HOM05D004056 ORTHO05D004894 8.7e-46 187.6 183 56.8
Duzib138G1417 Durio zibethinus HOM05D004056 ORTHO05D004894 8.7e-46 187.6 179 57.0
COL.COLO4_34102 Corchorus olitorius HOM05D004056 ORTHO05D004894 1.1e-45 187.2 169 60.4
Nn1g07984 Nelumbo nucifera HOM05D004056 ORTHO05D004894 1.1e-45 187.2 153 64.7
TWI18G1219 Tripterygium wilfordii HOM05D004056 ORTHO05D004894 1.5e-45 186.8 179 56.4
Gohir.D11G145800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 3.3e-45 185.7 184 55.4
Hma1.2p1_0226F.1_g095370 Hydrangea macrophylla HOM05D004056 ORTHO05D004894 3.3e-45 185.7 181 55.8
arahy.Tifrunner.gnm1.ann1.8LB9ZD Arachis hypogaea HOM05D004056 ORTHO05D004894 4.3e-45 185.3 163 61.3
Cfa004161 Carpinus fangiana HOM05D004056 ORTHO05D004894 4.3e-45 185.3 153 64.1
Haze_15250 Corylus avellana HOM05D004056 ORTHO05D004894 4.3e-45 185.3 153 64.1
VMungo1383G1286 Vigna mungo HOM05D004056 ORTHO05D004894 5.6e-45 184.9 168 60.7
Duzib211G0551 Durio zibethinus HOM05D004056 ORTHO05D004894 9.6e-45 184.1 169 60.4
TAR633G1317 Trochodendron aralioides HOM05D004056 ORTHO05D004894 1.6e-44 183.3 150 62.7
MD10G1159600 Malus domestica HOM05D004056 ORTHO05D004894 2.1e-44 183.0 163 59.5
vmacro02784 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 2.1e-44 183.0 154 63.6
Gorai.007G156300 Gossypium raimondii HOM05D004056 ORTHO05D004894 2.8e-44 182.6 181 54.7
CiPaw.01G050800 Carya illinoinensis HOM05D004056 ORTHO05D004894 3.7e-44 182.2 181 56.4
Rhsim13G0047900 Rhododendron simsii HOM05D004056 ORTHO05D004894 3.7e-44 182.2 181 55.2
Actinidia39428 Actinidia chinensis HOM05D004056 ORTHO05D004894 4.8e-44 181.8 178 55.1
Gohir.A07G160800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 4.8e-44 181.8 182 55.5
Gorai.001G188300 Gossypium raimondii HOM05D004056 ORTHO05D004894 4.8e-44 181.8 182 55.5
QL09p051117 Quercus lobata HOM05D004056 ORTHO05D004894 4.8e-44 181.8 140 67.9
Atru.chr6.1427 Acer truncatum HOM05D004056 ORTHO05D004894 6.2e-44 181.4 139 68.3
Dinv00576 Davidia involucrata HOM05D004056 ORTHO05D004894 6.2e-44 181.4 180 53.9
Manes.13G049600 Manihot esculenta HOM05D004056 ORTHO05D004894 6.2e-44 181.4 183 54.1
Actinidia30050 Actinidia chinensis HOM05D004056 ORTHO05D004894 8.1e-44 181.0 170 56.5
CiPaw.02G023900 Carya illinoinensis HOM05D004056 ORTHO05D004894 8.1e-44 181.0 156 62.2
Dinv12647 Davidia involucrata HOM05D004056 ORTHO05D004894 1.4e-43 180.3 180 55.6
Gohir.D07G164400 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.4e-43 180.3 183 55.7
HPP92_024244 Vanilla planifolia HOM05D004056 ORTHO05D004894 1.8e-43 179.9 137 66.4
GSVIVG01003250001 Vitis vinifera HOM05D004056 ORTHO05D004894 1.8e-43 179.9 141 66.7
Lalb_Chr19g0125861 Lupinus albus HOM05D004056 ORTHO05D004894 3.1e-43 179.1 142 66.2
MD05G1171400 Malus domestica HOM05D004056 ORTHO05D004894 3.1e-43 179.1 156 60.9
Phvul.008G131500 Phaseolus vulgaris HOM05D004056 ORTHO05D004894 5.3e-43 178.3 167 61.1
arahy.Tifrunner.gnm1.ann1.2MPX2Y Arachis hypogaea HOM05D004056 ORTHO05D004894 6.9e-43 177.9 125 72.8
CDE02G4431 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 6.9e-43 177.9 173 54.3
CDE09G0677 Ceratophyllum demersum HOM05D004056 ORTHO05D004894 6.9e-43 177.9 149 59.7
ClCG07G002100 Citrullus lanatus HOM05D004056 ORTHO05D004894 6.9e-43 177.9 188 56.9
Gohir.A07G093100 Gossypium hirsutum HOM05D004056 ORTHO05D004894 6.9e-43 177.9 169 59.2
Gorai.001G105100 Gossypium raimondii HOM05D004056 ORTHO05D004894 6.9e-43 177.9 169 59.8
Lj3g0018087 Lotus japonicus HOM05D004056 ORTHO05D004894 1.2e-42 177.2 141 65.2
Manes.12G047500 Manihot esculenta HOM05D004056 ORTHO05D004894 1.2e-42 177.2 139 63.3
Gohir.D07G097700 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.5e-42 176.8 169 59.2
Ciclev10021891m.g Citrus clementina HOM05D004056 ORTHO05D004894 2.0e-42 176.4 133 69.9
Lj1A89T71 Lonicera japonica HOM05D004056 ORTHO05D004894 2.0e-42 176.4 184 52.7
FvH4_2g18520 Fragaria vesca HOM05D004056 ORTHO05D004894 2.6e-42 176.0 171 56.7
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 2.6e-42 176.0 171 56.7
MD10G1039600 Malus domestica HOM05D001916 ORTHO05D004894 3.4e-42 175.6 163 58.3
FAN27G1039 Fragaria x ananassa HOM05D004056 ORTHO05D004894 4.5e-42 175.3 163 58.9
Sed0007046 Sechium edule HOM05D004056 ORTHO05D004894 5.8e-42 174.9 171 57.9
TAR636G0170 Trochodendron aralioides HOM05D004056 ORTHO05D004894 7.6e-42 174.5 125 72.0
Cpa.g.sc21.106 Carica papaya HOM05D004056 ORTHO05D004894 1.0e-41 174.1 112 75.9
VMungo0331G1907 Vigna mungo HOM05D004056 ORTHO05D004894 1.0e-41 174.1 134 67.2
RcHm_v2.0_Chr6g0284081 Rosa chinensis HOM05D004056 ORTHO05D004894 1.3e-41 173.7 169 56.2
TAR362G0687 Trochodendron aralioides HOM05D004056 ORTHO05D004894 1.3e-41 173.7 134 66.4
Medtr7g055857 Medicago truncatula HOM05D004056 ORTHO05D004894 2.2e-41 172.9 145 64.8
Psat3g149240 Pisum sativum HOM05D004056 ORTHO05D004894 2.9e-41 172.6 145 63.4
Oeu051533.1 Olea europaea HOM05D004056 ORTHO05D004894 3.8e-41 172.2 183 55.2
TPR.G11183 Trifolium pratense HOM05D004056 ORTHO05D004894 3.8e-41 172.2 156 57.7
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 4.9e-41 171.8 171 56.7
Gohir.A07G198800 Gossypium hirsutum HOM05D004056 ORTHO05D004894 4.9e-41 171.8 141 63.1
Cc01_g16690 Coffea canephora HOM05D004056 ORTHO05D004894 6.5e-41 171.4 158 60.8
MELO3C022718.2 Cucumis melo HOM05D004056 ORTHO05D004894 6.5e-41 171.4 166 59.6
Medtr8g012655 Medicago truncatula HOM05D004056 ORTHO05D004894 1.4e-40 170.2 127 68.5
Aa31LG9G5020 Aethionema arabicum HOM05D004056 ORTHO05D004894 1.9e-40 169.9 116 71.6
ATR0561G205 Amborella trichopoda HOM05D004056 ORTHO05D004894 1.9e-40 169.9 136 64.7
Gohir.D07G205300 Gossypium hirsutum HOM05D004056 ORTHO05D004894 1.9e-40 169.9 144 61.8
Gorai.001G231300 Gossypium raimondii HOM05D004056 ORTHO05D004894 1.9e-40 169.9 144 61.8
Glyma.08G348300 Glycine max HOM05D004056 ORTHO05D004894 4.2e-40 168.7 120 72.5
Rhsim01G0253300 Rhododendron simsii HOM05D004056 ORTHO05D004894 4.2e-40 168.7 181 52.5
Aqoxy5G00024 Aquilegia oxysepala HOM05D004056 ORTHO05D004894 7.1e-40 167.9 149 60.4
vmacro14736 Vaccinium macrocarpon HOM05D004056 ORTHO05D004894 7.1e-40 167.9 151 59.6
CAN.G5.40 Capsicum annuum HOM05D004056 ORTHO05D004894 9.3e-40 167.5 153 60.1
Solyc09g059510.3 Solanum lycopersicum HOM05D004056 ORTHO05D004894 1.2e-39 167.2 153 60.1
Dinv19168 Davidia involucrata HOM05D004056 ORTHO05D004894 2.1e-39 166.4 140 62.9
Migut.D02503 Erythranthe guttata HOM05D004056 ORTHO05D004894 2.1e-39 166.4 113 74.3
Nitab4.5_0001161g0130 Nicotiana tabacum HOM05D004056 ORTHO05D004894 2.7e-39 166.0 119 69.7
Os02g0499000 Oryza sativa ssp. japonica HOM05D004056 ORTHO05D004894 2.7e-39 166.0 117 70.1
SalBow6G2821 Salvia bowleyana HOM05D004056 ORTHO05D004894 2.7e-39 166.0 121 71.9
SalBow6G5583 Salvia bowleyana HOM05D004056 ORTHO05D004894 2.7e-39 166.0 121 71.9
Thhalv10026242m.g Eutrema salsugineum HOM05D004056 ORTHO05D004894 3.5e-39 165.6 114 71.1
HPP92_006215 Vanilla planifolia HOM05D004056 ORTHO05D004894 3.5e-39 165.6 112 73.2
DCAR_012671 Daucus carota HOM05D004056 ORTHO05D004894 4.6e-39 165.2 142 60.6
Peaxi162Scf00068g00224 Petunia axillaris HOM05D004056 ORTHO05D004894 6.0e-39 164.9 120 70.8
Oeu057860.1 Olea europaea HOM05D004056 ORTHO05D004894 7.9e-39 164.5 126 67.5
MSTRG.20969 Avicennia marina HOM05D004056 ORTHO05D004894 1.0e-38 164.1 122 69.7
THA.LOC104804624 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 1.0e-38 164.1 108 74.1
Sc17g0002100 Simmondsia chinensis HOM05D004056 ORTHO05D004894 1.3e-38 163.7 127 65.4
PGSC0003DMG400017485 Solanum tuberosum HOM05D004056 ORTHO05D004894 1.3e-38 163.7 144 61.1
CsaV3_3G030040 Cucumis sativus L. HOM05D004056 ORTHO05D004894 2.3e-38 162.9 143 62.2
Zm00001eb241420 Zea mays HOM05D004056 ORTHO05D004894 2.3e-38 162.9 117 68.4
MSTRG.12776 Avicennia marina HOM05D004056 ORTHO05D004894 3.0e-38 162.5 148 58.1
Ca_03473_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 3.9e-38 162.2 95 84.2
ECA248G0601 Erigeron canadensis HOM05D004056 ORTHO05D004894 3.9e-38 162.2 112 72.3
CARHR218370 Cardamine hirsuta HOM05D004056 ORTHO05D004894 5.1e-38 161.8 149 58.4
MSTRG.18836 Avicennia marina HOM05D004056 ORTHO05D004894 6.7e-38 161.4 121 68.6
BcaB04g17724 Brassica carinata HOM05D004056 ORTHO05D004894 6.7e-38 161.4 106 75.5
Nitab4.5_0000045g0550 Nicotiana tabacum HOM05D004056 ORTHO05D004894 6.7e-38 161.4 99 77.8
Ca_23224_v3 Cicer arietinum L. HOM05D004056 ORTHO05D004894 8.7e-38 161.0 134 60.4
EL10Ac7g17907 Beta vulgaris HOM05D004056 ORTHO05D004894 1.5e-37 160.2 157 54.8
C08p08780 Brassica napus HOM05D004056 ORTHO05D004894 2.5e-37 159.5 115 69.6
Glyma.18G159900 Glycine max HOM05D004056 ORTHO05D004894 2.5e-37 159.5 119 68.1
Eucgr.K02136 Eucalyptus grandis HOM05D004056 ORTHO05D004894 3.3e-37 159.1 150 58.0
Sp7g10210 Schrenkiella parvula HOM05D004056 ORTHO05D004894 4.3e-37 158.7 106 73.6
TPR.G6483 Trifolium pratense HOM05D004056 ORTHO05D004894 4.3e-37 158.7 96 82.3
BcaC07g37403 Brassica carinata HOM05D004056 ORTHO05D004894 5.7e-37 158.3 115 68.7
BolC8t47725H Brassica oleracea HOM05D004056 ORTHO05D004894 5.7e-37 158.3 115 68.7
BraA08t32730Z Brassica rapa HOM05D004056 ORTHO05D004894 5.7e-37 158.3 103 74.8
SGA_v2.0_scaffold18G08335 Striga asiatica HOM05D004056 ORTHO05D004894 5.7e-37 158.3 135 63.7
TAR365G1100 Trochodendron aralioides HOM05D004056 ORTHO05D004894 5.7e-37 158.3 144 61.1
HanXRQChr01g0015301 Helianthus annuus HOM05D004056 ORTHO05D004894 7.4e-37 157.9 143 59.4
HanXRQChr04g0108001 Helianthus annuus HOM05D004056 ORTHO05D004894 7.4e-37 157.9 101 77.2
PGR044G2021 Punica granatum HOM05D004056 ORTHO05D004894 7.4e-37 157.9 111 67.6
unitig_736.g22344 Utricularia gibba HOM05D004056 ORTHO05D004894 7.4e-37 157.9 110 74.5
Lsat_1_v5_gn_5_180841 Lactuca sativa HOM05D004056 ORTHO05D004894 9.6e-37 157.5 101 75.2
unitig_26.g9438 Utricularia gibba HOM05D004056 ORTHO05D004894 1.6e-36 156.8 114 70.2
Lj1g0006098 Lotus japonicus HOM05D004056 ORTHO05D004894 2.8e-36 156.0 166 51.8
Lsat_1_v5_gn_8_89300 Lactuca sativa HOM05D004056 ORTHO05D004894 3.7e-36 155.6 109 69.7
AT4G13040 Arabidopsis thaliana HOM05D004056 ORTHO05D004894 4.8e-36 155.2 120 67.5
A08p07180 Brassica napus HOM05D004056 ORTHO05D004894 4.8e-36 155.2 111 69.4
AL9U11310 Arabidopsis lyrata HOM05D004056 ORTHO05D004894 6.2e-36 154.8 120 65.8
unitig_899.g15016 Utricularia gibba HOM05D004056 ORTHO05D004894 1.4e-35 153.7 123 64.2
unitig_699.g19750 Utricularia gibba HOM05D004056 ORTHO05D004894 1.8e-35 153.3 135 57.0
AUR62016545 Chenopodium quinoa HOM05D004056 ORTHO05D004894 2.4e-35 152.9 117 66.7
Sopen09g022670 Solanum pennellii HOM05D004056 ORTHO05D004894 3.1e-35 152.5 155 56.1
DCAR_018636 Daucus carota HOM05D004056 ORTHO05D004894 4.1e-35 152.1 152 53.3
Hund05580 Selenicereus undatus HOM05D004056 ORTHO05D004894 9.0e-35 151.0 128 59.4
Migut.N00633 Erythranthe guttata HOM05D004056 ORTHO05D004894 1.2e-34 150.6 177 48.6
Pp3c6_9830 Physcomitrium patens HOM05D004056 ORTHO05D004894 5.8e-34 148.3 102 68.6
SMO172G0031 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 7.6e-34 147.9 120 58.3
PSO063G1373 Papaver somniferum HOM05D004056 ORTHO05D004894 1.3e-33 147.1 151 55.0
AUR62001134 Chenopodium quinoa HOM05D004056 ORTHO05D004894 1.9e-32 143.3 116 63.8
unitig_749.g13591 Utricularia gibba HOM05D004056 ORTHO05D004894 1.9e-32 143.3 133 57.9
Pp3c5_19550 Physcomitrium patens HOM05D004056 ORTHO05D004894 3.2e-32 142.5 102 68.6
Hund18433 Selenicereus undatus HOM05D004056 ORTHO05D004894 5.5e-32 141.7 130 54.6
PSO017G4055 Papaver somniferum HOM05D004056 ORTHO05D004894 1.6e-31 140.2 152 50.7
C08p08770 Brassica napus HOM05D004056 ORTHO05D004894 3.5e-31 139.0 83 79.5
BolC8t47724H Brassica oleracea HOM05D004056 ORTHO05D004894 3.5e-31 139.0 83 79.5
Ah.08g214620 Amaranthus hybridus HOM05D004056 ORTHO05D004894 8.7e-30 134.4 113 60.2
ECA236G1380 Erigeron canadensis HOM05D004056 ORTHO05D004894 3.3e-29 132.5 83 74.7
HanXRQChr08g0235681 Helianthus annuus HOM05D004056 ORTHO05D004894 1.3e-25 120.6 81 69.1
THA.LOC104808796 Tarenaya hassleriana HOM05D004056 ORTHO05D004894 2.2e-25 119.8 108 57.4
SMO361G0763 Selaginella moellendorffii HOM05D004056 ORTHO05D004894 1.9e-24 116.7 99 57.6
Carub.0007s2973 Capsella rubella HOM05D004056 ORTHO05D004894 4.8e-20 102.1 70 70.0
Psat4g203800 Pisum sativum HOM05D004056 ORTHO05D004894 3.4e-18 95.9 91 58.2
SGA_v2.0_scaffold6G03510 Striga asiatica HOM05D004056 ORTHO05D004894 5.9e-18 95.1 57 80.7
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 6.5e-17 91.7 106 51.9
CBR_g38383 Chara braunii HOM05D004056 ORTHO05D004894 2.5e-16 89.7 119 42.0
CSS0004822 Camellia sinensis var. sinensis HOM05D004056 ORTHO05D004894 2.7e-15 86.3 83 54.2
HPP92_024205 Vanilla planifolia HOM05D004056 ORTHO05D004894 1.1e-11 74.3 63 58.7
Pp3c13_22780 Physcomitrium patens HOM05D004056 ORTHO05D004504 1.2e-10 70.9 116 37.1
Pp3c4_8660 Physcomitrium patens HOM05D004056 ORTHO05D004504 1.0e-09 67.8 74 50.0
RcHm_v2.0_Chr3g0472871 Rosa chinensis HOM05D004056 ORTHO05D004894 1.7e-09 67.0 40 75.0
HanXRQChr12g0358981 Helianthus annuus HOM05D004056 ORTHO05D004894 1.2e-07 60.8 43 62.8
MCO16G666 Micromonas commoda HOM05D000138 ORTHO05D267761 8.0e-07 58.2 107 38.3


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