Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 5.1e-122 441.0 217 100.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.8e-83 312.4 195 79.5
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.3e-80 303.5 201 77.1
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 1.2e-78 297.0 184 81.0
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 3.4e-65 252.3 198 66.7
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 4.9e-64 248.4 195 64.6
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 4.1e-63 245.4 196 65.3
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.2e-62 243.8 195 68.2
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.6e-62 243.4 200 65.0
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.7e-62 242.7 204 64.7
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 3.5e-62 242.3 195 66.7
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 6.0e-62 241.5 199 66.3
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 7.8e-62 241.1 204 63.7
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.3e-61 240.4 200 65.0
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.7e-61 240.0 201 65.2
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 3.9e-61 238.8 201 64.7
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.6e-61 238.0 201 63.7
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 6.6e-61 238.0 200 64.0
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.5e-60 236.9 200 63.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 4.7e-59 231.9 198 62.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 1.1e-58 230.7 199 61.8
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 1.8e-58 229.9 196 62.2
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 2.4e-58 229.6 198 62.6
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.4e-58 229.6 195 63.6
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.1e-58 229.2 225 57.8
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 4.0e-58 228.8 196 63.3
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.0e-58 228.8 197 61.9
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 6.9e-58 228.0 198 62.1
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 6.9e-58 228.0 197 61.4
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 8.9e-58 227.6 200 60.0
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.2e-57 227.3 196 60.7
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.5e-57 226.9 198 57.6
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 2.6e-57 226.1 200 59.0
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 4.4e-57 225.3 200 59.0
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 4.4e-57 225.3 205 61.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 9.9e-57 224.2 200 59.0
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 4.9e-56 221.9 193 63.7
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 6.4e-56 221.5 196 59.7
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.1e-55 220.7 202 59.4
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.4e-55 220.3 195 59.5
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.4e-55 220.3 138 73.2
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.9e-55 219.9 204 57.4
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.4e-55 219.5 214 57.0
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 2.4e-55 219.5 197 60.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.4e-55 219.5 204 57.4
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.2e-55 218.8 195 61.5
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 4.2e-55 218.8 197 58.4
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 9.3e-55 217.6 201 58.7
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 9.3e-55 217.6 185 61.6
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 2.7e-54 216.1 180 61.7
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.7e-54 216.1 175 62.3
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.7e-54 216.1 192 61.5
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.7e-54 216.1 202 59.9
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 2.7e-54 216.1 196 59.2
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 4.6e-54 215.3 195 57.4
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 4.6e-54 215.3 195 56.4
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 7.8e-54 214.5 200 59.5
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.3e-53 213.8 158 63.9
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.0e-53 212.6 200 59.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.9e-53 212.2 139 70.5
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 5.1e-53 211.8 200 59.5
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 5.1e-53 211.8 194 59.3
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 6.6e-53 211.5 201 57.2
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.1e-52 210.7 139 69.8
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.1e-52 210.7 139 70.5
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.3e-52 208.8 189 57.1
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.3e-52 208.8 189 57.1
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 5.6e-52 208.4 197 56.3
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.3e-51 207.2 144 68.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.6e-51 206.8 223 54.3
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 4.8e-51 205.3 191 56.5
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 1.4e-50 203.8 204 55.9
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 1.8e-50 203.4 205 53.7
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 2.4e-50 203.0 196 54.6
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 3.1e-50 202.6 197 56.9
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 3.1e-50 202.6 190 57.4
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 3.1e-50 202.6 182 61.5
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 4.0e-50 202.2 179 60.9
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.3e-50 201.8 246 49.2
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 5.3e-50 201.8 191 56.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 5.3e-50 201.8 197 55.8
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 6.9e-50 201.4 191 56.5
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 9.0e-50 201.1 191 55.5
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 9.0e-50 201.1 191 56.0
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 1.2e-49 200.7 198 55.6
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.2e-49 200.7 135 67.4
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.2e-49 200.7 189 56.1
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.5e-49 200.3 191 56.0
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.5e-49 200.3 197 56.3
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.0e-49 199.9 139 65.5
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 4.5e-49 198.7 197 55.8
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 5.8e-49 198.4 196 54.1
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 7.6e-49 198.0 125 70.4
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.7e-48 196.8 171 61.4
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 2.9e-48 196.1 125 71.2
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 7.1e-47 191.4 181 55.2
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.1e-46 189.9 139 66.9
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.8e-45 186.8 111 75.7
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.5e-44 183.7 195 56.4
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.9e-44 183.3 154 68.2
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 2.5e-44 183.0 116 72.4
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 7.4e-44 181.4 127 66.9
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.1e-43 179.9 217 48.8
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 2.1e-43 179.9 226 48.2
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 3.6e-43 179.1 116 72.4
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 6.2e-43 178.3 112 75.0
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.4e-42 177.2 120 70.0
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 3.1e-42 176.0 134 59.7
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 7.6e-41 171.4 155 60.0
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 9.9e-41 171.0 155 60.0
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.6e-38 163.7 126 61.1
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 2.7e-38 162.9 115 67.0
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 3.9e-37 159.1 123 58.5
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 8.7e-37 157.9 165 57.0
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 5.6e-36 155.2 122 62.3
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 5.6e-36 155.2 154 55.8
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.3e-35 154.1 109 65.1
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 2.1e-35 153.3 91 74.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 4.0e-34 149.1 151 59.6
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 4.9e-32 142.1 93 69.9
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 8.4e-32 141.4 109 62.4
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 5.7e-28 128.6 131 48.1
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.8e-26 123.6 120 55.0
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.5e-25 120.6 73 74.0
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 2.2e-24 116.7 116 48.3
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 6.1e-22 108.6 122 54.9
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.0e-21 107.8 111 46.8
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.5e-20 104.0 140 49.3
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.5e-20 103.2 95 49.5
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 2.5e-20 103.2 153 47.7
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 2.7e-14 83.2 108 40.7
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 7.9e-14 81.6 113 46.0
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 8.5e-08 61.6 62 51.6
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 3.2e-07 59.7 42 64.3
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 2.1e-06 57.0 43 58.1
Mapoly0009s0209 Marchantia polymorpha HOM05D004127 ORTHO05D043990 2.7e-06 56.6 119 31.9


User provided reference genes

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