Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 5.4e-63 244.2 128 100.0
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 1.4e-10 70.1 128 45.3
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 3.5e-09 65.5 128 43.0
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 1.7e-08 63.2 128 43.8
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 2.2e-08 62.8 128 43.0
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 2.9e-08 62.4 34 100.0
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 2.9e-08 62.4 34 100.0
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 2.9e-08 62.4 34 100.0
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 2.9e-08 62.4 34 100.0
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 2.9e-08 62.4 34 100.0
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 3.8e-08 62.0 128 41.4
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 5.0e-08 61.6 128 45.3
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 5.0e-08 61.6 63 61.9
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 5.0e-08 61.6 63 61.9
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 5.0e-08 61.6 63 61.9
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 5.0e-08 61.6 63 61.9
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 5.0e-08 61.6 128 43.0
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 5.0e-08 61.6 128 41.4
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 5.0e-08 61.6 128 42.2
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 6.5e-08 61.2 63 61.9
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 6.5e-08 61.2 63 61.9
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 8.5e-08 60.8 128 41.4
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 8.5e-08 60.8 34 94.1
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 8.5e-08 60.8 63 61.9
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 8.5e-08 60.8 64 59.4
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 8.5e-08 60.8 61 63.9
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 8.5e-08 60.8 140 40.7
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 8.5e-08 60.8 128 40.6
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 8.5e-08 60.8 128 40.6
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.5e-07 60.1 34 94.1
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.5e-07 60.1 128 39.1
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.9e-07 59.7 34 94.1
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.9e-07 59.7 128 41.4
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 1.9e-07 59.7 128 41.4
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 2.5e-07 59.3 128 41.4
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.5e-07 59.3 34 91.2
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.5e-07 59.3 63 57.1
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 41.4
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 41.4
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 43.0
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 3.2e-07 58.9 60 61.7
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 43.8
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 41.4
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 41.4
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 3.2e-07 58.9 128 40.6
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 4.2e-07 58.5 128 40.6
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 4.2e-07 58.5 128 39.8
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 4.2e-07 58.5 66 60.6
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 4.2e-07 58.5 34 91.2
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 5.5e-07 58.2 34 91.2
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 5.5e-07 58.2 128 39.1
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 5.5e-07 58.2 128 41.4
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 5.5e-07 58.2 57 64.9
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 5.5e-07 58.2 57 63.2
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 7.2e-07 57.8 34 88.2
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 7.2e-07 57.8 34 88.2
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 7.2e-07 57.8 34 88.2
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 7.2e-07 57.8 34 88.2
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 7.2e-07 57.8 34 91.2
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 7.2e-07 57.8 66 56.1
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 9.4e-07 57.4 63 57.1
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 9.4e-07 57.4 128 39.1
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 9.4e-07 57.4 128 40.6
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 9.4e-07 57.4 128 40.6
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.2e-06 57.0 34 85.3
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.2e-06 57.0 63 57.1
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.2e-06 57.0 64 53.1
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.2e-06 57.0 34 88.2
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 1.2e-06 57.0 34 88.2
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.2e-06 57.0 34 88.2
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.2e-06 57.0 34 88.2
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 1.6e-06 56.6 128 39.8
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 1.6e-06 56.6 128 38.3
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.6e-06 56.6 34 85.3
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.6e-06 56.6 34 85.3
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 2.1e-06 56.2 34 85.3
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 2.1e-06 56.2 126 39.7
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 2.7e-06 55.8 34 85.3
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.7e-06 55.8 63 54.0
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 3.6e-06 55.5 34 85.3
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 3.6e-06 55.5 125 40.0
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 4.7e-06 55.1 128 40.6
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 4.7e-06 55.1 34 85.3
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 6.1e-06 54.7 128 38.3
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 6.1e-06 54.7 32 90.6
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 6.1e-06 54.7 124 40.3
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 6.1e-06 54.7 34 79.4
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 6.1e-06 54.7 72 48.6
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 8.0e-06 54.3 34 82.4
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 8.0e-06 54.3 128 39.1
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 8.0e-06 54.3 129 38.0
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 8.0e-06 54.3 34 79.4


User provided reference genes

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