Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 4.7e-55 217.6 110 100.0
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 2.6e-37 158.7 120 71.7
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 3.1e-30 135.2 120 62.5
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 2.0e-29 132.5 122 61.5
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 1.2e-26 123.2 118 58.5
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.2e-23 113.2 71 77.5
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.2e-23 113.2 71 77.5
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.2e-23 113.2 94 62.8
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.6e-23 112.8 94 61.7
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 2.1e-23 112.5 71 77.5
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 2.8e-23 112.1 94 61.7
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 4.7e-23 111.3 114 54.4
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 4.7e-23 111.3 94 61.7
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 6.2e-23 110.9 80 68.8
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 8.1e-23 110.5 92 60.9
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 8.1e-23 110.5 92 60.9
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 8.1e-23 110.5 70 75.7
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 1.4e-22 109.8 109 54.1
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.4e-22 109.0 100 59.0
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 2.4e-22 109.0 70 77.1
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 2.4e-22 109.0 106 56.6
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.1e-22 108.6 94 60.6
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 4.0e-22 108.2 79 67.1
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 4.0e-22 108.2 98 53.1
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 4.0e-22 108.2 101 56.4
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 5.2e-22 107.8 72 70.8
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 6.8e-22 107.5 85 62.4
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 6.8e-22 107.5 100 59.0
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 8.9e-22 107.1 76 65.8
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 8.9e-22 107.1 75 70.7
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.2e-21 106.7 81 61.7
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.2e-21 106.7 81 61.7
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.2e-21 106.7 76 65.8
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 1.5e-21 106.3 71 71.8
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 1.5e-21 106.3 70 72.9
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 2.0e-21 105.9 71 73.2
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 2.0e-21 105.9 81 61.7
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 2.6e-21 105.5 81 61.7
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.6e-21 105.5 76 65.8
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 2.6e-21 105.5 92 58.7
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 3.4e-21 105.1 71 71.8
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 3.4e-21 105.1 71 71.8
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 3.4e-21 105.1 121 48.8
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 3.4e-21 105.1 127 49.6
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 3.4e-21 105.1 67 73.1
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 4.4e-21 104.8 77 63.6
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 4.4e-21 104.8 113 47.8
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 4.4e-21 104.8 81 61.7
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 4.4e-21 104.8 77 63.6
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 4.4e-21 104.8 103 57.3
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 4.4e-21 104.8 122 48.4
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 4.4e-21 104.8 71 71.8
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 5.8e-21 104.4 79 65.8
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 5.8e-21 104.4 77 63.6
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 5.8e-21 104.4 77 63.6
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 7.6e-21 104.0 79 64.6
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 7.6e-21 104.0 79 64.6
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 7.6e-21 104.0 94 58.5
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 7.6e-21 104.0 71 70.4
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 7.6e-21 104.0 71 67.6
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 9.9e-21 103.6 79 63.3
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 9.9e-21 103.6 70 70.0
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 9.9e-21 103.6 96 54.2
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 1.3e-20 103.2 81 61.7
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.3e-20 103.2 71 69.0
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 1.3e-20 103.2 66 74.2
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.3e-20 103.2 85 62.4
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 1.7e-20 102.8 63 77.8
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 1.7e-20 102.8 110 52.7
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 1.7e-20 102.8 76 65.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 2.2e-20 102.4 83 62.7
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 2.9e-20 102.1 70 70.0
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 2.9e-20 102.1 71 66.2
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 2.9e-20 102.1 71 66.2
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 2.9e-20 102.1 82 61.0
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 4.9e-20 101.3 106 51.9
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 8.4e-20 100.5 80 61.2
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 8.4e-20 100.5 72 65.3
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 8.4e-20 100.5 99 53.5
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 1.9e-19 99.4 112 49.1
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 1.9e-19 99.4 77 62.3
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 1.9e-19 99.4 72 63.9
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 1.9e-19 99.4 72 63.9
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 1.9e-19 99.4 72 63.9
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 3.2e-19 98.6 65 70.8
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 5.4e-19 97.8 70 65.7
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 7.1e-19 97.4 65 70.8
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.6e-18 96.3 76 63.2
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 4.6e-18 94.7 91 57.1
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 4.6e-18 94.7 66 71.2
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 6.0e-18 94.4 76 61.8
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 6.0e-18 94.4 66 68.2
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 6.0e-18 94.4 66 68.2
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 2.3e-17 92.4 81 55.6
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 8.7e-17 90.5 66 71.2
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 2.1e-15 85.9 110 46.4
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 3.6e-15 85.1 66 60.6
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 6.9e-14 80.9 71 50.7
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 6.9e-14 80.9 79 54.4
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.5e-13 79.7 65 55.4
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.4e-13 78.6 51 70.6
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 3.4e-13 78.6 66 53.0
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 2.2e-12 75.9 102 46.1
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 3.8e-12 75.1 73 47.9
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 1.1e-11 73.6 63 50.8
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 9.6e-08 60.5 42 71.4
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.4e-06 56.6 41 70.7
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 9.0e-06 53.9 40 62.5


User provided reference genes

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