Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002104 Sechium edule HOM05D001218 ORTHO05D011584 2.5e-31 138.3 76 100.0
MELO3C024296.2 Cucumis melo HOM05D001218 ORTHO05D011584 1.7e-19 99.0 77 79.2
CsaV3_7G033830 Cucumis sativus L. HOM05D001218 ORTHO05D011584 1.9e-18 95.5 77 76.6
ClCG09G001500 Citrullus lanatus HOM05D001218 ORTHO05D011584 4.1e-18 94.4 74 75.7
CiPaw.07G074600 Carya illinoinensis HOM05D001218 ORTHO05D011584 1.6e-09 65.9 57 64.9
TAR375G0723 Trochodendron aralioides HOM05D001218 ORTHO05D004088 1.6e-09 65.9 71 54.9
Dinv43989 Davidia involucrata HOM05D001218 ORTHO05D011584 7.8e-09 63.5 65 58.5
Atru.chr8.848 Acer truncatum HOM05D001218 ORTHO05D011584 1.0e-08 63.2 58 63.8
Duzib235G1528 Durio zibethinus HOM05D001218 ORTHO05D011584 5.1e-08 60.8 58 60.3
Actinidia30977 Actinidia chinensis HOM05D001218 ORTHO05D011584 6.6e-08 60.5 58 60.3
Ciclev10013226m.g Citrus clementina HOM05D001218 ORTHO05D011584 8.7e-08 60.1 76 50.0
Nn1g08050 Nelumbo nucifera HOM05D001218 ORTHO05D004088 1.9e-07 58.9 71 50.7
MBI01_g22962_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 3.3e-07 58.2 64 51.6
MSTRG.24899 Avicennia marina HOM05D001218 ORTHO05D004088 4.3e-07 57.8 71 49.3
MSTRG.4981 Avicennia marina HOM05D018604 ORTHO05D011584 4.3e-07 57.8 81 50.6
Oeu064732.1 Olea europaea HOM05D001218 ORTHO05D004088 4.3e-07 57.8 64 51.6
PSO210G6488 Papaver somniferum HOM05D001218 ORTHO05D004088 5.6e-07 57.4 74 48.6
Peaxi162Scf00064g01432 Petunia axillaris HOM05D001218 ORTHO05D004088 5.6e-07 57.4 64 53.1
COL.COLO4_30953 Corchorus olitorius HOM05D001218 ORTHO05D011584 7.3e-07 57.0 69 50.7
Lj4C3G12 Lonicera japonica HOM05D001218 ORTHO05D004088 7.3e-07 57.0 64 50.0
MBI04_g22928_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 7.3e-07 57.0 67 49.3
PSO210G1993 Papaver somniferum HOM05D001218 ORTHO05D004088 7.3e-07 57.0 75 49.3
ATR0605G031 Amborella trichopoda HOM05D001218 ORTHO05D004088 9.6e-07 56.6 64 53.1
CDE10G0658 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 9.6e-07 56.6 64 51.6
GSVIVG01026761001 Vitis vinifera HOM05D001218 ORTHO05D011584 1.6e-06 55.8 75 50.7
Eucgr.E01760 Eucalyptus grandis HOM05D001218 ORTHO05D011584 2.1e-06 55.5 76 47.4
Nitab4.5_0001309g0150 Nicotiana tabacum HOM05D001218 ORTHO05D004088 2.1e-06 55.5 68 47.1
Nitab4.5_0003423g0060 Nicotiana tabacum HOM05D001218 ORTHO05D004088 2.1e-06 55.5 68 47.1
Cfa014150 Carpinus fangiana HOM05D001218 ORTHO05D004088 2.8e-06 55.1 64 48.4
Solyc12g095760.2 Solanum lycopersicum HOM05D001218 ORTHO05D004088 2.8e-06 55.1 64 51.6
Sopen12g031660 Solanum pennellii HOM05D001218 ORTHO05D004088 2.8e-06 55.1 64 51.6
PGSC0003DMG400029309 Solanum tuberosum HOM05D001218 ORTHO05D004088 2.8e-06 55.1 64 51.6
SGA_v2.0_scaffold161G37861 Striga asiatica HOM05D001218 ORTHO05D004088 2.8e-06 55.1 64 50.0
TAR625G0052 Trochodendron aralioides HOM05D001218 ORTHO05D004088 2.8e-06 55.1 64 48.4
CAN.G208.42 Capsicum annuum HOM05D001218 ORTHO05D004088 3.6e-06 54.7 64 50.0
MBI04_g42538_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 4.7e-06 54.3 68 47.1
Nitab4.5_0000464g0120 Nicotiana tabacum HOM05D001218 ORTHO05D004088 4.7e-06 54.3 68 45.6
PGSC0003DMG400010007 Solanum tuberosum HOM05D001218 ORTHO05D004088 4.7e-06 54.3 66 47.0
THA.LOC104812017 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 4.7e-06 54.3 62 50.0
CiPaw.07G131800 Carya illinoinensis HOM05D001218 ORTHO05D004088 6.2e-06 53.9 64 48.4
CDE05G0891 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 6.2e-06 53.9 64 48.4
Hma1.2p1_0489F.1_g164180 Hydrangea macrophylla HOM05D001218 ORTHO05D004088 6.2e-06 53.9 64 50.0
Lsat_1_v5_gn_2_3161 Lactuca sativa HOM05D001218 ORTHO05D004088 6.2e-06 53.9 64 46.9
Potri.006G024500 Populus trichocarpa HOM05D001218 ORTHO05D011584 6.2e-06 53.9 65 49.2
THA.LOC104813730 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 6.2e-06 53.9 62 50.0
Actinidia15552 Actinidia chinensis HOM05D001218 ORTHO05D004088 8.1e-06 53.5 70 45.7
QL02p016004 Quercus lobata HOM05D001218 ORTHO05D004088 8.1e-06 53.5 64 45.3
Solyc04g082880.4 Solanum lycopersicum HOM05D001218 ORTHO05D004088 8.1e-06 53.5 66 47.0
Sopen04g036520 Solanum pennellii HOM05D001218 ORTHO05D004088 8.1e-06 53.5 66 47.0


User provided reference genes

Program Settings