Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.6e-62 243.0 126 100.0
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 6.5e-59 231.1 126 93.7
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 1.9e-58 229.6 126 92.9
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 1.9e-55 219.5 121 92.6
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 2.5e-55 219.2 120 92.5
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 5.9e-44 181.4 129 79.1
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 2.2e-43 179.5 129 78.3
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 2.2e-43 179.5 127 78.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.9e-42 176.4 131 74.0
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 7.2e-42 174.5 134 72.4
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.2e-41 173.7 131 74.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.6e-41 173.3 130 72.3
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.6e-41 173.3 131 74.0
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.6e-41 173.3 134 72.4
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 6.1e-41 171.4 127 75.6
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.4e-40 170.2 129 73.6
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.4e-40 170.2 129 73.6
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 1.8e-40 169.9 126 76.2
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 6.7e-40 167.9 132 70.5
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 6.7e-40 167.9 130 70.8
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.1e-39 167.2 127 74.0
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.5e-39 166.8 127 74.0
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 3.3e-39 165.6 128 73.4
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 9.7e-39 164.1 129 69.8
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 1.3e-38 163.7 137 67.2
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.2e-38 162.9 130 69.2
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.8e-38 162.5 116 75.9
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.8e-38 162.5 132 68.2
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.7e-38 162.2 122 74.6
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 4.8e-38 161.8 121 73.6
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 6.3e-38 161.4 131 69.5
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 6.3e-38 161.4 123 72.4
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 8.2e-38 161.0 138 65.2
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.8e-37 159.8 116 75.0
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.8e-37 159.8 127 68.5
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 3.1e-37 159.1 136 67.6
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 3.1e-37 159.1 132 68.2
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 4.1e-37 158.7 129 69.8
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 6.9e-37 157.9 131 67.2
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 2.0e-36 156.4 137 65.0
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 2.6e-36 156.0 131 67.9
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.6e-36 156.0 122 71.3
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 4.5e-36 155.2 118 71.2
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 4.5e-36 155.2 131 67.2
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 4.5e-36 155.2 130 69.2
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 7.7e-36 154.5 118 72.0
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.0e-35 154.1 123 67.5
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.7e-35 153.3 131 66.4
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.7e-35 153.3 122 70.5
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.7e-35 153.3 132 63.6
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.9e-35 152.5 99 78.8
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.9e-35 152.5 99 78.8
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 3.8e-35 152.1 132 62.9
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 3.8e-35 152.1 116 71.6
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 8.5e-35 151.0 128 67.2
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.9e-34 149.8 93 86.0
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.9e-34 149.8 155 60.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 1.9e-34 149.8 114 72.8
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.5e-34 149.4 111 73.9
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 3.2e-34 149.1 110 73.6
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 3.2e-34 149.1 130 65.4
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.2e-34 149.1 130 65.4
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.2e-34 149.1 130 65.4
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.2e-34 148.7 111 70.3
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 4.2e-34 148.7 125 61.6
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 4.2e-34 148.7 93 84.9
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 5.5e-34 148.3 118 70.3
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 7.2e-34 147.9 127 64.6
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.2e-34 147.9 117 68.4
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 9.4e-34 147.5 131 65.6
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 9.4e-34 147.5 85 85.9
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.2e-33 147.1 129 62.8
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.2e-33 147.1 85 90.6
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.2e-33 147.1 127 65.4
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 2.1e-33 146.4 130 64.6
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 2.7e-33 146.0 111 72.1
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.7e-33 146.0 110 70.9
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 4.7e-33 145.2 128 64.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 6.1e-33 144.8 88 83.0
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 6.1e-33 144.8 128 64.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 6.1e-33 144.8 128 64.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 6.1e-33 144.8 128 64.1
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.4e-32 143.7 109 69.7
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.4e-32 143.7 109 69.7
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.4e-32 143.7 109 69.7
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.8e-32 143.3 134 58.2
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.3e-32 142.9 104 73.1
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 3.0e-32 142.5 86 82.6
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 8.8e-32 141.0 182 50.5
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 8.8e-32 141.0 115 70.4
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.0e-31 139.8 122 64.8
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.0e-31 139.8 124 64.5
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 2.6e-31 139.4 123 64.2
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 4.4e-31 138.7 128 60.9
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 4.4e-31 138.7 128 60.9
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 4.4e-31 138.7 81 86.4
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 9.7e-31 137.5 171 51.5
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.3e-30 137.1 128 61.7
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 2.8e-30 136.0 117 62.4
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 6.3e-30 134.8 118 61.0
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 8.2e-30 134.4 113 67.3
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.8e-29 133.3 115 62.6
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 1.8e-29 133.3 86 79.1
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 4.1e-29 132.1 84 79.8
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.2e-28 130.6 179 48.0
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 2.0e-28 129.8 117 59.0
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.6e-28 129.4 82 81.7
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 2.9e-27 125.9 109 62.4
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 3.8e-27 125.6 131 60.3
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.5e-26 123.6 89 73.0
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 9.4e-26 120.9 146 52.1
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 1.6e-25 120.2 70 85.7
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 2.7e-25 119.4 110 62.7
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 5.2e-24 115.2 76 78.9
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 8.8e-24 114.4 114 59.6
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 8.8e-24 114.4 100 65.0
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 2.6e-23 112.8 111 56.8
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 1.1e-21 107.5 71 76.1
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.0e-20 103.2 108 54.6
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 5.9e-20 101.7 90 62.2
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.2e-19 99.8 250 34.4
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 7.5e-15 84.7 93 57.0
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 7.5e-15 84.7 90 55.6
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 9.8e-15 84.3 79 60.8
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 3.7e-14 82.4 80 56.2
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 9.1e-13 77.8 45 88.9
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 2.0e-12 76.6 108 47.2
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 7.7e-12 74.7 71 63.4
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.1e-10 70.9 42 78.6
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 1.2e-07 60.8 42 69.0
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 9.8e-07 57.8 97 38.1
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.8e-06 56.2 79 44.3


User provided reference genes

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