Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 3.7e-88 330.1 621 100.0
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 2.1e-51 208.0 620 89.7
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 5.8e-25 120.2 134 56.7
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 6.0e-22 110.2 123 56.9
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 1.3e-21 109.0 123 51.2
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 9.5e-20 102.8 76 63.2
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 3.6e-19 100.9 247 69.2
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.4e-18 99.0 98 52.0
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 8.9e-18 96.3 140 49.3
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.2e-16 91.7 106 50.0
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.9e-16 91.3 100 46.0
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 4.9e-16 90.5 100 46.0
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 2.4e-15 88.2 277 64.6
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 5.4e-15 87.0 74 56.8
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 2.7e-14 84.7 66 54.5
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 7.8e-14 83.2 70 54.3
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.0e-13 82.8 139 44.6
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 6.6e-13 80.1 75 49.3
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 6.6e-13 80.1 138 39.9
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 8.6e-13 79.7 118 44.1
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 1.1e-12 79.3 110 48.2
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 5.6e-12 77.0 96 53.1
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 7.3e-12 76.6 117 40.2
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 1.2e-11 75.9 114 43.0
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 1.2e-11 75.9 61 55.7
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 1.2e-11 75.9 112 47.3
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 1.6e-11 75.5 79 54.4
FAN27G0396 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.8e-11 74.7 117 39.3
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.2e-11 73.6 117 39.3
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 8.1e-11 73.2 75 48.0
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 2.3e-10 71.6 94 42.6
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 2.3e-10 71.6 128 42.2
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 6.8e-10 70.1 108 39.8
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 8.9e-10 69.7 108 40.7
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.5e-09 68.9 111 44.1
QL12p042932 Quercus lobata HOM05D000162 ORTHO05D000090 2.6e-09 68.2 108 39.8
Atru.chr6.231 Acer truncatum HOM05D000162 ORTHO05D000090 5.8e-09 67.0 61 49.2
CANSAT11G1734 Cannabis sativa HOM05D000162 ORTHO05D000090 5.8e-09 67.0 94 43.6
Sed0000927 Sechium edule HOM05D008619 ORTHO05D000090 5.8e-09 67.0 52 59.6
Thecc.01G265100 Theobroma cacao HOM05D008619 ORTHO05D000090 5.8e-09 67.0 104 37.5
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 2.2e-08 65.1 69 47.8
CSS0034526 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 2.4e-07 61.6 88 38.6
Sc05g0000860 Simmondsia chinensis HOM05D000162 ORTHO05D000090 2.4e-07 61.6 99 34.3
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.2e-07 61.2 109 36.7
CSS0040127 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 4.1e-07 60.8 88 37.5
vmacro02633 Vaccinium macrocarpon HOM05D008619 ORTHO05D000090 5.4e-07 60.5 89 40.4
CANSAT80G2501 Cannabis sativa HOM05D000162 ORTHO05D000090 7.1e-07 60.1 107 39.3
ClCG09G021740 Citrullus lanatus HOM05D016535 ORTHO05D000090 7.1e-07 60.1 68 48.5
Atru.chr6.396 Acer truncatum HOM05D000162 ORTHO05D000090 9.2e-07 59.7 77 39.0
Atru.chr6.444 Acer truncatum HOM05D000162 ORTHO05D000090 9.2e-07 59.7 77 39.0
Eucgr.K03302 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.2e-06 59.3 70 44.3
Ciclev10024138m.g Citrus clementina HOM05D000162 ORTHO05D000090 2.1e-06 58.5 81 38.3
Eucgr.K03304 Eucalyptus grandis HOM05D000162 ORTHO05D000090 3.5e-06 57.8 127 37.0
Duzib138G1327 Durio zibethinus HOM05D008619 ORTHO05D000090 6.0e-06 57.0 89 36.0
Lj1P60T47 Lonicera japonica HOM05D008619 ORTHO05D000090 6.0e-06 57.0 112 35.7


User provided reference genes

Program Settings