Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 6.9e-240 833.6 419 100.0
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.3e-217 759.6 427 87.6
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 6.3e-217 757.3 427 87.4
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.1e-216 756.5 427 88.3
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 4.4e-186 654.8 429 74.6
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 1.7e-185 652.9 429 73.4
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.7e-185 652.9 433 73.2
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.7e-185 652.9 427 72.1
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.2e-183 646.7 430 73.0
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 7.7e-183 644.0 425 73.4
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.3e-182 643.3 425 73.9
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.3e-182 643.3 427 73.8
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 3.8e-182 641.7 428 72.9
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 5.0e-182 641.3 425 72.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 5.0e-182 641.3 430 73.7
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.1e-181 640.2 426 71.6
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 1.5e-181 639.8 425 72.9
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 3.2e-181 638.6 428 70.6
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 3.2e-181 638.6 423 69.7
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 9.5e-181 637.1 427 72.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 2.8e-180 635.6 427 73.1
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 2.8e-180 635.6 432 72.5
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.6e-180 635.2 429 72.5
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.5e-178 629.8 427 72.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 2.0e-178 629.4 427 71.9
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.3e-177 626.7 427 71.4
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.2e-177 625.9 427 71.7
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 2.8e-177 625.5 427 71.9
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 8.3e-177 624.0 427 71.2
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 1.8e-176 622.9 432 72.0
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 5.4e-176 621.3 428 71.5
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 7.0e-176 620.9 425 72.2
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 4.5e-175 618.2 422 69.4
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 4.5e-175 618.2 428 71.0
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 5.9e-175 617.8 404 74.3
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.8e-175 617.5 426 69.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.0e-174 617.1 431 71.7
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 1.3e-174 616.7 430 72.1
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 2.9e-174 615.5 429 72.5
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 1.6e-172 609.8 427 69.3
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.8e-172 609.0 433 69.5
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 2.8e-172 609.0 426 68.1
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 3.6e-172 608.6 430 71.2
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 6.1e-172 607.8 420 72.1
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 4.0e-171 605.1 415 71.1
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 8.9e-171 604.0 431 67.1
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.5e-170 603.2 405 73.8
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 9.8e-170 600.5 432 69.0
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.2e-169 599.4 430 68.4
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.2e-169 599.4 408 71.8
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 2.2e-169 599.4 410 71.2
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 4.1e-168 595.1 410 70.5
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 7.0e-168 594.3 427 67.0
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 9.2e-168 594.0 444 67.8
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 3.5e-167 592.0 422 66.6
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.0e-166 590.5 428 68.5
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.2e-164 583.6 422 66.6
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 3.1e-163 578.9 435 67.6
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.3e-161 573.5 424 67.7
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 2.2e-161 572.8 398 68.6
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.9e-161 572.4 434 64.5
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 2.0e-159 566.2 351 77.5
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 1.0e-158 563.9 390 69.2
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.7e-158 563.1 423 65.5
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.9e-157 559.7 423 63.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 1.9e-157 559.7 423 63.4
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 4.3e-157 558.5 427 65.1
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 6.2e-156 554.7 424 63.4
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.1e-155 553.9 423 62.9
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 2.3e-155 552.7 424 64.6
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 3.1e-155 552.4 422 65.2
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 8.9e-155 550.8 421 62.9
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 1.5e-154 550.1 423 65.0
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 2.0e-154 549.7 425 63.5
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 9.8e-154 547.4 427 63.0
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.3e-153 547.0 424 62.3
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 3.7e-153 545.4 405 64.0
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 7.1e-152 541.2 383 71.5
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.2e-151 540.4 406 64.3
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.7e-151 539.3 421 66.3
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 4.6e-151 538.5 406 66.7
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 7.8e-151 537.7 423 62.2
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.3e-150 537.0 329 77.8
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 1.1e-149 533.9 424 61.3
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 1.6e-148 530.0 453 58.7
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 6.8e-147 524.6 352 71.6
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 8.4e-145 517.7 382 67.8
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.2e-144 515.8 438 60.7
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 8.6e-142 507.7 412 61.4
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 6.2e-140 501.5 409 65.8
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 8.1e-140 501.1 389 62.7
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 6.9e-139 498.0 428 58.4
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 9.9e-138 494.2 407 63.9
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 1.9e-136 490.0 408 58.8
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 7.8e-135 484.6 409 61.4
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.9e-134 482.3 425 57.6
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 1.3e-132 477.2 403 59.1
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 2.8e-132 476.1 417 62.1
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 2.4e-128 463.0 395 57.5
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.6e-127 460.3 326 70.6
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 1.7e-113 413.7 264 77.7
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.8e-110 403.7 421 50.6
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 2.1e-103 380.2 304 64.1
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 1.9e-101 373.6 400 50.2
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 8.2e-92 341.7 398 48.0
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 4.5e-90 335.9 217 70.5
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.1e-88 331.3 412 45.6
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 2.0e-85 320.5 320 55.0
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 2.0e-82 310.5 382 45.8
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 2.4e-75 287.0 304 49.7
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.8e-70 268.9 195 61.0
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 4.7e-55 219.5 128 79.7
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.5e-53 214.5 165 58.8
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 3.7e-52 209.9 133 70.7
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 9.2e-51 205.3 223 51.1
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 3.5e-50 203.4 156 62.2
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 2.2e-36 157.5 97 74.2
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 3.7e-36 156.8 124 58.1
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.2e-35 152.1 124 56.5
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 8.1e-31 139.0 82 84.1
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.1e-27 128.6 92 76.1
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 3.2e-27 127.1 134 50.7
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 2.0e-21 107.8 103 57.3
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 7.1e-19 99.4 94 54.3
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 1.4e-14 85.1 53 66.0
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 3.5e-10 70.5 47 63.8


User provided reference genes

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