Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 1.5e-50 202.6 105 100.0
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 2.2e-33 145.6 106 70.8
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 2.4e-32 142.1 108 72.2
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 2.4e-32 142.1 102 70.6
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 4.1e-32 141.4 71 91.5
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.6e-31 139.4 75 89.3
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 2.0e-31 139.0 71 90.1
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 3.5e-31 138.3 71 85.9
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 4.5e-31 137.9 91 72.5
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 4.5e-31 137.9 74 87.8
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 4.5e-31 137.9 104 69.2
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 4.5e-31 137.9 110 69.1
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 4.5e-31 137.9 71 91.5
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.9e-31 137.5 70 91.4
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 7.7e-31 137.1 75 86.7
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 7.7e-31 137.1 71 88.7
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 1.0e-30 136.7 76 85.5
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.3e-30 136.3 71 87.3
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.3e-30 136.3 89 76.4
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 1.7e-30 136.0 97 69.1
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 1.7e-30 136.0 70 87.1
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 2.2e-30 135.6 73 86.3
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.2e-30 135.6 75 85.3
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.2e-30 135.6 75 85.3
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 2.2e-30 135.6 105 66.7
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 2.9e-30 135.2 71 85.9
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.9e-30 135.2 71 85.9
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 2.9e-30 135.2 73 87.7
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 2.9e-30 135.2 105 68.6
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 2.9e-30 135.2 73 82.2
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 3.8e-30 134.8 74 86.5
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 3.8e-30 134.8 73 87.7
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 5.0e-30 134.4 97 66.0
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 5.0e-30 134.4 109 64.2
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 5.0e-30 134.4 75 85.3
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 5.0e-30 134.4 75 85.3
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 5.0e-30 134.4 85 77.6
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 5.0e-30 134.4 92 71.7
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 5.0e-30 134.4 94 71.3
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 5.0e-30 134.4 74 85.1
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 6.5e-30 134.0 71 84.5
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 6.5e-30 134.0 75 84.0
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 6.5e-30 134.0 72 87.5
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 8.5e-30 133.7 103 65.0
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 8.5e-30 133.7 70 87.1
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.1e-29 133.3 74 85.1
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.1e-29 133.3 110 62.7
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.1e-29 133.3 71 85.9
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.5e-29 132.9 75 84.0
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 1.5e-29 132.9 75 84.0
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.5e-29 132.9 71 81.7
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.9e-29 132.5 105 65.7
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 2.5e-29 132.1 85 70.6
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 3.2e-29 131.7 73 83.6
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 3.2e-29 131.7 68 86.8
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 3.2e-29 131.7 92 69.6
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 3.2e-29 131.7 97 67.0
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 4.2e-29 131.3 72 84.7
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 4.2e-29 131.3 69 85.5
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 4.2e-29 131.3 70 82.9
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 4.2e-29 131.3 71 84.5
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 5.5e-29 131.0 111 64.0
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 5.5e-29 131.0 75 82.7
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 7.2e-29 130.6 75 82.7
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 9.4e-29 130.2 74 82.4
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 9.4e-29 130.2 74 82.4
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 9.4e-29 130.2 74 82.4
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.2e-28 129.8 74 82.4
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.2e-28 129.8 74 82.4
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.2e-28 129.8 74 82.4
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.2e-28 129.8 102 67.6
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 1.2e-28 129.8 74 81.1
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 1.2e-28 129.8 72 83.3
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 1.6e-28 129.4 106 65.1
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.1e-28 129.0 71 78.9
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 2.1e-28 129.0 71 83.1
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 2.7e-28 128.6 87 71.3
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 3.6e-28 128.3 90 70.0
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 3.6e-28 128.3 74 82.4
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.7e-28 127.9 72 84.7
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.7e-28 127.9 72 84.7
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 6.1e-28 127.5 68 86.8
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.1e-28 127.5 72 83.3
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.1e-28 127.5 72 83.3
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 6.1e-28 127.5 110 62.7
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.0e-27 126.7 72 83.3
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.3e-27 125.6 67 80.6
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 5.2e-27 124.4 72 80.6
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 6.7e-27 124.0 71 78.9
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.1e-26 123.2 68 77.9
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.5e-26 122.9 71 76.1
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.3e-26 121.7 71 77.5
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 7.5e-26 120.6 66 81.8
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 2.2e-25 119.0 62 82.3
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 2.8e-25 118.6 63 82.5
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 3.7e-25 118.2 98 58.2
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 5.3e-24 114.4 65 78.5
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 7.0e-24 114.0 111 54.1
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 2.2e-22 109.0 71 69.0
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 5.0e-22 107.8 72 70.8
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 9.4e-21 103.6 71 69.0
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 1.6e-20 102.8 71 64.8
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 4.7e-20 101.3 75 68.0
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 1.9e-13 79.3 63 54.0
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 7.2e-13 77.4 43 83.7
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 1.3e-09 66.6 71 54.9
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 2.2e-09 65.9 47 74.5
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 2.8e-09 65.5 38 84.2
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 7.7e-07 57.4 37 78.4
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 7.7e-07 57.4 66 53.0


User provided reference genes

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