Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001660 Sechium edule HOM05D001640 ORTHO05D001612 1.0e-154 550.1 288 100.0
ClCG04G012630 Citrullus lanatus HOM05D001640 ORTHO05D001612 2.4e-95 352.8 297 67.0
MELO3C001944.2 Cucumis melo HOM05D001640 ORTHO05D001612 1.1e-87 327.4 295 63.7
CsaV3_1G005070 Cucumis sativus L. HOM05D001640 ORTHO05D001612 2.9e-80 302.8 295 60.0
Sed0007726 Sechium edule HOM05D001640 ORTHO05D001612 2.8e-38 163.3 260 47.3
CiPaw.15G093800 Carya illinoinensis HOM05D001640 ORTHO05D001612 1.2e-36 157.9 313 39.0
Manes.03G067600 Manihot esculenta HOM05D001640 ORTHO05D001612 1.5e-31 141.0 294 37.1
Sabra12G0025500 Salix brachista HOM05D001640 ORTHO05D001612 2.8e-30 136.7 317 34.7
Haze_18384 Corylus avellana HOM05D001640 ORTHO05D001612 1.8e-29 134.0 321 34.3
Ciclev10021576m.g Citrus clementina HOM05D001640 ORTHO05D001612 5.2e-29 132.5 290 36.6
Cfa017826 Carpinus fangiana HOM05D001640 ORTHO05D001612 8.9e-29 131.7 318 35.5
Potri.015G028700 Populus trichocarpa HOM05D001640 ORTHO05D001612 1.7e-27 127.5 325 32.9
RcHm_v2.0_Chr7g0177291 Rosa chinensis HOM05D001640 ORTHO05D001612 3.7e-27 126.3 345 33.6
FAN18G3015 Fragaria x ananassa HOM05D001640 ORTHO05D001612 1.1e-26 124.8 346 32.7
FvH4_5g18290 Fragaria vesca HOM05D001640 ORTHO05D001612 2.4e-26 123.6 346 32.7
MD06G1238700 Malus domestica HOM05D001640 ORTHO05D001612 2.4e-26 123.6 342 33.9
MBI03_g13831_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 2.0e-25 120.6 278 36.3
Sabra15G0023900 Salix brachista HOM05D001640 ORTHO05D001612 5.9e-25 119.0 322 33.2
Potri.012G037001 Populus trichocarpa HOM05D001640 ORTHO05D001612 2.3e-24 117.1 287 35.2
Cpa.g.sc111.33 Carica papaya HOM05D001640 ORTHO05D001612 5.0e-24 115.9 294 32.3
Medtr6g080650 Medicago truncatula HOM05D001640 ORTHO05D001612 1.5e-23 114.4 331 32.6
TWI15G0707 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 1.5e-23 114.4 280 33.9
TAR629G3218 Trochodendron aralioides HOM05D001640 ORTHO05D001612 1.5e-23 114.4 328 35.1
VMungo0464G0664 Vigna mungo HOM05D001640 ORTHO05D001612 1.5e-23 114.4 299 34.8
TAR371G1285 Trochodendron aralioides HOM05D001640 ORTHO05D001612 7.3e-23 112.1 280 36.1
Phvul.004G141400 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 2.1e-22 110.5 302 33.4
Lj2g0021861 Lotus japonicus HOM05D001640 ORTHO05D001612 4.7e-22 109.4 305 33.4
MD14G1244900 Malus domestica HOM05D001640 ORTHO05D001612 6.2e-22 109.0 367 31.9
Glyma.09G165900 Glycine max HOM05D001640 ORTHO05D001612 2.3e-21 107.1 294 32.7
arahy.Tifrunner.gnm1.ann1.DQYB4L Arachis hypogaea HOM05D001640 ORTHO05D001612 3.1e-21 106.7 326 32.8
Psat1g121240 Pisum sativum HOM05D001640 ORTHO05D001612 4.0e-21 106.3 322 32.0
arahy.Tifrunner.gnm1.ann1.WL96AD Arachis hypogaea HOM05D001640 ORTHO05D001612 5.2e-21 105.9 325 32.9
TPR.G2580 Trifolium pratense HOM05D001640 ORTHO05D001612 8.9e-21 105.1 277 34.3
Glyma.16G215800 Glycine max HOM05D001640 ORTHO05D001612 1.2e-20 104.8 300 33.7
TWI81G0059 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 2.0e-20 104.0 297 32.3
TPR.G19885 Trifolium pratense HOM05D001640 ORTHO05D001612 2.6e-20 103.6 313 31.6
TPR.G24074 Trifolium pratense HOM05D001640 ORTHO05D001612 2.6e-20 103.6 310 32.6
Eucgr.K02310 Eucalyptus grandis HOM05D001640 ORTHO05D001612 5.8e-20 102.4 310 31.6
FAN08G0482 Fragaria x ananassa HOM05D001640 ORTHO05D001612 1.7e-19 100.9 350 30.3
Nn3g18595 Nelumbo nucifera HOM05D001640 ORTHO05D001612 2.9e-19 100.1 328 31.4
Medtr6g080600 Medicago truncatula HOM05D001640 ORTHO05D001612 3.7e-19 99.8 331 32.0
PSO782G0998 Papaver somniferum HOM05D001640 ORTHO05D001612 4.9e-19 99.4 334 31.1
FAN13G2451 Fragaria x ananassa HOM05D001640 ORTHO05D001612 4.1e-18 96.3 350 29.7
MBI06_g27494_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 5.4e-18 95.9 296 32.8
FAN04G0889 Fragaria x ananassa HOM05D001640 ORTHO05D001612 6.0e-17 92.4 344 28.8
Manes.16G063300 Manihot esculenta HOM05D001640 ORTHO05D001612 6.0e-17 92.4 301 32.2
Oeu016050.1 Olea europaea HOM05D001640 ORTHO05D012345 1.3e-16 91.3 320 30.9
PSO063G6251 Papaver somniferum HOM05D001640 ORTHO05D001612 2.3e-16 90.5 326 30.4
ATR0618G424 Amborella trichopoda HOM05D001640 ORTHO05D001612 3.9e-16 89.7 327 30.6
CANSAT64G1354 Cannabis sativa HOM05D001640 ORTHO05D001612 8.6e-16 88.6 310 31.9
Prupe.5G242600 Prunus persica HOM05D001640 ORTHO05D001612 5.6e-15 85.9 373 27.6
Nn4g25128 Nelumbo nucifera HOM05D001640 ORTHO05D001612 7.3e-15 85.5 326 28.5
DCAR_014747 Daucus carota HOM05D001640 ORTHO05D001612 2.1e-14 84.0 339 29.8
Haze_09527 Corylus avellana HOM05D001640 ORTHO05D001612 1.1e-13 81.6 305 26.6
PGR044G1368 Punica granatum HOM05D001640 ORTHO05D001612 3.1e-13 80.1 309 26.5
Oeu034432.1 Olea europaea HOM05D010719 ORTHO05D012345 1.2e-12 78.2 330 30.3
CsaV3_3G005980 Cucumis sativus L. HOM05D001640 ORTHO05D001612 5.8e-12 75.9 327 27.2
SGA_v2.0_scaffold73G24316 Striga asiatica HOM05D001640 ORTHO05D001612 5.8e-12 75.9 326 27.9
Lalb_Chr14g0370311 Lupinus albus HOM05D001640 ORTHO05D001612 1.3e-11 74.7 158 38.6
QL08p018071 Quercus lobata HOM05D001640 ORTHO05D001612 1.7e-11 74.3 305 27.5
GSVIVG01006712001 Vitis vinifera HOM05D001640 ORTHO05D001612 3.7e-11 73.2 288 29.5
ATR0693G217 Amborella trichopoda HOM05D001640 ORTHO05D001612 4.9e-11 72.8 312 27.6
Migut.D02062 Erythranthe guttata HOM05D001640 ORTHO05D001612 4.9e-11 72.8 281 30.2
ClCG11G018460 Citrullus lanatus HOM05D001640 ORTHO05D001612 1.4e-10 71.2 313 24.9
Cfa020506 Carpinus fangiana HOM05D001640 ORTHO05D001612 1.9e-10 70.9 310 26.5
CDE02G2367 Ceratophyllum demersum HOM05D001640 ORTHO05D001612 1.9e-10 70.9 292 26.0
Glyma.13G245600 Glycine max HOM05D001640 ORTHO05D001612 1.9e-10 70.9 261 28.0
TWI39G0097 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 4.1e-10 69.7 316 26.6
Lj1A852G44 Lonicera japonica HOM05D001640 ORTHO05D001612 5.4e-10 69.3 309 25.9
TAR626G0635 Trochodendron aralioides HOM05D001640 ORTHO05D001612 7.1e-10 68.9 325 24.9
CDE05G0634 Ceratophyllum demersum HOM05D001640 ORTHO05D001612 1.2e-09 68.2 269 28.3
Duzib192G0891 Durio zibethinus HOM05D001640 ORTHO05D001612 2.7e-09 67.0 311 28.0
VMungo0540G1672 Vigna mungo HOM05D001640 ORTHO05D001612 4.6e-09 66.2 234 30.8
DCAR_023250 Daucus carota HOM05D001640 ORTHO05D001612 6.0e-09 65.9 99 41.4
Lj2A282T46 Lonicera japonica HOM05D001640 ORTHO05D001612 1.0e-08 65.1 276 25.7
vmacro03829 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 1.3e-08 64.7 312 25.6
vmacro23296 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 1.3e-08 64.7 312 25.6
Ciclev10008953m.g Citrus clementina HOM05D001640 ORTHO05D001612 2.3e-08 63.9 304 23.7
Lj1A1212G53 Lonicera japonica HOM05D001640 ORTHO05D001612 2.3e-08 63.9 299 28.8
Actinidia05587 Actinidia chinensis HOM05D001640 ORTHO05D001612 3.0e-08 63.5 279 27.2
CiPaw.12G122700 Carya illinoinensis HOM05D001640 ORTHO05D001612 3.0e-08 63.5 308 26.0
Ciclev10016038m.g Citrus clementina HOM05D001640 ORTHO05D001612 3.0e-08 63.5 291 25.8
Sabra11G0110500 Salix brachista HOM05D001640 ORTHO05D001612 5.1e-08 62.8 340 25.3
Duzib213G0072 Durio zibethinus HOM05D001640 ORTHO05D001612 6.6e-08 62.4 299 23.7
Peaxi162Scf00137g01111 Petunia axillaris HOM05D001640 ORTHO05D001612 8.6e-08 62.0 275 27.6
PGR004G0488 Punica granatum HOM05D001640 ORTHO05D001612 8.6e-08 62.0 312 26.0
Rhsim13G0174000 Rhododendron simsii HOM05D001640 ORTHO05D001612 8.6e-08 62.0 313 25.2
arahy.Tifrunner.gnm1.ann1.A0V2WM Arachis hypogaea HOM05D001640 ORTHO05D001612 1.1e-07 61.6 252 29.4
PSO832G3211 Papaver somniferum HOM05D001640 ORTHO05D001612 1.1e-07 61.6 366 24.3
Thecc.06G197500 Theobroma cacao HOM05D001640 ORTHO05D001612 1.1e-07 61.6 325 28.0
arahy.Tifrunner.gnm1.ann1.C6SH89 Arachis hypogaea HOM05D001640 ORTHO05D001612 1.5e-07 61.2 317 25.9
arahy.Tifrunner.gnm1.ann1.R6F5YK Arachis hypogaea HOM05D001640 ORTHO05D001612 1.9e-07 60.8 252 29.4
Gohir.A05G164700 Gossypium hirsutum HOM05D001640 ORTHO05D001612 1.9e-07 60.8 321 25.2
Phvul.005G086300 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 1.9e-07 60.8 321 24.6
CDE05G2037 Ceratophyllum demersum HOM05D001640 ORTHO05D001612 2.5e-07 60.5 267 27.3
Gohir.D01G055700 Gossypium hirsutum HOM05D001640 ORTHO05D001612 2.5e-07 60.5 296 26.0
Lj6g0007106 Lotus japonicus HOM05D001640 ORTHO05D001612 2.5e-07 60.5 256 26.6
Cpa.g.sc80.113 Carica papaya HOM05D001640 ORTHO05D001612 3.3e-07 60.1 315 24.1
CiPaw.11G176400 Carya illinoinensis HOM05D001640 ORTHO05D001612 3.3e-07 60.1 314 24.8
CDE01G0075 Ceratophyllum demersum HOM05D001640 ORTHO05D001612 3.3e-07 60.1 295 24.4
FAN21G3887 Fragaria x ananassa HOM05D001640 ORTHO05D001612 4.3e-07 59.7 328 25.3
Gorai.002G075800 Gossypium raimondii HOM05D001640 ORTHO05D001612 4.3e-07 59.7 297 26.9
Lalb_Chr22g0353911 Lupinus albus HOM05D001640 ORTHO05D001612 4.3e-07 59.7 181 32.0
TWI38G2165 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 4.3e-07 59.7 320 25.9
FAN16G1307 Fragaria x ananassa HOM05D001640 ORTHO05D001612 5.6e-07 59.3 326 24.2
Lalb_Chr24g0398511 Lupinus albus HOM05D001640 ORTHO05D001612 5.6e-07 59.3 103 38.8
arahy.Tifrunner.gnm1.ann1.CWT1SW Arachis hypogaea HOM05D001640 ORTHO05D001612 7.3e-07 58.9 317 25.9
Nitab4.5_0003465g0080 Nicotiana tabacum HOM05D001640 ORTHO05D001612 7.3e-07 58.9 297 27.3
Potri.001G406600 Populus trichocarpa HOM05D001640 ORTHO05D001612 7.3e-07 58.9 305 25.6
A01p30130 Brassica napus HOM05D001640 ORTHO05D001612 1.2e-06 58.2 261 26.4
Phvul.006G191200 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 1.2e-06 58.2 230 27.8
Thecc.07G071500 Theobroma cacao HOM05D001640 ORTHO05D001612 2.1e-06 57.4 303 25.4
Ca_00268_v3 Cicer arietinum L. HOM05D001640 ORTHO05D001612 2.8e-06 57.0 248 27.8
Manes.15G083300 Manihot esculenta HOM05D001640 ORTHO05D001612 2.8e-06 57.0 332 24.1
TWI38G0775 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 2.8e-06 57.0 311 24.8
MELO3C016552.2 Cucumis melo HOM05D001640 ORTHO05D001612 3.6e-06 56.6 273 23.4
Gohir.A01G068400 Gossypium hirsutum HOM05D001640 ORTHO05D001612 3.6e-06 56.6 299 25.8
Dinv08340 Davidia involucrata HOM05D001640 ORTHO05D001612 4.7e-06 56.2 318 23.0
Oeu053930.1 Olea europaea HOM05D001640 ORTHO05D001612 4.7e-06 56.2 330 24.5
Cfa000364 Carpinus fangiana HOM05D001640 ORTHO05D001612 6.2e-06 55.8 291 26.5
RcHm_v2.0_Chr5g0035351 Rosa chinensis HOM05D001640 ORTHO05D001612 6.2e-06 55.8 328 25.0
Nn3g16445 Nelumbo nucifera HOM05D001640 ORTHO05D001612 8.1e-06 55.5 90 40.0


User provided reference genes

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