Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001567 Sechium edule HOM05D007824 ORTHO05D009875 5.5e-22 106.7 52 100.0
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 7.5e-19 96.3 52 88.5
Sed0025799 Sechium edule HOM05D007824 ORTHO05D009875 3.7e-18 94.0 52 80.8
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 8.5e-15 82.8 52 75.0
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 2.5e-14 81.3 52 71.2
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 3.2e-14 80.9 52 76.9
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 4.2e-14 80.5 52 75.0
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 4.2e-14 80.5 52 71.2
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 5.5e-14 80.1 52 71.2
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 7.2e-14 79.7 52 71.2
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 2.1e-13 78.2 54 72.2
Migut.E01438 Erythranthe guttata HOM05D007824 ORTHO05D009875 2.7e-13 77.8 52 67.3
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 1.4e-12 75.5 54 72.2
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 1.8e-12 75.1 52 71.2
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 2.3e-12 74.7 52 69.2
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 3.0e-12 74.3 45 75.6
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 3.0e-12 74.3 52 65.4
Gohir.A05G062100 Gossypium hirsutum HOM05D007824 ORTHO05D009875 3.0e-12 74.3 52 67.3
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 4.0e-12 73.9 53 69.8
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 4.0e-12 73.9 52 65.4
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 5.2e-12 73.6 53 67.9
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 6.8e-12 73.2 52 69.2
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 6.8e-12 73.2 52 69.2
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 6.8e-12 73.2 53 69.8
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.2e-11 72.4 52 65.4
Gorai.009G065300 Gossypium raimondii HOM05D007824 ORTHO05D009875 1.2e-11 72.4 52 63.5
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 1.5e-11 72.0 55 69.1
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 2.0e-11 71.6 52 61.5
Gohir.D05G064600 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.0e-11 71.6 52 63.5
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 2.0e-11 71.6 52 63.5
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 2.6e-11 71.2 53 66.0
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 67.3
Glyma.06G059900 Glycine max HOM05D007824 ORTHO05D009875 3.4e-11 70.9 53 66.0
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 63.5
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 59.6
MD08G1050300 Malus domestica HOM05D007824 ORTHO05D009875 7.5e-11 69.7 54 64.8
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 9.8e-11 69.3 42 76.2
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.3e-10 68.9 51 66.7
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.7e-10 68.6 52 65.4
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.7e-10 68.6 52 63.5
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.2e-10 68.2 52 65.4
Oeu006856.1 Olea europaea HOM05D007824 ORTHO05D009875 2.2e-10 68.2 50 64.0
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 2.2e-10 68.2 52 61.5
Atru.chr7.2598 Acer truncatum HOM05D007824 ORTHO05D009875 3.7e-10 67.4 55 60.0
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 8.3e-10 66.2 52 61.5
Medtr3g105765 Medicago truncatula HOM05D007824 ORTHO05D009875 2.4e-09 64.7 53 62.3
arahy.Tifrunner.gnm1.ann1.58R7DF Arachis hypogaea HOM05D007824 ORTHO05D009875 7.0e-09 63.2 35 80.0
arahy.Tifrunner.gnm1.ann1.A82CWH Arachis hypogaea HOM05D007824 ORTHO05D009875 7.0e-09 63.2 35 80.0
MD15G1044500 Malus domestica HOM05D007824 ORTHO05D009875 9.1e-09 62.8 49 61.2
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 1.2e-08 62.4 52 59.6
Zm00001eb221680 Zea mays HOM05D007824 ORTHO05D009875 1.6e-08 62.0 48 64.6
CARHR202570 Cardamine hirsuta HOM05D007824 ORTHO05D009875 2.7e-08 61.2 52 59.6
Thhalv10015471m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 2.7e-08 61.2 52 59.6
Glyma.17G221200 Glycine max HOM05D007824 ORTHO05D009875 2.7e-08 61.2 45 62.2
Glyma.14G104600 Glycine max HOM05D007824 ORTHO05D009875 1.7e-07 58.5 39 66.7
Os10g0478900 Oryza sativa ssp. japonica HOM05D007824 ORTHO05D009875 1.7e-07 58.5 44 68.2
Solyc08g068930.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 8.5e-07 56.2 36 75.0
DCAR_000681 Daucus carota HOM05D007824 ORTHO05D009875 1.9e-06 55.1 53 54.7
AT5G10745 Arabidopsis thaliana HOM05D007824 ORTHO05D009875 2.5e-06 54.7 54 57.4
BcaB01g06276 Brassica carinata HOM05D007824 ORTHO05D009875 3.2e-06 54.3 54 55.6
Lj5g0022212 Lotus japonicus HOM05D007824 ORTHO05D009875 3.2e-06 54.3 51 56.9
CSS0018794 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 4.2e-06 53.9 34 73.5
BcaB01g05502 Brassica carinata HOM05D007824 ORTHO05D009875 5.5e-06 53.5 54 55.6
A03p04740 Brassica napus HOM05D007824 ORTHO05D009875 5.5e-06 53.5 54 55.6
C03p05450 Brassica napus HOM05D007824 ORTHO05D009875 5.5e-06 53.5 54 55.6
BraA03t09814Z Brassica rapa HOM05D007824 ORTHO05D009875 5.5e-06 53.5 54 55.6
Mapoly0056s0140 Marchantia polymorpha HOM05D007824 ORTHO05D009875 5.5e-06 53.5 49 49.0
AL6G21300 Arabidopsis lyrata HOM05D007824 ORTHO05D009875 7.2e-06 53.1 54 55.6


User provided reference genes

Program Settings