Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001458 Sechium edule HOM05D005860 ORTHO05D006977 3.8e-58 228.0 119 100.0
Sed0015041 Sechium edule HOM05D005860 ORTHO05D006977 5.3e-44 181.0 117 84.6
ClCG01G016270 Citrullus lanatus HOM05D005860 ORTHO05D006977 3.4e-35 151.8 117 73.5
Sed0023405 Sechium edule HOM05D005860 ORTHO05D006977 7.1e-33 144.1 117 68.4
MELO3C007497.2 Cucumis melo HOM05D005860 ORTHO05D006977 3.7e-29 131.7 108 69.4
CsaV3_6G042570 Cucumis sativus L. HOM05D005860 ORTHO05D006977 5.3e-28 127.9 127 60.6
Haze_14838 Corylus avellana HOM05D005860 ORTHO05D006977 7.4e-22 107.5 108 59.3
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 6.3e-21 104.4 117 54.7
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 3.1e-20 102.1 123 52.0
TWI56G1326 Tripterygium wilfordii HOM05D005860 ORTHO05D006977 9.0e-20 100.5 117 47.9
Eucgr.J02311 Eucalyptus grandis HOM05D005860 ORTHO05D006977 1.2e-19 100.1 118 53.4
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 2.6e-19 99.0 117 50.4
CANSAT64G0040 Cannabis sativa HOM05D005860 ORTHO05D006977 3.4e-19 98.6 117 51.3
Oeu050423.1 Olea europaea HOM05D005860 ORTHO05D006977 4.5e-19 98.2 114 51.8
Cpa.g.sc171.37 Carica papaya HOM05D005860 ORTHO05D006977 2.2e-18 95.9 117 51.3
COL.COLO4_03595 Corchorus olitorius HOM05D005860 ORTHO05D006977 2.2e-18 95.9 103 55.3
CSS0015596 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 2.9e-18 95.5 117 49.6
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 3.8e-18 95.1 93 61.3
FvH4_6g53060 Fragaria vesca HOM05D005860 ORTHO05D006977 3.8e-18 95.1 89 59.6
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 3.8e-18 95.1 89 59.6
CAN.G473.79 Capsicum annuum HOM05D005860 ORTHO05D006977 5.0e-18 94.7 104 52.9
MD17G1015100 Malus domestica HOM05D005860 ORTHO05D006977 5.0e-18 94.7 117 51.3
Atru.chr4.382 Acer truncatum HOM05D005860 ORTHO05D006977 6.5e-18 94.4 121 50.4
FAN05G4081 Fragaria x ananassa HOM05D005860 ORTHO05D006977 6.5e-18 94.4 89 58.4
FAN09G0694 Fragaria x ananassa HOM05D005860 ORTHO05D006977 6.5e-18 94.4 93 57.0
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 6.5e-18 94.4 98 58.2
RcHm_v2.0_Chr2g0174841 Rosa chinensis HOM05D005860 ORTHO05D006977 8.5e-18 94.0 93 58.1
PGSC0003DMG400020220 Solanum tuberosum HOM05D005860 ORTHO05D006977 3.2e-17 92.0 108 49.1
Phvul.004G147000 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 4.2e-17 91.7 111 55.0
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 5.5e-17 91.3 118 48.3
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 5.5e-17 91.3 118 50.8
Hma1.2p1_1219F.1_g267900 Hydrangea macrophylla HOM05D005860 ORTHO05D006977 7.2e-17 90.9 118 50.0
Lj2g0013553 Lotus japonicus HOM05D005860 ORTHO05D006977 7.2e-17 90.9 92 62.0
Solyc02g093940.3 Solanum lycopersicum HOM05D005860 ORTHO05D006977 7.2e-17 90.9 108 49.1
Sopen02g038590 Solanum pennellii HOM05D005860 ORTHO05D006977 7.2e-17 90.9 108 49.1
VMungo0464G0018 Vigna mungo HOM05D005860 ORTHO05D006977 7.2e-17 90.9 87 65.5
Oeu058768.1 Olea europaea HOM05D005860 ORTHO05D006977 9.4e-17 90.5 93 55.9
PGR083G1804 Punica granatum HOM05D005860 ORTHO05D006977 1.2e-16 90.1 86 64.0
SalBow1G3206 Salvia bowleyana HOM05D005860 ORTHO05D006977 1.2e-16 90.1 109 49.5
SalBow7G2829 Salvia bowleyana HOM05D005860 ORTHO05D006977 1.2e-16 90.1 109 49.5
CSS0028115 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 1.6e-16 89.7 97 54.6
Ciclev10011572m.g Citrus clementina HOM05D005860 ORTHO05D006977 1.6e-16 89.7 117 48.7
Nitab4.5_0009757g0020 Nicotiana tabacum HOM05D005860 ORTHO05D006977 2.7e-16 89.0 92 55.4
Duzib116G0811 Durio zibethinus HOM05D005860 ORTHO05D006977 3.6e-16 88.6 88 60.2
Nn4g22386 Nelumbo nucifera HOM05D005860 ORTHO05D006977 3.6e-16 88.6 117 49.6
Haze_00763 Corylus avellana HOM05D005860 ORTHO05D006977 4.6e-16 88.2 83 62.7
Peaxi162Scf00420g00442 Petunia axillaris HOM05D005860 ORTHO05D006977 4.6e-16 88.2 93 52.7
Glyma.09G171700 Glycine max HOM05D005860 ORTHO05D006977 6.1e-16 87.8 87 63.2
TAR629G2046 Trochodendron aralioides HOM05D005860 ORTHO05D006977 7.9e-16 87.4 93 55.9
Nitab4.5_0002887g0110 Nicotiana tabacum HOM05D005860 ORTHO05D006977 1.0e-15 87.0 93 53.8
Migut.K01447 Erythranthe guttata HOM05D005860 ORTHO05D006977 2.3e-15 85.9 111 49.5
Glyma.05G075600 Glycine max HOM05D005860 ORTHO05D006977 2.3e-15 85.9 96 58.3
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 3.9e-15 85.1 75 64.0
Sabra17G0063700 Salix brachista HOM05D005860 ORTHO05D006977 3.9e-15 85.1 112 50.0
TPR.G5727 Trifolium pratense HOM05D001503 ORTHO05D003820 5.1e-15 84.7 82 62.2
Sc16g0003100 Simmondsia chinensis HOM05D005860 ORTHO05D006977 1.1e-14 83.6 114 49.1
arahy.Tifrunner.gnm1.ann1.WZ54PF Arachis hypogaea HOM05D005860 ORTHO05D006977 2.0e-14 82.8 102 54.9
arahy.Tifrunner.gnm1.ann1.SB3XQV Arachis hypogaea HOM05D005860 ORTHO05D006977 2.5e-14 82.4 102 54.9
Lj7A609T51 Lonicera japonica HOM05D005860 ORTHO05D006977 2.5e-14 82.4 88 54.5
Phvul.004G055500 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 2.5e-14 82.4 90 58.9
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 3.3e-14 82.0 75 62.7
Glyma.19G075100 Glycine max HOM05D005860 ORTHO05D006977 3.3e-14 82.0 87 60.9
unitig_0.g543 Utricularia gibba HOM05D005860 ORTHO05D006977 3.3e-14 82.0 90 52.2
Rhsim08G0044800 Rhododendron simsii HOM05D005860 ORTHO05D006977 7.4e-14 80.9 113 46.9
Psat1g161720 Pisum sativum HOM05D005860 ORTHO05D006977 9.7e-14 80.5 90 54.4
Aqoxy5G03469 Aquilegia oxysepala HOM05D005860 ORTHO05D006977 2.2e-13 79.3 99 51.5
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 2.2e-13 79.3 75 60.0
Rhsim08G0044400 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.2e-13 79.3 95 49.5
Potri.017G067600 Populus trichocarpa HOM05D005860 ORTHO05D006977 2.8e-13 79.0 101 52.5
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 4.8e-13 78.2 86 54.7
ATR0686G114 Amborella trichopoda HOM05D005860 ORTHO05D006977 6.3e-13 77.8 89 51.7
DCAR_021767 Daucus carota HOM05D005860 ORTHO05D006977 6.3e-13 77.8 72 62.5
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 6.3e-13 77.8 75 58.7
Medtr2g034600 Medicago truncatula HOM05D005860 ORTHO05D006977 1.1e-12 77.0 81 58.0
Lalb_Chr02g0157831 Lupinus albus HOM05D005860 ORTHO05D006977 1.4e-12 76.6 119 45.4
Rhsim08G0044700 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.4e-12 76.6 112 43.8
THA.LOC104825612 Tarenaya hassleriana HOM05D005860 ORTHO05D006977 1.4e-12 76.6 120 44.2
vmacro18330 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.4e-12 76.6 109 42.2
Rhsim08G0045000 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.4e-12 75.9 112 47.3
Cc02_g00900 Coffea canephora HOM05D005860 ORTHO05D006977 4.1e-12 75.1 94 48.9
Ah.03g142080 Amaranthus hybridus HOM05D005860 ORTHO05D006977 9.1e-12 73.9 59 72.9
Rhsim08G0044500 Rhododendron simsii HOM05D005860 ORTHO05D006977 9.1e-12 73.9 89 50.6
Migut.C00523 Erythranthe guttata HOM05D005860 ORTHO05D006977 1.2e-11 73.6 69 60.9
ECA232G2764 Erigeron canadensis HOM05D005860 ORTHO05D006977 1.5e-11 73.2 97 44.3
PSO782G4049 Papaver somniferum HOM05D005860 ORTHO05D006977 2.6e-11 72.4 111 42.3
CDE09G0687 Ceratophyllum demersum HOM05D005860 ORTHO05D006977 4.5e-11 71.6 82 53.7
SGA_v2.0_scaffold7G03541 Striga asiatica HOM05D005860 ORTHO05D006977 5.9e-11 71.2 67 58.2
Hund24045 Selenicereus undatus HOM05D005860 ORTHO05D006977 7.7e-11 70.9 65 61.5
PSO017G5933 Papaver somniferum HOM05D005860 ORTHO05D006977 1.0e-10 70.5 67 59.7
EL10Ac1g02122 Beta vulgaris HOM05D005860 ORTHO05D006977 1.3e-10 70.1 75 57.3
PSO063G3212 Papaver somniferum HOM05D005860 ORTHO05D006977 1.3e-10 70.1 72 54.2
PSO478G3943 Papaver somniferum HOM05D005860 ORTHO05D006977 1.3e-10 70.1 102 48.0
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 1.7e-10 69.7 63 61.9
HPP92_024251 Vanilla planifolia HOM05D005860 ORTHO05D006977 1.7e-10 69.7 92 41.3
HanXRQChr15g0486891 Helianthus annuus HOM05D005860 ORTHO05D006977 2.2e-10 69.3 93 44.1
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 2.9e-10 68.9 63 60.3
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 5.0e-10 68.2 63 58.7
AUR62043070 Chenopodium quinoa HOM05D005860 ORTHO05D006977 5.0e-10 68.2 75 58.7
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 6.5e-10 67.8 63 58.7
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 6.5e-10 67.8 63 58.7
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 6.5e-10 67.8 63 58.7
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 6.5e-10 67.8 63 58.7
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 6.5e-10 67.8 63 58.7
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 8.5e-10 67.4 63 60.3
AUR62032474 Chenopodium quinoa HOM05D005860 ORTHO05D006977 1.4e-09 66.6 75 57.3
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 2.5e-09 65.9 63 57.1
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 4.2e-09 65.1 89 48.3
vmacro18326 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 4.2e-09 65.1 93 46.2
CiPaw.01G128900 Carya illinoinensis HOM05D005860 ORTHO05D006977 5.5e-09 64.7 106 40.6
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 7.2e-09 64.3 67 53.7
Lju41A50T54 Lonicera japonica HOM05D005860 ORTHO05D006977 7.2e-09 64.3 59 62.7
vmacro18328 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 1.6e-08 63.2 84 50.0
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 3.6e-08 62.0 63 54.0
Zm00001eb246440 Zea mays HOM05D005860 ORTHO05D006977 1.1e-06 57.0 84 46.4
Cfa015733 Carpinus fangiana HOM05D005860 ORTHO05D006977 3.3e-06 55.5 44 70.5


User provided reference genes

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