Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 2.4e-117 425.6 231 100.0
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 4.7e-113 411.4 231 93.1
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 6.7e-112 407.5 231 95.7
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 6.7e-112 407.5 231 95.7
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 5.7e-111 404.4 231 94.8
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 3.4e-108 395.2 231 90.5
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 5.0e-107 391.3 231 89.6
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 1.2e-105 386.7 231 86.1
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 1.6e-105 386.3 231 88.3
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 2.7e-105 385.6 229 89.1
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 2.7e-105 385.6 231 86.6
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 3.6e-105 385.2 231 87.0
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 4.7e-105 384.8 229 86.5
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 8.0e-105 384.0 234 85.0
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 8.0e-105 384.0 228 86.8
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 1.8e-104 382.9 231 86.6
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 1.8e-104 382.9 231 88.3
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 1.8e-104 382.9 231 88.7
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 2.3e-104 382.5 231 85.3
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 3.9e-104 381.7 231 86.6
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 3.9e-104 381.7 229 89.5
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 3.9e-104 381.7 232 87.1
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 3.9e-104 381.7 232 86.6
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 8.8e-104 380.6 231 86.1
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 1.5e-103 379.8 231 87.4
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 1.5e-103 379.8 232 85.3
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.0e-103 379.4 229 87.8
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.0e-103 379.4 231 86.6
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.0e-103 379.4 231 86.6
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 2.6e-103 379.0 231 85.7
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 4.4e-103 378.3 232 87.5
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 4.4e-103 378.3 235 86.4
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 5.7e-103 377.9 231 86.1
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 5.7e-103 377.9 228 88.2
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 7.4e-103 377.5 229 89.5
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 9.7e-103 377.1 231 85.3
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 9.7e-103 377.1 231 85.3
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 1.3e-102 376.7 231 86.1
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 1.3e-102 376.7 228 86.8
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 1.3e-102 376.7 232 84.1
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 1.7e-102 376.3 231 85.3
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.7e-102 376.3 231 84.8
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 2.2e-102 375.9 227 86.3
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 2.8e-102 375.6 231 85.3
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 2.8e-102 375.6 231 85.3
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.8e-102 375.6 228 85.5
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 3.7e-102 375.2 231 84.4
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 3.7e-102 375.2 227 86.3
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 4.8e-102 374.8 231 87.0
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 6.3e-102 374.4 229 85.2
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 8.2e-102 374.0 231 85.3
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 8.2e-102 374.0 229 85.2
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 1.1e-101 373.6 229 85.2
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 1.1e-101 373.6 231 84.4
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 1.1e-101 373.6 225 85.3
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 1.1e-101 373.6 231 84.0
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 1.4e-101 373.2 231 84.8
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 1.8e-101 372.9 231 84.0
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 1.8e-101 372.9 229 85.2
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.8e-101 372.9 229 85.2
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 2.4e-101 372.5 231 84.4
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 2.4e-101 372.5 231 84.8
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 3.1e-101 372.1 232 84.1
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 4.1e-101 371.7 232 84.5
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 5.3e-101 371.3 231 84.4
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 5.3e-101 371.3 231 84.8
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 7.0e-101 370.9 235 83.0
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 7.0e-101 370.9 230 85.2
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 7.0e-101 370.9 231 84.8
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 7.0e-101 370.9 231 85.7
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 9.1e-101 370.5 231 84.0
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 9.1e-101 370.5 231 84.4
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.2e-100 370.2 231 84.4
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 2.6e-100 369.0 231 83.1
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 2.6e-100 369.0 227 84.1
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 3.5e-100 368.6 231 83.1
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 3.5e-100 368.6 232 84.1
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 4.5e-100 368.2 231 82.7
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 4.5e-100 368.2 224 84.4
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 4.5e-100 368.2 231 82.3
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 7.7e-100 367.5 231 82.7
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 7.7e-100 367.5 231 82.7
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 1.0e-99 367.1 207 90.8
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 1.0e-99 367.1 232 85.8
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 1.3e-99 366.7 231 81.8
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 1.3e-99 366.7 229 83.8
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 1.7e-99 366.3 231 84.0
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 1.7e-99 366.3 231 82.7
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 1.7e-99 366.3 207 91.3
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 1.7e-99 366.3 229 83.8
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 2.2e-99 365.9 231 81.4
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 2.9e-99 365.5 231 83.5
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 2.9e-99 365.5 233 82.8
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 3.8e-99 365.2 231 83.5
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 3.8e-99 365.2 231 83.5
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 3.8e-99 365.2 231 83.5
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 3.8e-99 365.2 231 82.3
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 5.0e-99 364.8 231 83.5
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 8.5e-99 364.0 231 83.1
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 1.1e-98 363.6 235 82.6
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.9e-98 362.8 258 76.0
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 2.5e-98 362.5 221 85.5
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 7.2e-98 360.9 230 84.3
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 7.2e-98 360.9 231 81.8
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 2.1e-97 359.4 204 89.7
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 6.1e-97 357.8 228 79.4
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 6.1e-97 357.8 218 84.9
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 3.3e-95 352.1 228 80.3
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 9.7e-95 350.5 228 78.1
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 7.7e-92 340.9 226 77.0
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 1.3e-91 340.1 235 77.9
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 5.0e-91 338.2 233 78.1
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 1.2e-89 333.6 300 63.7
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 6.1e-89 331.3 192 88.5
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 7.7e-84 314.3 216 73.6
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 9.5e-82 307.4 204 77.5
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 1.5e-79 300.1 207 74.4
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 1.8e-77 293.1 181 87.3
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 4.1e-77 292.0 194 84.5
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 4.5e-76 288.5 194 80.9
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 2.9e-75 285.8 221 68.8
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.2e-73 280.4 161 90.1
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 3.6e-73 278.9 158 92.4
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 4.7e-73 278.5 158 91.8
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.8e-72 276.6 158 89.9
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 1.2e-71 273.9 179 79.9
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 3.4e-71 272.3 155 90.3
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 2.9e-70 269.2 166 84.9
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 7.8e-68 261.2 161 84.5
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 7.8e-68 261.2 184 75.0
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-67 259.6 186 72.0
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 2.9e-62 242.7 160 78.1
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 6.4e-54 214.9 124 88.7
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 5.1e-51 205.3 161 70.8
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.7e-43 180.3 110 87.3
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 7.3e-42 174.9 103 86.4
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 1.2e-39 167.5 93 96.8
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.1e-34 151.0 158 55.7
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 4.8e-33 145.6 88 87.5
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 5.4e-29 132.1 79 79.7
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 4.8e-25 119.0 206 38.3
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 2.0e-23 113.6 81 76.5
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.2e-22 110.2 57 91.2
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 4.3e-18 95.9 65 75.4
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 1.1e-16 91.3 66 69.7
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 1.0e-14 84.7 65 63.1
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 2.5e-10 70.1 46 73.9


User provided reference genes

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