Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 7.4e-92 340.5 169 100.0
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 5.9e-81 304.3 169 88.8
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 1.9e-79 299.3 171 87.7
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 1.6e-78 296.2 170 87.1
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.1e-70 269.2 156 82.1
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 6.1e-70 267.7 157 81.5
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.8e-69 266.2 153 83.0
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 6.7e-69 264.2 166 78.3
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 6.7e-69 264.2 161 79.5
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.5e-68 263.1 154 83.1
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 2.0e-68 262.7 158 79.1
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 4.4e-68 261.5 153 82.4
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.3e-67 260.0 152 82.2
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 2.8e-67 258.8 169 76.9
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.7e-67 258.5 161 80.1
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 6.3e-67 257.7 163 77.9
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 8.2e-67 257.3 163 79.1
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 8.2e-67 257.3 170 74.1
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 1.8e-66 256.1 163 79.1
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 9.1e-66 253.8 154 79.2
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 9.1e-66 253.8 163 77.9
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 3.5e-65 251.9 153 78.4
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 5.9e-65 251.1 154 79.2
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.0e-64 250.4 155 76.1
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.0e-64 250.4 152 78.3
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.7e-64 249.6 160 74.4
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 1.7e-64 249.6 153 79.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.2e-64 249.2 154 78.6
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 5.0e-64 248.1 152 77.6
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 5.0e-64 248.1 153 78.4
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 6.5e-64 247.7 168 72.0
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 8.5e-64 247.3 170 72.9
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 1.1e-63 246.9 166 74.7
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.1e-63 246.9 154 75.3
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 2.5e-63 245.7 169 72.2
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 3.2e-63 245.4 153 76.5
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.2e-63 245.4 154 74.7
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.2e-63 245.4 163 74.2
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 4.2e-63 245.0 152 78.9
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 4.2e-63 245.0 163 74.2
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 9.4e-63 243.8 171 70.2
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 9.4e-63 243.8 171 70.2
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 2.1e-62 242.7 154 74.0
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 3.6e-62 241.9 161 74.5
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 8.0e-62 240.7 154 76.6
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.0e-61 240.4 158 75.9
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.0e-61 240.4 158 75.9
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.0e-61 240.4 163 74.8
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 3.0e-61 238.8 160 74.4
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.0e-61 238.8 187 64.7
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 3.9e-61 238.4 164 73.8
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 5.2e-61 238.0 158 73.4
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 5.2e-61 238.0 160 70.6
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.1e-60 236.9 163 73.0
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.6e-60 235.7 156 73.7
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.3e-60 235.3 210 61.0
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 4.4e-60 235.0 158 74.7
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 5.7e-60 234.6 153 75.2
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.3e-59 233.4 159 72.3
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.7e-59 233.0 158 71.5
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.2e-59 232.6 158 71.5
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 2.2e-59 232.6 164 72.0
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 2.8e-59 232.3 158 72.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 2.8e-59 232.3 153 73.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 2.8e-59 232.3 164 70.7
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.8e-59 231.5 156 73.1
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 6.3e-59 231.1 154 74.0
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 8.2e-59 230.7 153 73.2
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.1e-58 230.3 158 70.3
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.1e-58 230.3 154 74.0
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.4e-58 229.9 158 70.3
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.8e-58 229.6 153 73.2
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 3.1e-58 228.8 238 53.8
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 5.3e-58 228.0 151 72.8
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 7.0e-58 227.6 167 66.5
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 9.1e-58 227.3 158 69.6
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.6e-57 226.5 158 68.4
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.5e-57 225.3 156 70.5
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 4.5e-57 224.9 158 69.6
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 5.9e-57 224.6 151 69.5
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 6.5e-56 221.1 178 64.6
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 2.1e-54 216.1 133 79.7
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 2.1e-54 216.1 173 66.5
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 4.7e-54 214.9 167 65.9
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 3.0e-53 212.2 167 67.7
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 3.0e-53 212.2 163 66.3
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.4e-50 202.6 151 66.2
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 9.1e-50 200.7 150 63.3
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 2.7e-49 199.1 120 79.2
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 3.5e-49 198.7 115 81.7
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 5.9e-49 198.0 123 79.7
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 7.7e-49 197.6 114 81.6
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.2e-47 192.2 155 63.9
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 6.8e-45 184.5 118 73.7
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-41 173.7 108 80.6
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 6.6e-40 167.9 110 75.5
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 8.6e-40 167.5 154 59.1
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 4.0e-37 158.7 90 83.3
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 5.7e-36 154.8 90 77.8
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.2e-26 122.5 161 44.1
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.0e-25 119.8 75 76.0
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 3.2e-18 95.9 63 73.0
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 7.3e-15 84.7 61 70.5
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.4e-13 80.5 86 53.5
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.4e-13 80.5 81 60.5
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 4.4e-12 75.5 50 70.0


User provided reference genes

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