Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 1.2e-189 666.4 345 100.0
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 1.8e-177 625.9 345 92.8
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 7.1e-174 614.0 346 91.9
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 1.3e-167 593.2 345 89.3
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 2.1e-149 532.7 341 79.2
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 3.5e-149 531.9 341 78.3
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 1.0e-148 530.4 341 79.2
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 1.0e-148 530.4 341 79.2
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 1.9e-147 526.2 344 78.8
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 4.3e-147 525.0 341 79.2
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.6e-147 524.6 343 77.8
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.6e-147 524.6 343 77.8
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 6.2e-146 521.2 345 76.5
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 6.2e-146 521.2 343 77.6
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 8.1e-146 520.8 341 78.0
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 8.1e-146 520.8 343 77.6
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 2.4e-145 519.2 341 77.1
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 4.0e-145 518.5 341 77.1
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 5.3e-145 518.1 342 77.8
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 2.0e-144 516.2 341 76.5
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.6e-144 515.8 341 76.5
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 5.8e-144 514.6 341 76.2
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 5.8e-144 514.6 344 77.0
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 2.2e-143 512.7 341 76.0
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 2.2e-143 512.7 344 77.3
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 3.8e-143 511.9 344 78.2
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 3.8e-143 511.9 342 75.7
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 4.9e-143 511.5 341 75.4
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 4.9e-143 511.5 348 77.3
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 6.4e-143 511.1 341 75.4
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 6.4e-143 511.1 341 77.1
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 6.4e-143 511.1 342 77.8
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 8.4e-143 510.8 341 74.8
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 1.4e-142 510.0 341 74.8
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.4e-142 510.0 341 76.2
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 1.4e-142 510.0 343 74.6
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 1.4e-142 510.0 341 75.7
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 1.9e-142 509.6 341 76.0
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 1.9e-142 509.6 345 75.4
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 2.4e-142 509.2 341 76.5
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 2.4e-142 509.2 341 75.1
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 3.2e-142 508.8 341 75.4
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 5.5e-142 508.1 341 74.2
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 5.5e-142 508.1 341 76.0
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 9.3e-142 507.3 344 75.9
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 1.2e-141 506.9 341 77.1
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 2.1e-141 506.1 345 74.8
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 2.1e-141 506.1 338 76.6
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 2.1e-141 506.1 338 76.6
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 4.6e-141 505.0 343 75.5
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 4.6e-141 505.0 341 76.0
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 6.0e-141 504.6 345 74.5
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 1.0e-140 503.8 336 73.2
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 1.0e-140 503.8 341 74.8
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 1.8e-140 503.1 342 74.9
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 1.8e-140 503.1 345 74.5
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 2.3e-140 502.7 341 73.9
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 2.3e-140 502.7 341 73.9
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 2.3e-140 502.7 341 73.3
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 2.3e-140 502.7 343 74.9
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 6.7e-140 501.1 341 73.6
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 6.7e-140 501.1 341 73.6
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 6.7e-140 501.1 341 73.6
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 6.7e-140 501.1 353 72.2
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 6.7e-140 501.1 341 73.9
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 8.7e-140 500.7 341 74.2
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 8.7e-140 500.7 341 73.6
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 8.7e-140 500.7 325 78.5
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 1.1e-139 500.4 341 73.9
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 1.1e-139 500.4 343 74.6
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 1.5e-139 500.0 341 73.9
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 2.5e-139 499.2 344 76.2
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 3.3e-139 498.8 343 74.3
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 2.8e-138 495.7 333 76.6
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 2.8e-138 495.7 341 73.6
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 4.8e-138 495.0 344 75.9
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 2.4e-137 492.7 347 72.6
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 1.5e-136 490.0 353 70.8
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 2.0e-136 489.6 392 67.3
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 2.6e-136 489.2 337 73.6
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 1.3e-135 486.9 309 77.3
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 4.9e-135 485.0 341 73.6
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 6.5e-135 484.6 344 75.3
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 8.4e-135 484.2 344 75.6
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 5.5e-134 481.5 354 70.3
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 9.3e-134 480.7 345 71.6
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 5.1e-132 474.9 336 69.9
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 8.7e-132 474.2 365 69.0
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 8.2e-130 467.6 272 84.9
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 4.5e-128 461.8 341 70.4
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 1.3e-127 460.3 411 61.6
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 5.5e-126 454.9 304 73.7
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 9.3e-126 454.1 272 80.9
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 3.0e-124 449.1 312 76.3
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.1e-123 447.2 307 76.9
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 1.8e-121 439.9 250 92.0
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 6.9e-121 438.0 341 67.7
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 9.1e-121 437.6 341 68.3
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 1.3e-119 433.7 341 68.0
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 1.7e-119 433.3 332 69.0
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 1.7e-119 433.3 338 66.3
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 9.4e-118 427.6 395 61.8
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 2.0e-115 419.9 291 75.9
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 8.5e-111 404.4 341 63.0
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 1.1e-110 404.1 328 66.5
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 3.2e-110 402.5 341 63.3
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 1.2e-109 400.6 414 55.6
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 1.4e-105 387.1 290 70.3
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 6.5e-103 378.3 222 82.0
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 4.2e-102 375.6 222 84.7
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 9.7e-99 364.4 341 58.9
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 4.2e-94 349.0 341 58.1
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 3.6e-93 345.9 382 52.1
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 4.8e-90 335.5 204 81.4
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 9.8e-83 311.2 435 46.2
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 7.8e-80 301.6 329 49.8
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 5.0e-79 298.9 169 86.4
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.1e-78 297.7 342 50.9
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 3.4e-75 286.2 245 63.3
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 1.4e-73 280.8 249 62.2
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.9e-70 270.4 255 58.4
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 2.1e-69 266.9 198 69.7
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 2.4e-65 253.4 303 44.2
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 1.0e-55 221.5 238 56.3
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 3.3e-54 216.5 144 72.2
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 4.3e-54 216.1 144 76.4
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 4.0e-52 209.5 194 57.7
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 6.0e-48 195.7 353 36.0
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 2.3e-47 193.7 161 64.6
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.7e-45 186.0 131 74.8
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 1.8e-44 184.1 180 57.8
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.2e-42 177.2 110 80.0
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 1.3e-39 167.9 322 33.5
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 3.0e-39 166.8 335 33.1
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 4.3e-38 162.9 312 33.7
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 3.0e-31 140.2 132 59.1
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.6e-29 134.4 113 62.8
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 1.4e-25 121.3 74 81.1
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 1.1e-20 105.1 102 60.8
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.6e-19 100.5 95 60.0
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 4.5e-19 99.8 73 67.1
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.5e-17 94.0 91 57.1
MD01G1007700 Malus domestica HOM05D005314 ORTHO05D246798 5.7e-06 56.2 31 87.1


User provided reference genes

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