Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 1.7e-54 215.7 105 100.0
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 2.5e-37 158.7 105 71.4
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 7.2e-37 157.1 105 69.5
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 1.6e-36 156.0 105 72.4
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 4.8e-25 117.9 103 51.5
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 3.5e-23 111.7 103 46.6
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 4.5e-23 111.3 97 49.5
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 4.5e-23 111.3 97 48.5
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 4.5e-23 111.3 97 48.5
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 5.9e-23 110.9 97 49.5
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 7.7e-23 110.5 100 51.0
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 1.7e-22 109.4 95 50.5
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 2.9e-22 108.6 97 49.5
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 2.9e-22 108.6 97 46.4
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 3.8e-22 108.2 93 51.6
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 5.0e-22 107.8 97 46.4
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.1e-21 106.7 97 46.4
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.1e-21 106.7 97 46.4
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 1.1e-21 106.7 95 48.4
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 1.1e-21 106.7 97 46.4
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.9e-21 105.9 97 46.4
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 2.5e-21 105.5 97 47.4
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 2.5e-21 105.5 95 49.5
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 3.2e-21 105.1 87 51.7
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 1.2e-20 103.2 92 46.7
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 1.6e-20 102.8 99 47.5
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 1.6e-20 102.8 103 44.7
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 1.6e-20 102.8 95 46.3
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 1.6e-20 102.8 95 47.4
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 2.1e-20 102.4 98 48.0
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 2.1e-20 102.4 99 47.5
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 2.1e-20 102.4 97 45.4
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 2.1e-20 102.4 103 44.7
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 3.6e-20 101.7 97 47.4
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 3.6e-20 101.7 103 44.7
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 4.7e-20 101.3 97 42.3
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 4.7e-20 101.3 99 45.5
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 4.7e-20 101.3 97 44.3
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 6.1e-20 100.9 95 47.4
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 1.4e-19 99.8 97 45.4
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 1.4e-19 99.8 93 46.2
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 1.4e-19 99.8 99 44.4
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 2.3e-19 99.0 103 45.6
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 2.3e-19 99.0 103 43.7
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.0e-19 98.6 98 46.9
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 3.0e-19 98.6 99 45.5
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 4.0e-19 98.2 97 45.4
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 4.0e-19 98.2 100 43.0
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 4.0e-19 98.2 103 40.8
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 5.2e-19 97.8 97 44.3
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 5.2e-19 97.8 103 41.7
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 8.8e-19 97.1 91 47.3
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 1.2e-18 96.7 99 44.4
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 1.5e-18 96.3 77 53.2
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 2.0e-18 95.9 92 45.7
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 5.7e-18 94.4 74 51.4
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 5.7e-18 94.4 92 44.6
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 5.7e-18 94.4 94 44.7
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 7.5e-18 94.0 93 48.4
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 7.5e-18 94.0 91 42.9
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 9.8e-18 93.6 95 43.2
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 1.7e-17 92.8 98 45.9
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 2.2e-17 92.4 97 39.2
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 4.8e-17 91.3 74 52.7
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 4.8e-17 91.3 79 49.4
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 6.3e-17 90.9 94 42.6
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 1.1e-16 90.1 100 38.0
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 1.4e-16 89.7 87 47.1
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 1.4e-16 89.7 93 43.0
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 1.4e-16 89.7 95 41.1
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 3.1e-16 88.6 95 38.9
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 7.0e-16 87.4 81 46.9
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 9.1e-16 87.0 74 50.0
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 9.1e-16 87.0 74 50.0
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 9.1e-16 87.0 74 50.0
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 9.1e-16 87.0 74 48.6
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 1.2e-15 86.7 74 50.0
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 1.2e-15 86.7 74 48.6
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 1.2e-15 86.7 94 40.4
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 1.6e-15 86.3 101 42.6
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 1.6e-15 86.3 74 48.6
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 1.6e-15 86.3 78 47.4
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 1.6e-15 86.3 78 47.4
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 1.6e-15 86.3 78 47.4
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 1.6e-15 86.3 78 47.4
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 1.6e-15 86.3 78 47.4
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 2.0e-15 85.9 74 50.0
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 2.7e-15 85.5 103 35.9
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 2.7e-15 85.5 103 35.9
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 2.7e-15 85.5 98 39.8
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 4.5e-15 84.7 74 48.6
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 4.5e-15 84.7 103 35.9
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 4.5e-15 84.7 74 48.6
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 4.5e-15 84.7 103 35.9
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 4.5e-15 84.7 74 50.0
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 4.5e-15 84.7 96 39.6
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 7.7e-15 84.0 98 39.8
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 1.0e-14 83.6 77 48.1
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 1.3e-14 83.2 74 48.6
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 1.3e-14 83.2 74 48.6
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 1.3e-14 83.2 74 48.6
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 2.9e-14 82.0 90 41.1
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 3.8e-14 81.6 79 43.0
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 6.5e-14 80.9 93 37.6
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 8.5e-14 80.5 92 37.0
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 1.1e-13 80.1 92 37.0
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 3.2e-13 78.6 79 44.3
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 4.2e-13 78.2 96 34.4
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 4.2e-13 78.2 96 34.4
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 5.5e-13 77.8 92 34.8
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 5.5e-13 77.8 96 34.4
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 5.5e-13 77.8 96 34.4
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 7.2e-13 77.4 92 32.6
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 1.2e-12 76.6 92 34.8
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 1.2e-12 76.6 78 43.6
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 1.0e-11 73.6 51 56.9
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 5.7e-10 67.8 88 43.2
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 5.7e-10 67.8 88 43.2
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 2.2e-09 65.9 83 33.7
TWI38G0794 Tripterygium wilfordii HOM05D001848 ORTHO05D001295 2.7e-07 58.9 63 39.7


User provided reference genes

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