Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 3.4e-148 528.5 299 100.0
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 9.7e-71 271.2 330 56.1
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.2e-60 237.7 309 55.0
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.7e-59 233.8 327 54.4
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 4.3e-42 176.0 337 38.0
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 4.3e-42 176.0 355 37.7
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 4.7e-41 172.6 351 37.3
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 3.4e-39 166.4 344 37.5
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 7.5e-39 165.2 352 40.9
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 7.5e-39 165.2 321 38.6
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 9.8e-39 164.9 370 36.5
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.3e-38 164.5 354 37.3
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 1.3e-38 164.5 348 36.5
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.2e-38 163.7 364 35.4
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.2e-38 163.7 335 37.6
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.9e-38 162.5 365 36.7
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 6.4e-38 162.2 323 36.2
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 8.3e-38 161.8 367 36.8
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 5.4e-37 159.1 375 36.0
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 7.0e-37 158.7 323 38.4
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 9.2e-37 158.3 340 35.6
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 9.2e-37 158.3 346 36.7
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.7e-36 156.8 353 40.5
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.5e-36 156.4 353 40.5
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 4.6e-36 156.0 355 37.7
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 7.8e-36 155.2 341 37.0
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.0e-35 154.8 356 35.7
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 1.3e-35 154.5 297 41.4
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 1.7e-35 154.1 319 38.6
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.7e-35 154.1 382 38.2
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 2.3e-35 153.7 372 34.9
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 3.0e-35 153.3 336 37.8
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 3.9e-35 152.9 336 34.8
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 3.9e-35 152.9 348 36.5
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 5.0e-35 152.5 348 36.5
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 8.6e-35 151.8 311 35.7
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.1e-34 151.4 346 39.9
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 1.1e-34 151.4 348 33.9
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 4.3e-34 149.4 351 35.0
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 5.6e-34 149.1 311 36.0
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 9.5e-34 148.3 383 34.5
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.2e-33 147.9 322 39.4
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.2e-33 147.9 310 35.8
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.6e-33 147.5 353 34.3
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 2.1e-33 147.1 299 39.1
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 2.1e-33 147.1 355 33.8
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 6.2e-33 145.6 345 34.8
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 2.3e-32 143.7 363 32.5
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 3.1e-32 143.3 352 33.2
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 5.2e-32 142.5 330 35.5
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 1.5e-31 141.0 311 43.7
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 5.8e-31 139.0 283 36.4
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 9.8e-31 138.3 269 39.0
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 9.8e-31 138.3 299 37.5
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 9.8e-31 138.3 332 34.0
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 1.3e-30 137.9 276 40.6
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 1.7e-30 137.5 341 36.1
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 2.2e-30 137.1 323 35.9
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 2.2e-30 137.1 313 38.0
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 3.7e-30 136.3 293 39.6
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 4.9e-30 136.0 334 34.7
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 1.9e-29 134.0 334 34.7
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.4e-29 133.7 313 42.2
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 4.1e-29 132.9 281 35.2
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 5.4e-29 132.5 314 34.1
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 9.2e-29 131.7 288 42.0
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 9.2e-29 131.7 318 36.2
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.1e-28 130.6 337 36.8
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 4.6e-28 129.4 335 31.9
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 7.8e-28 128.6 302 34.8
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 1.0e-27 128.3 295 34.9
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 1.3e-27 127.9 279 34.8
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 3.9e-27 126.3 310 34.2
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 3.3e-26 123.2 346 32.7
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 9.5e-26 121.7 299 34.1
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.2e-25 121.3 369 33.9
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.8e-25 120.2 321 32.7
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.4e-23 113.2 276 33.0
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 3.7e-22 109.8 378 30.7
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 3.7e-22 109.8 293 33.4
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 8.3e-22 108.6 280 31.8
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 8.3e-22 108.6 314 31.2
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.9e-21 107.5 330 30.0
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 3.2e-21 106.7 185 36.8
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 4.1e-21 106.3 269 38.7
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 5.4e-21 105.9 295 34.6
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 5.4e-21 105.9 258 40.7
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 9.2e-21 105.1 331 30.2
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 2.1e-20 104.0 273 37.0
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 2.1e-20 104.0 273 37.0
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 2.7e-20 103.6 261 38.3
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 4.6e-20 102.8 361 28.5
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 6.0e-20 102.4 266 42.5
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 7.8e-20 102.1 261 37.9
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 7.8e-20 102.1 271 39.9
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 7.8e-20 102.1 261 37.9
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 7.8e-20 102.1 271 39.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 7.8e-20 102.1 321 29.6
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 1.0e-19 101.7 271 41.0
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 1.7e-19 100.9 261 35.2
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.7e-19 100.9 274 38.7
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.3e-19 100.5 301 31.6
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 3.0e-19 100.1 273 37.7
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 3.9e-19 99.8 267 40.8
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 6.6e-19 99.0 284 37.0
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 8.6e-19 98.6 273 38.8
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 3.3e-18 96.7 253 35.2
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 1.6e-17 94.4 290 33.4
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.6e-17 94.4 275 36.4
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 2.8e-17 93.6 266 38.3
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 2.8e-17 93.6 238 32.8
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 3.6e-17 93.2 122 41.8
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 3.6e-17 93.2 116 41.4
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 6.2e-17 92.4 265 35.1
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 6.2e-17 92.4 248 32.7
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.8e-16 90.9 261 36.0
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 4.0e-16 89.7 276 34.8
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 5.8e-15 85.9 271 34.7
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 5.8e-15 85.9 312 29.5
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 9.9e-15 85.1 228 30.7
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 6.4e-14 82.4 103 40.8
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.1e-13 81.6 264 31.1
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 4.2e-13 79.7 138 42.8
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 5.4e-13 79.3 57 75.4
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 2.1e-12 77.4 53 79.2
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 2.1e-12 77.4 245 29.4
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 3.5e-12 76.6 242 31.4
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 7.8e-12 75.5 236 38.1
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.3e-11 74.7 44 86.4
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 2.3e-11 73.9 41 92.7
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 6.6e-11 72.4 241 36.9
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.5e-10 70.5 255 29.8
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 1.6e-09 67.8 108 38.9
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 3.4e-07 60.1 309 25.9
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 1.7e-06 57.8 39 56.4
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 1.7e-06 57.8 186 27.4
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 4.9e-06 56.2 61 57.4
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 6.4e-06 55.8 50 64.0


User provided reference genes

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