Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 2.7e-74 282.0 149 100.0
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 8.9e-57 223.8 154 82.5
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.8e-54 216.1 146 81.5
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.0e-40 169.5 153 68.6
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 5.8e-40 167.9 125 64.8
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.9e-40 167.2 123 77.2
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 9.9e-40 167.2 121 75.2
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 3.7e-39 165.2 148 66.9
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-38 163.7 147 69.4
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-38 163.7 147 69.4
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.9e-38 162.9 146 65.1
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.2e-38 162.2 147 66.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.2e-37 160.2 148 65.5
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 2.1e-37 159.5 143 67.8
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 2.7e-37 159.1 150 66.0
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 1.3e-36 156.8 145 67.6
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.3e-36 156.0 128 70.3
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.3e-36 156.0 106 78.3
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 3.0e-36 155.6 153 61.4
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 5.1e-36 154.8 146 63.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.6e-35 151.4 148 63.5
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.2e-34 150.2 121 71.9
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 2.1e-34 149.4 146 66.4
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 3.6e-34 148.7 121 72.7
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 3.6e-34 148.7 147 63.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 6.2e-34 147.9 130 65.4
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.1e-33 147.1 99 82.8
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.4e-33 146.0 122 70.5
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 4.0e-33 145.2 108 78.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 5.2e-33 144.8 145 63.4
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 8.9e-33 144.1 105 76.2
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.2e-32 143.7 104 79.8
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.2e-32 143.7 144 62.5
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.2e-32 143.7 103 75.7
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.5e-32 143.3 103 76.7
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.0e-32 142.9 132 66.7
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 2.0e-32 142.9 109 77.1
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 2.0e-32 142.9 147 59.9
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.0e-32 142.9 99 80.8
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.6e-32 142.5 103 77.7
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 2.6e-32 142.5 145 64.8
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.4e-32 142.1 144 61.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 3.4e-32 142.1 105 77.1
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 3.4e-32 142.1 105 77.1
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.4e-32 141.7 110 76.4
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 5.8e-32 141.4 105 74.3
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 5.8e-32 141.4 108 74.1
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 5.8e-32 141.4 110 72.7
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 7.6e-32 141.0 124 65.3
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 9.9e-32 140.6 118 68.6
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.3e-31 140.2 116 70.7
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.2e-31 139.4 102 75.5
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 2.9e-31 139.0 116 70.7
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.9e-31 139.0 102 77.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 6.4e-31 137.9 108 73.1
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 6.4e-31 137.9 124 64.5
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 8.4e-31 137.5 127 66.1
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.1e-30 137.1 105 73.3
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.4e-30 136.7 122 66.4
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.4e-30 136.7 100 78.0
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.4e-30 136.7 126 57.9
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.9e-30 136.3 127 66.1
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 3.2e-30 135.6 121 64.5
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.2e-30 135.6 100 78.0
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 4.1e-30 135.2 100 77.0
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 4.1e-30 135.2 100 77.0
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 5.4e-30 134.8 100 77.0
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 5.4e-30 134.8 100 77.0
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 5.4e-30 134.8 100 77.0
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 5.4e-30 134.8 100 77.0
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 5.4e-30 134.8 100 77.0
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 9.2e-30 134.0 100 77.0
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 9.2e-30 134.0 127 65.4
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-29 133.7 127 65.4
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 1.6e-29 133.3 110 69.1
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.6e-29 133.3 115 69.6
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.1e-29 132.9 129 63.6
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.1e-29 132.9 98 77.6
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 2.1e-29 132.9 132 62.9
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.7e-29 132.5 100 75.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.7e-29 132.5 100 75.0
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.7e-29 132.5 144 59.7
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.7e-29 132.5 100 72.0
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 4.6e-29 131.7 148 58.1
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 6.0e-29 131.3 112 70.5
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 7.8e-29 131.0 127 63.0
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.3e-28 130.2 101 73.3
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.7e-28 129.8 143 61.5
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 8.7e-28 127.5 107 70.1
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.1e-27 127.1 103 72.8
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.3e-27 125.6 118 66.9
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.3e-27 125.6 93 66.7
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 7.3e-27 124.4 149 57.7
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.2e-26 123.6 97 70.1
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 8.1e-26 120.9 93 71.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 9.9e-24 114.0 75 84.0
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.2e-23 112.8 75 82.7
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.9e-23 112.5 94 72.3
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 3.8e-23 112.1 83 77.1
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 8.4e-23 110.9 98 65.3
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 1.1e-22 110.5 90 67.8
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.9e-22 109.8 79 75.9
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 7.8e-21 104.4 122 53.3
CsaV3_4G036390 Cucumis sativus L. HOM05D018710 ORTHO05D009055 2.3e-20 102.8 83 65.1
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 6.6e-20 101.3 83 66.3
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 4.3e-11 72.0 84 48.8
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 3.4e-08 62.4 58 48.3


User provided reference genes

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